| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF004J16 | Sequence | 343 | 009404 (8) | ref|XP_006355656.1| | 2e-33 | PREDICTED: coronatine-insensitive protein 1-like [Solanum tuberosum] | |||||
| JMSF012L14 | Sequence | 198 | 009404 (8) | 721 | 005822 (7) | gb|AAR87848.1| | 1e-81 | coronatine-insensitive 1 [Nicotiana tabacum] | |||
| JMSF028A16 | Sequence | 679 | 009404 (8) | ref|NP_001234464.1| | 2e-83 | coronatine-insensitive 1 [Solanum lycopersicum] gb|AAR82925.1| coronatine-insens | 779 | 005822 (7) | gb|AAR87848.1| | 5e-88 | coronatine-insensitive 1 [Nicotiana tabacum] |
| JMSF029O15 | Sequence | 692 | 009404 (8) | ref|XP_006355656.1| | 4e-67 | PREDICTED: coronatine-insensitive protein 1-like [Solanum tuberosum] | 725 | 005822 (7) | gb|AAR87848.1| | 2e-80 | coronatine-insensitive 1 [Nicotiana tabacum] |
| JMSF030F10 | Sequence | 659 | 009404 (8) | ref|XP_006355656.1| | 3e-24 | PREDICTED: coronatine-insensitive protein 1-like [Solanum tuberosum] | 715 | 005822 (7) | gb|AAR87848.1| | 1e-81 | coronatine-insensitive 1 [Nicotiana tabacum] |
| JMSF034E13 | Sequence | 689 | 009404 (8) | ref|XP_006355656.1| | 7e-87 | PREDICTED: coronatine-insensitive protein 1-like [Solanum tuberosum] | |||||
| JMSF034I07 | Sequence | 690 | 009404 (8) | ref|XP_006355656.1| | 3e-41 | PREDICTED: coronatine-insensitive protein 1-like [Solanum tuberosum] | 797 | 005822 (7) | gb|AAR87848.1| | 1e-103 | coronatine-insensitive 1 [Nicotiana tabacum] |
| JMSF047E22 | Sequence | 696 | 009404 (8) | ref|XP_006355656.1| | 9e-74 | PREDICTED: coronatine-insensitive protein 1-like [Solanum tuberosum] | 751 | 005822 (7) | gb|AAR87848.1| | 5e-86 | coronatine-insensitive 1 [Nicotiana tabacum] |
This contig is upended
. : . : . : . : . : . :
JMSF034E13+ TCAGTCACAGCGCTCTTTTCAAGA
____________________________________________________________
consensus TCAGTCACAGCGCTCTTTTCAAGA
. : . : . : . : . : . :
JMSF034E13+ ACCAGTGTTCTTAGGTTCCTGCAGNAACGGCAAATATGTAAAAGGCCGTCGGTGGAAAAT
JMSF028A16+ GTTCCTGCAGGAACGGCAAATATGTAAAAGGCCGTCGGTGGAAAAT
____________________________________________________________
consensus ACCAGTGTTCTTAGGTTCCTGCAGGAACGGCAAATATGTAAAAGGCCGTCGGTGGAAAAT
. : . : . : . : . : . :
JMSF034E13+ CCAGAGCACTTATCGAGCNTGAGAACCTGAAGCAGATTGGTACGAGTACGGGCAAGCATT
JMSF028A16+ CCAGAGCACTTATCGAGCTTGAGAACCTGAAGCAGATTGGTACGAGTACGGGCAAGCATT
JMSF047E22+ TGAGAACCTGAAGCAGATTGGTACGAGTACGGGCAAGCATT
JMSF029O15+ TGAGAACCTGAAGCAGATTGGTACGAGTACGGGCAAGCATT
