| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF026A24 | Sequence | 446 | 009396 (6) | ref|XP_006354963.1| | 6e-42 | PREDICTED: dof zinc finger protein DOF3.4-like [Solanum tuberosum] | 686 | 012317 (2) | |||
| JMFF033B14 | Sequence | 447 | 009396 (6) | ref|XP_006354963.1| | 6e-42 | PREDICTED: dof zinc finger protein DOF3.4-like [Solanum tuberosum] | 701 | 012317 (2) | |||
| JMSF013N19 | Sequence | 464 | 009396 (6) | ref|XP_009758434.1| | 6e-07 | PREDICTED: dof zinc finger protein DOF2.1-like isoform X1 [Nicotiana sylvestris | 694 | 005716 (4) | ref|XP_009598584.1| | 4e-12 | PREDICTED: dof zinc finger protein DOF2.1-like [Nicotiana tomentosiformis] |
| JMSF017M07 | Sequence | 446 | 009396 (6) | 708 | 005716 (4) | ref|XP_009598584.1| | 3e-12 | PREDICTED: dof zinc finger protein DOF2.1-like [Nicotiana tomentosiformis] | |||
| JMSF028P05 | Sequence | 659 | 009396 (6) | ref|XP_009598584.1| | 1e-50 | PREDICTED: dof zinc finger protein DOF2.1-like [Nicotiana tomentosiformis] | 670 | 005716 (4) | ref|XP_009598584.1| | 3e-19 | PREDICTED: dof zinc finger protein DOF2.1-like [Nicotiana tomentosiformis] |
| JMSF029J09 | Sequence | 599 | 009396 (6) | ref|XP_009758434.1| | 2e-42 | PREDICTED: dof zinc finger protein DOF2.1-like isoform X1 [Nicotiana sylvestris | 672 | 005716 (4) | ref|XP_009598584.1| | 1e-08 | PREDICTED: dof zinc finger protein DOF2.1-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF028P05+ ATCCGCTTGTTTCTGCAAGCTCGCGAATGTGAGGCCC
____________________________________________________________
consensus ATCCGCTTGTTTCTGCAAGCTCGCGAATGTGAGGCCC
. : . : . : . : . : . :
JMSF028P05+ AGATCGTGGGGGGATTCGTAGGGGAAGGTTGTGAGGACGAGGCTAGAGGTCAAGGATTGA
____________________________________________________________
consensus AGATCGTGGGGGGATTCGTAGGGGAAGGTTGTGAGGACGAGGCTAGAGGTCAAGGATTGA
. : . : . : . : . : . :
JMSF028P05+ TGGGGATCTTGTTGGCCGGTTGAGATTCTGGGTTTGGAGGAGGAAGATGACGACCTTCTG
____________________________________________________________
consensus TGGGGATCTTGTTGGCCGGTTGAGATTCTGGGTTTGGAGGAGGAAGATGACGACCTTCTG
. : . : . : . : . : . :
JMFF026A24+ GCCGCCGCCGACGGGGACGTTCCGCAGGGTGCCGCCGCGGGTCCAGTAA
JMFF033B14+ GCCGCCGCCGACGGGGACGTTCCGCAGGGTGCCGCCGCGGGTCCAGTAA
JMSF028P05+ TTTTTCCGGCAGCCGCCGCCGACGGGGACGTTGCGGAGGGTGCCGCCTTTGGTCCAGTAT
JMSF029J09+ GCCGCCGCCGACGGGGACGTTGCGGAGGGTGCCGCCTTTGGTCCAGTAT
____________________________________________________________
consensus TTTTTCCGGCAGCCGCCGCCGACGGGGACGTTGCGGAGGGTGCCGCCTTTGGTCCAGTAT
. : . : . : . : . : . :
JMFF026A24+ CGGCGGCAGGATTTGCAAAAGTGGCGAGGCTGAGAGAGGTTGTAGTTGTTGTAGTAACAG
JMFF033B14+ CGGCGGCAGGATTTGCAAAAGTGGCGAGGCTGAGAGAGGTTGTAGTTGTTGTAGTAACAG
JMSF028P05+ CTCCGGCAGGATTTGCAGAAGTAGCGCGGCTGAGAGAGGCTGTAGTTGTTGTAGTAACAG
JMSF029J09+ CTCCGGCAGGATTTGCAGAAGTAGCGCGGCTGAGAGAGGCTGTAGTTGTTGTAGTAACAG
____________________________________________________________
consensus CTGCGGCAGGATTTGCAGAAGTGGCGCGGCTGAGAGAGGTTGTAGTTGTTGTAGTAACAG
. : . : . : . : . : . :
JMFF026A24+ AA
JMFF033B14+ AA
JMSF028P05+ AATTTGGTGTTGGTGGATTCGCATCTAGGGCATTTCTGGGCGTGCTCATCCGCCGGCCGC
JMSF013N19+ GATTCGCATCTAGGGCATTTCTGGGCGTGCTCATCCGCCGGCCGC
JMSF017M07+ TCTGGGCGTGCTCATCCGCCGGCCGC
JMSF029J09+ AATTTGGTGTTGGTGGATTCGCATCTAGGGCATTTCTGGGCGTGCTCATCCGCCGGCCGC
