Contig 009400:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009A20Sequence282009400 (2)ref|XP_006350216.1|8e-10PREDICTED: translation factor GUF1 homolog, chloroplastic-like [Solanum tuberos816013896 (2)dbj|BAJ33885.1|1e-115unnamed protein product [Thellungiella halophila]
JMSF029P03Sequence607009400 (2)ref|XP_009605439.1|3e-81PREDICTED: translation factor GUF1 homolog, chloroplastic {ECO:0000255|HAMAP-Rul709013896 (2)ref|XP_008393921.1|2e-91PREDICTED: translation factor GUF1 homolog, chloroplastic [Malus domestica]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF029P03+ GAGCTTC
                      ____________________________________________________________
consensus GAGCTTC
 
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JMSF029P03+ CACACCCTGAGAAGCATCTACAACAAGGAGTGCACCTTCACAGGCTGCAAGGGAGCGAGA
                      ____________________________________________________________
consensus CACACCCTGAGAAGCATCTACAACAAGGAGTGCACCTTCACAGGCTGCAAGGGAGCGAGA
 
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JMSF029P03+ AACNTCATATGAGAAATCTACATGACCTGGAGTGTCAATAAGATTCAGGCAATATGGCTC
                      ____________________________________________________________
consensus AACNTCATATGAGAAATCTACATGACCTGGAGTGTCAATAAGATTCAGGCAATATGGCTC
 
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JMSF029P03+ CCCATNATACATGTAACGCATCCGAGAAGCCTGTAATTTGATAGTGATGCCTCTTTCTCG
                      ____________________________________________________________
consensus CCCATNATACATGTAACGCATCCGAGAAGCCTGTAATTTGATAGTGATGCCTCTTTCTCG
 
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JMSF029P03+ CTCCAAATCCATGTTATCAAGGAACTGTTCCTTCATATCTCGNCTCTCCACTGTCCCTGT
                      ____________________________________________________________
consensus CTCCAAATCCATGTTATCAAGGAACTGTTCCTTCATATCTCGNCTCTCCACTGTCCCTGT
 
. : . : . : . : . : . :
JMSF029P03+ CAGNTGCAGCAACTTATCCGCTAGCGTCGATTTCCCATGATCAATATGCGCTATTATGCA
                      ____________________________________________________________
consensus CAGNTGCAGCAACTTATCCGCTAGCGTCGATTTCCCATGATCAATATGCGCTATTATGCA
 
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JMSF009A20+ ATATAGGAACCTTCGAGAGACGGTCTTTGCCGGCGCGGGCGGC
JMSF029P03+ GAAATTCCTNATATNTGATATAGGAACCTTCGAGAGACGGTCTTANCCGGCGCGGGCGGC
                      ____________________________________________________________
consensus GAAATTCCTNATATNTGATATAGGAACCTTCGAGAGACGGTCTTTGCCGGCGCGGGCGGC
 
. : . : . : . : . : . :
JMSF009A20+ GAGTTCGAGGTCAGTGGCTGTGGCCTGGCAGTGGACGCGGAAGTTACGGCGGCGCGTTGA
JMSF029P03+ GAGTTCGAGGTCAGTGNCTGTGGCCTGGCAGTGGACGCGGAAGTTACGNCGGCGCGTTGA
                      ____________________________________________________________
consensus GAGTTCGAGGTCAGTGGCTGTGGCCTGGCAGTGGACGCGGAAGTTACGGCGGCGCGTTGA
 
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JMSF009A20+ GTGAGCATTGTGTTTCCTCCTGTGGTTTGAGAAGTAGGTGAAGTTGAGGTTGGTGGTGCT
JMSF029P03+ GTGAGCATTGTGTTTCCTCCTGTGGTTTGAGAAGTAGGTGAAGTTGAGGTTGGTGGTGCT
                      ____________________________________________________________
consensus GTGAGCATTGTGTTTCCTCCTGTGGTTTGAGAAGTAGGTGAAGTTGAGGTTGGTGGTGCT
 
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JMSF009A20+ GTGGTGGAGGCGGCGGTGCTGGTGTTGGTGGAGCGGAAGATGATAGGATGAGAGAGTGAA
JMSF029P03+ GTGNTGGAGGCGGCGGTGCTGGTGTTGGTGGAGCGGAAGATGATAGGATGANAGAGTGAA
                      ____________________________________________________________
consensus GTGGTGGAGGCGGCGGTGCTGGTGTTGGTGGAGCGGAAGATGATAGGATGAGAGAGTGAA
 
. : . : . : . : . : . :
JMSF009A20+ TTTGGGGCGGCAAAAATTCGCGGTTGCCATTCGAAAGTGTGTAAAGGAATTGAAGTT
JMSF029P03+ TTTGGGGCGGCAAAAATTCGCGGTTGCCATTCGAAAGTGTGTAAAGGAATTGAAGTTTTC
                      ____________________________________________________________
consensus TTTGGGGCGGCAAAAATTCGCGGTTGCCATTCGAAAGTGTGTAAAGGAATTGAAGTTTTC