____________________________________________________________
consensus CCAGAGCACTTATCGAGCTTGAGAACCTGAAGCAGATTGGTACGAGTACGGGCAAGCATT
. : . : . : . : . : . :
JMSF034E13+ TCTAGATCCGCATCCGTGACAATCATTCGACGGAAGTGAAGCGTATTTAGCTGAGGAAAG
JMSF028A16+ TCTAGATCCGCATCCGTGACAATCATTCGACGGAAGTGAAGCGTATTTAGCTGAGGAAAG
JMSF047E22+ TCTAGATCCGCATCCGTGACAATCATTCGACGGAAGTGAAGCGTATTTAGCTGAGGAAAG
JMSF029O15+ TCTAGATCCGCATCCGTGACAATCATTCGACGGAAGTGAAGCGTATTTAGCTGAGGAAAG
____________________________________________________________
consensus TCTAGATCCGCATCCGTGACAATCATTCGACGGAAGTGAAGCGTATTTAGCTGAGGAAAG
. : . : . : . : . : . :
JMSF034E13+ GAGCGGGAAATCTCCTCCAGCCAGGGGGTGACGTAGCCGCCCCAGTTCTCCGGGATGAGG
JMSF028A16+ GAGCGGGAAATCTCCTCCAGCCAGGGGGTGACGTAGCCGCCCCAGTTCTCCGGGATGAGG
JMSF047E22+ GAGCGGGAAATCTCCTCCAGCCAGGGGGTGACGTAGCCGCCCCAGTTCTCCGGGATGAGG
JMSF029O15+ GAGCGGGAAATCTCCTCCAGCCAGGGGGTGACGTAGCCGCCCCAGTTCTCCGGGATGAGG
JMSF034I07+ TCCGGGATGAGG
____________________________________________________________
consensus GAGCGGGAAATCTCCTCCAGCCAGGGGGTGACGTAGCCGCCCCAGTTCTCCGGGATGAGG
. : . : . : . : . : . :
JMSF034E13+ CTGAACATGGCGGCGCGTGGCTTGCCCTTGAGCTTGAGTGAGCGGAGATGGGGGAAGCGG
JMSF004J16+ TGAGCTTGAGTGAGCGGAGATGGGGGAAGCGG
JMSF028A16+ CTGAACATGGCGGCGCGTGGCTTGCCCTTGAGCTTGAGTGAGCGGAGATGGGGGAAGCGG
JMSF047E22+ CTGAACATGGCGGCGCGTGGCTTGCCCTTGAGCTTGAGTGAGCGGAGATGGGGGAAGCGG
JMSF029O15+ CTGAACATGGCGGCGCGTGGCTTGCCCTTGAGCTTGAGTGAGCGGAGATGGGGGAAGCGG
JMSF034I07+ CTGAACATGGCGGCGCGTGGCTTGCCCTTGAGCTTGAGTGAGCGGAGATGGGGGAAGCGG
____________________________________________________________
consensus CTGAACATGGCGGCGCGTGGCTTGCCCTTGAGCTTGAGTGAGCGGAGATGGGGGAAGCGG
. : . : . : . : . : . :
JMSF034E13+ CGGGAGAGCTGCTGCGGTGTGGCGGTGTAGCAGAAAGCCATGGTCACATGTTTCCTAGTG
JMSF004J16+ CGGGAGAGCTGCTGCGGTGTGGCGGTGTAGCAGAAAGCCATGGTCACATGTTTCCTAGTG
JMSF028A16+ CGGGAGAGCTGCTGCGGTGTGGCGGTGTAGCAGAAAGCCATGGTCACATGTTTCCTAGTG
JMSF047E22+ CGGGAGAGCTGCTGCGGTGTGGCGGTGTAGCAGAAAGCCATGGTCACATGTTTCCTAGTG
JMSF029O15+ CGGGAGAGCTGCTGCGGTGTGGCGGTGTAGCAGAAAGCCATGGTCACATGTTTCCTAGTG
JMSF034I07+ CGGGAGAGCTGCTGCGGTGTGGCGGTGTAGCAGAAAGCCATGGTCACATGTTTCCTAGTG
JMSF030F10+ GGGAGAGCTGCTGCGGTGTGGCGGTGTAGCAGAAAGCCATGGTCACATGTTTCCTAGTG
____________________________________________________________
consensus CGGGAGAGCTGCTGCGGTGTGGCGGTGTAGCAGAAAGCCATGGTCACATGTTTCCTAGTG
. : . : . : . : . : . :
JMSF034E13+ ACGGCGTCGATCTCGTACCACCTCCGGCACACCAGCGACACCGCGTCGCGGTCACGCGAC