____________________________________________________________
consensus AATTTGGTGTTGGTGGATTCGCATCTAGGGCATTTCTGGGCGTGCTCATCCGCCGGCCGC
. : . : . : . : . : . :
JMSF028P05+ GGCTTCTTCTCTTGCTGCTGTGCCTTTGCCGACGCCTCCACCATGCTTTCTAGCGTCTGT
JMSF013N19+ GGCTTCTTCTCTTGCTGCTGTGCCTTTGCCGACGCCTCCACCATGCTTTCTAGCGTCTGT
JMSF017M07+ GGCTTCTTCTCTTGCTGCTGTGCCTTTGCCGACGCCTCCACCATGCTTTCTAGCGTCTGT
JMSF029J09+ GGCTTCTTCTCTTGCTGCTGTGCCTTTGCCGACGCCTCCACCATGCTTTCTAGCGTCTGT
____________________________________________________________
consensus GGCTTCTTCTCTTGCTGCTGTGCCTTTGCCGACGCCTCCACCATGCTTTCTAGCGTCTGT
. : . : . : . : . : . :
JMSF028P05+ GATGACATTTCCTGTGCACAAGAAGGATCCATCCATGCACCAATTACGGCAGCAGCTATG
JMSF013N19+ GATGACATTTCCTGTGCACAAGAAGGATCCATCCATGCACCAATTACGGCAGCAGCTATG
JMSF017M07+ GATGACATTTCCTGTGCACAAGAAGGATCCATCCATGCACCAATTACGGCAGCAGCTATG
JMSF029J09+ GATGACATTTCCTGTGCACAAGAAGGATCCATCCATGCACCAATTACGGCAGCAGCTATG
____________________________________________________________
consensus GATGACATTTCCTGTGCACAAGAAGGATCCATCCATGCACCAATTACGGCAGCAGCTATG
. : . : . : . : . : . :
JMSF028P05+ AGCAATATATTCAAATTCCTTCTGAGATTTGAAATTGGGAGATCAGAGCAGCACTGATGA
JMSF013N19+ AGCAATATATTCAAATTCCTTCTGAGATTTGAAATTGGGAGATCAGAGCAGCACTGATGA
JMSF017M07+ AGCAATATATTCAAATTCCTTCTGAGATTTGAAATTGGGAGATCAGAGCAGCACTGATGA
JMSF029J09+ AGCAATATATTCAAATTCCTTCTGAGATTTGAAATTGGGAGATCAGAGCAGCACTGATGA
____________________________________________________________
consensus AGCAATATATTCAAATTCCTTCTGAGATTTGAAATTGGGAGATCAGAGCAGCACTGATGA
. : . : . : . : . : . :
JMSF028P05+ TATATATATCTCCAGACAGAACCAAATTAAAGGCTTTTGTATGGTAGCTAGAGACTGGAA
JMSF013N19+ TATATATATCTCCAGACAGAACCAAATTAAAGGCTTTTGTATGGTAGCTAGAGACTGGAA
JMSF017M07+ TATATATATCTCCAGACAGAACCAAATTAAAGGCTTTTGTATGGTAGCTAGAGACTGGAA
JMSF029J09+ TATATATATCTCCAGACAGAACCAAATTAAAGGCTTTTGTATGGTAGCTAGAGACTGGAA
____________________________________________________________
consensus TATATATATCTCCAGACAGAACCAAATTAAAGGCTTTTGTATGGTAGCTAGAGACTGGAA
. : . : . : . : . : . :
JMSF028P05+ ACACTGTATGTATATATAGAGAGAGAGAGAGTGAGGGGTAGCGGCCGACAGTGTGAAACA
JMSF013N19+ ACACTGTATGTATATATAGAGAGAGAGAGAGTGAGGGGTAGCGGCCGACAGTGTGAAACA
JMSF017M07+ ACACTGTATGTATATATAGAGAGAGAGAGAGTGAGGGGTAGCGGCCGACAGTGTGAAACA
JMSF029J09+ ACACTGTATGTATATATAGAGAGAGAGAGAGTGAGGGGTAGCGGCCGACAGTGTGAAACA
____________________________________________________________
consensus ACACTGTATGTATATATAGAGAGAGAGAGAGTGAGGGGTAGCGGCCGACAGTGTGAAACA
. : . : . : . : . : . :
JMSF028P05+ AAGGGGTACTGAATTCAAT
JMSF013N19+ AAGGGGTACTGAATTCAATTCAAAACAAACCAAATGTCAAAGAAGATATATATATAATAC
JMSF017M07+ AAGGGGTACTGAATTCAATTCAAAACAAACCAAATGTCAAAGAAGATATATATATAATAC
JMSF029J09+ AAGGGGTACTGAATTCAATTCAAAACAAACCAAATGTCAAAGAAGATATATATATAATAC
____________________________________________________________
consensus AAGGGGTACTGAATTCAATTCAAAACAAACCAAATGTCAAAGAAGATATATATATAATAC
. : . : . : . : . : . :
JMSF013N19+ ATGCAGATAAGATACTAAGGTGAAGGGAAGAAGCAAACTCAAGTTAAAGGCAACTTCTC
JMSF017M07+ ATGCAGATAAGATACTAAGGTGAAGGGAAGAAGCAAACTCAAGTTAAAGGCAACTTCTC
JMSF029J09+ ATGCAGATAAGATACTAAGGTGAAGGGAAGAAGCAAACTCAAGTTAAAGGCAACTTCTCC
____________________________________________________________
consensus ATGCAGATAAGATACTAAGGTGAAGGGAAGAAGCAAACTCAAGTTAAAGGCAACTTCTCC