Contig 009401:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF030A13Sequence627009401 (2)ref|XP_006367776.1|9e-59PREDICTED: GDSL esterase/lipase At1g28590-like [Solanum tuberosum]737009401 (2)ref|XP_009629822.1|1e-108PREDICTED: GDSL esterase/lipase At1g28600-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF030A13-                                                        TGCTTTCATTATTG
                      ____________________________________________________________
consensus                                                           TGCTTTCATTATTG
 
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rJMSF030A13-          TTTCCTTACAATCTGATATTGTTGGGGCTTTAAGAATGCAAGCATCGCTGATACGAGGAG
                      ____________________________________________________________
consensus             TTTCCTTACAATCTGATATTGTTGGGGCTTTAAGAATGCAAGCATCGCTGATACGAGGAG
 
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rJMSF030A13-          TCATATATGTGCCTTTCAGTAAGCCATGTGCTATCCATTTATAAGCTGCTTCTGTAAGGT
                      ____________________________________________________________
consensus             TCATATATGTGCCTTTCAGTAAGCCATGTGCTATCCATTTATAAGCTGCTTCTGTAAGGT
 
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rJMSF030A13-          GTACGCCATCCCAGCTAACGTAAGACGAAGGATGTTCACAAACAGTAGATTCTGGAAGTT
                      ____________________________________________________________
consensus             GTACGCCATCCCAGCTAACGTAAGACGAAGGATGTTCACAAACAGTAGATTCTGGAAGTT
 
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rJMSF030A13-          TACAACCAACGTTGCTGTTGTAATTGTATGGACCTCCCACACCACAACATGCACTTATGG
                      ____________________________________________________________
consensus             TACAACCAACGTTGCTGTTGTAATTGTATGGACCTCCCACACCACAACATGCACTTATGG
 
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rJMSF030A13-          TGCTGTTAAATCCAAATTTTCTTGGAGAGTTATAGAACTCCATTGCTGCGTTGTAGTAAT
                      ____________________________________________________________
consensus             TGCTGTTAAATCCAAATTTTCTTGGAGAGTTATAGAACTCCATTGCTGCGTTGTAGTAAT
 
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rJMSF030A13-          CTGCATAAATTATGGTGGCATGAGGATGAAGTTCTCTGAGGCGATTAAGTGTTTCTTGAA
                      ____________________________________________________________
consensus             CTGCATAAATTATGGTGGCATGAGGATGAAGTTCTCTGAGGCGATTAAGTGTTTCTTGAA
 
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rJMSF030A13-          GAAGTTTGTTGTGATACTCAGCGAACTCATTTAGCCAATTAAGACAACCAGTTTTGGAGT
                      ____________________________________________________________
consensus             GAAGTTTGTTGTGATACTCAGCGAACTCATTTAGCCAATTAAGACAACCAGTTTTGGAGT
 
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rJMSF030A13-          CATAATAACTATCATTGGAACTCATAAATTCTGTTAAATAAGAAGGTGAACATCCAATTG
                      ____________________________________________________________
consensus             CATAATAACTATCATTGGAACTCATAAATTCTGTTAAATAAGAAGGTGAACATCCAATTG
 
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rJMSF030A13-          GTAGATTCCCCGGAACAACCAACGTTTCAGCTCCAAATTCAATCACTTCATTGATTGCTG
                      ____________________________________________________________
consensus             GTAGATTCCCCGGAACAACCAACGTTTCAGCTCCAAATTCAATCACTTCATTGATTGCTG
 
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rJMSF030A13-          ATGCAATGGTTGCAATAACTTTAGGAACCAAAGGTTTGACCTCTTCAATGGGAATGCCTT
                      ____________________________________________________________
consensus             ATGCAATGGTTGCAATAACTTTAGGAACCAAAGGTTTGACCTCTTCAATGGGAATGCCTT
 