JMSF004J16+ ACGGCGTCGATCTCGTACCACCTCCGGCACACCAGCGACACCGCGTCGCGGTCACGCGAC
JMSF028A16+ ACGGCGTCGATCTCGTACCACCTCCGGCACACCAGCGACACCGCGTCGCGGTCACGCGAC
JMSF047E22+ ACGGCGTCGATCTCGTACCACCTCCGGCACACCAGCGACACCGCGTCGCGGTCACGCGAC
JMSF029O15+ ACGGCGTCGATCTCGTACCACCTCCGGCACACCAGCGACACCGCGTCGCGGTCACGCGAC
JMSF034I07+ ACGGCGTCGATCTCGTACCACCTCCGGCACACCAGCGACACCGCGTCGCGGTCACGCGAC
JMSF030F10+ ACGGCGTCGATCTCGTACCACNTCCGGCACACCAGCGACACCGCGTCGCGGTCACGCGAC
____________________________________________________________
consensus ACGGCGTCGATCTCGTACCACCTCCGGCACACCAGCGACACCGCGTCGCGGTCACGCGAC
. : . : . : . : . : . :
JMSF034E13+ TCCTGGATGTAAGGTATAACGCACTCCCACACAGTATCATACTCGCCACCCATCCTCGTC
JMSF004J16+ TCCTGGATGTAAGGTATAACGCACTCCCACACAGTATCATACTCGCCACCCATCCTCGTC
JMSF028A16+ TCCTGGATGTAAGGTATAACGCACTCCCACACAGTATCATACTCGCCACCCATCCTCGTC
JMSF047E22+ TCCTGGATGTAAGGTATAACGCACTCCCACACAGTATCATACTCGCCACCCATCCTCGTC
JMSF029O15+ TCCTGGATGTAAGGCATAACGCACTCCCACACAGTATCATACTCGCCACCCATCCTCGTC
JMSF034I07+ TCCTGGATGTAAGGTATAACGCACTCCCACACAGTATCATACTCGCCACCCATCCTCGTC
JMSF030F10+ TCCTGGATGTAAGGTATAACGCACTCCCACACAGTATCATACTCGCCACCCATCCTCGTC
____________________________________________________________
consensus TCCTGGATGTAAGGTATAACGCACTCCCACACAGTATCATACTCGCCACCCATCCTCGTC
. : . : . : . : . : . :
JMSF034E13+ GGGTTTCTCTCCTCCATATATTTTCCGCT
JMSF004J16+ GGATTTCTCTCCTCCATATATTTTCCGCT
JMSF028A16+ GGATTTCTCTCCTCCATATATTTTCCGCTGCAAAGATAATCAGATTTTCGAGTCAACGCT
JMSF047E22+ GGATTTCTCTCCTCCATATATTTTCCGCTGCAAAGATAATCAGATTTTCGAGTCAACGCT
JMSF029O15+ GGATTTCTCTCCTCCATATATTTTCCGCTGCAAAGATAATCAGATTTTCGAGTCAACGCT
JMSF034I07+ GGATTTCTCTCCTCCATATATTTTCCGCTGCAAAGATAATCAGATTTTCGAGTCAACGCT
JMSF030F10+ GGATTTCTCTCCTCCATATATTTTCCGCTGCAAAGATAATCAGATTTTCGAGTCAACGCT
____________________________________________________________
consensus GGATTTCTCTCCTCCATATATTTTCCGCTGCAAAGATAATCAGATTTTCGAGTCAACGCT
. : . : . : . : . : . :
JMSF028A16+ AGAACTATAGAAACAAGAACGGAAGAAATCGCACGGCGAACGGCGGAACCTCAACGAAGA
JMSF047E22+ AGAACTATAGAAACAAGAACGGAAGAAATCGCACGGCGAACGGCGGAACCTCAACGAAGA
JMSF029O15+ AGAACTATAGAAACAAGAACGGAAGAAATCGCACGGCGAACGGCGGAACCTCAACGAAGA
JMSF034I07+ AGAACTATAGAAACAAGAACGGAAGAAATCGCACGGCGAACGGCGGAACCTCAACGAAGA
JMSF030F10+ AGAACTATAGAAACAAGAACGGAAGAAATCGCACGGCGAACGGCGGAACCTCAACGAAGA
____________________________________________________________
consensus AGAACTATAGAAACAAGAACGGAAGAAATCGCACGGCGAACGGCGGAACCTCAACGAAGA
. : . : . : . : . : . :
JMSF028A16+ ACAGGAAGGCACATGAATCCGGCCTTAGCACTAGACACTATACAGATTGAGCAAACTTCA
JMSF047E22+ ACAGGAAGGCACATGAATCCGGCCTTAGCACTAGACACTATACAGATTGAGCAAACTTCA
JMSF029O15+ ACAGGAAGGCACATGAATCCGGCCTTAGCACTAGACACTATACAGATTGAGCAAACTTCA
JMSF034I07+ ACAGGAAGGCACATGAATCCGGCCTTAGCACTAGACACTATACAGATTGAGCAAACTTCA
JMSF030F10+ ACAGGAAGGCACATGAATCCGGCCTTAGCACTAGACACTATACAGATTGAGCAAACTTCA
____________________________________________________________
consensus ACAGGAAGGCACATGAATCCGGCCTTAGCACTAGACACTATACAGATTGAGCAAACTTCA
. : . : . : . : . : . :
JMSF028A16+ ATTATTAGTCGCGTAGACTTTTTGCAGAAGCT
JMSF047E22+ ATTATTAGTCGCGTAGACTTTTTGCAGAAGCTTTTTCTCATGCTGTCGTCTTGGAGCTTT
JMSF029O15+ ATTATTAGTCGCGTAGACTTTTTGCAGAAGCTTTTTCTCATGCTGTCGTCTTGGAGCTTT
JMSF034I07+ ATTATTAGTCGCGTAGACTTTTTGCAGAAGCTTTTTCTCATGCTGTCGTCTTGGAGCTTT
JMSF030F10+ ATTATTAGTCGCGTAGACTTTTTGCAGAAGCTTTTTCTCATGCTGTCGTCTTGGAGCTTT
____________________________________________________________
consensus ATTATTAGTCGCGTAGACTTTTTGCAGAAGCTTTTTCTCATGCTGTCGTCTTGGAGCTTT
. : . : . : . : . : . :
JMSF047E22+ TTTATTTCATCGCTGGCCAGTGGCTTGGC
JMSF029O15+ TTTATTTCATCGCTGGCCAGTGGCTTGGC
JMSF034I07+ TTTATTTCATCGCTGGCCAGTGGCTTGGCTTCATACCCACTGTACGTGTGTTAATTATAT
JMSF012L14+ TCATCGCTGGCCAGTGGCTTGGCTTCATACCCACTGTACGTGTGTTAATTATAT
JMSF030F10+ TTTATTTCATCGCTGGCCAGTGGCTTGGCTTCATACCCACTGTACGTGTGTTAATTATAT
____________________________________________________________
consensus TTTATTTCATCGCTGGCCAGTGGCTTGGCTTCATACCCACTGTACGTGTGTTAATTATAT
. : . : . : . : . : . :
JMSF034I07+ GCCACTTTCATTAATTTAATAGCATCCTACTGTTTAACACTCACACTTTGTCTGCTTACC
JMSF012L14+ GCCACTTTCATTAATTTAATAGCATCCTACTGTTTAACACTCACACTTTGTCTGCTTACC
JMSF030F10+ GCCACTTTCATTAATTTAATAGCATCCTACTGTTTAACACTCACACTTTGTCTGCTTACC
____________________________________________________________
consensus GCCACTTTCATTAATTTAATAGCATCCTACTGTTTAACACTCACACTTTGTCTGCTTACC
. : . : . : . : . : . :
JMSF034I07+ AGACTCCAATTTGGAGAGAACTTCTGCTGTTCCGGTCCTAGGATAGTAGAATCCGAGGCC
JMSF012L14+ AGACTCCAATTTGGAGAGAACTTCTGCTGTTCCGGTCCTAGGATAGTAGAATCCGAGGCC
JMSF030F10+ AGACTCCAATTTGGAGAGAACTTCTGCTGTTCCGGTCCTAGGATAGTAGAATCCGAGGCC
____________________________________________________________
consensus AGACTCCAATTTGGAGAGAACTTCTGCTGTTCCGGTCCTAGGATAGTAGAATCCGAGGCC
. : . : . : . : . : . :
JMSF034I07+ TTATCCACTCGTCCAGT
JMSF012L14+ TTATCCACTCGTCCAGT
JMSF030F10+ TTATCCACTCGTCCAGTGATTGCAGCAGGATAACAAAAATTGTTCTGTTTTATGCTTGCC
____________________________________________________________
consensus TTATCCACTCGTCCAGTGATTGCAGCAGGATAACAAAAATTGTTCTGTTTTATGCTTGCC