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rJMSF030A13-          GCCAAAATGCACCATTGTAATCATTGCCTCCAATCTCCCCCATGAGAACCAGAGAACTTT
JMSF030A13+                                            TCTCCCCCATGAGAACCAGAGAACTTT
                      ____________________________________________________________
consensus             GCCAAAATGCACCATTGTAATCATTGCCTCCAATCTCCCCCATGAGAACCAGAGAACTTT
 
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rJMSF030A13-          GCAAATATTTCTTGCACTCAGATGGAGTGTTGCAAAATGTTTGTAGCATTTCCTTGAACC
JMSF030A13+           GCAAATATTTCTTGCACTCAGATGGAGTGTTGCAAAATGTTTGTAGCATTTCCTTGAACC
                      ____________________________________________________________
consensus             GCAAATATTTCTTGCACTCAGATGGAGTGTTGCAAAATGTTTGTAGCATTTCCTTGAACC
 
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rJMSF030A13-          AGT                                                         
JMSF030A13+           AGTTGAGCTGAGTTCCCAAAGAAGCATTTGATCCAGAAGGGTCTTCAATCCCCATGGCTG
                      ____________________________________________________________
consensus             AGTTGAGCTGAGTTCCCAAAGAAGCATTTGATCCAGAAGGGTCTTCAATCCCCATGGCTG
 
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JMSF030A13+           CCAATAATGAAGAATCCATTGCTGGACATCCAGCAATTGCAAAATTTACTCCCCCTATGA
                      ____________________________________________________________
consensus             CCAATAATGAAGAATCCATTGCTGGACATCCAGCAATTGCAAAATTTACTCCCCCTATGA
 
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JMSF030A13+           AATTGCTTTTGCTTGCGTTTTTCATCTCAATGTAGGGTGGTACAAATGGGAACCCCATAC
                      ____________________________________________________________
consensus             AATTGCTTTTGCTTGCGTTTTTCATCTCAATGTAGGGTGGTACAAATGGGAACCCCATAC
 
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JMSF030A13+           TTTGAGCAATGAAGTCGATGATGAGACGGCCGTCGGAGTACCGACCGGTGGGGCGATGGA
                      ____________________________________________________________
consensus             TTTGAGCAATGAAGTCGATGATGAGACGGCCGTCGGAGTACCGACCGGTGGGGCGATGGA
 
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JMSF030A13+           AGAAAGTTTCTCCGTAGGGAATTGCGGCGGCACTGGATCGGAAAAGATGAATTAAGTTGC
                      ____________________________________________________________
consensus             AGAAAGTTTCTCCGTAGGGAATTGCGGCGGCACTGGATCGGAAAAGATGAATTAAGTTGC
 
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JMSF030A13+           CTGTGTCGGCAAGAGAGTCGCCAAAACTAATGATGGATTCGTAACAACCTGAAGCCTGGA
                      ____________________________________________________________
consensus             CTGTGTCGGCAAGAGAGTCGCCAAAACTAATGATGGATTCGTAACAACCTGAAGCCTGGA
 
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JMSF030A13+           CACCTGAAGCAAGCAGAAAGATCAGGATACAAATCACTTTCATGGAAGAATCCATTGCAA
                      ____________________________________________________________
consensus             CACCTGAAGCAAGCAGAAAGATCAGGATACAAATCACTTTCATGGAAGAATCCATTGCAA
 
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JMSF030A13+           ACGGAAATAAGTTGCTTTGCAGAGAATGCTAAGCGTGTTTATGATGTGAATATAAGTCTG
                      ____________________________________________________________
consensus             ACGGAAATAAGTTGCTTTGCAGAGAATGCTAAGCGTGTTTATGATGTGAATATAAGTCTG
 
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JMSF030A13+           CTACTTTATATACTACATGGGCAACAGGCAGTATACTACATGGGCAACAGCCAACAGGCC
                      ____________________________________________________________
consensus             CTACTTTATATACTACATGGGCAACAGGCAGTATACTACATGGGCAACAGCCAACAGGCC