| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF038C22 | Sequence | 430 | 009395 (6) | ref|XP_006367361.1| | 3e-46 | PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic-like [Sol | |||||
| JMFN016D24 | Sequence | 609 | 009395 (6) | ref|XP_006367361.1| | 2e-63 | PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic-like [Sol | |||||
| JMSF029I22 | Sequence | 640 | 009395 (6) | ref|XP_006367361.1| | 6e-56 | PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic-like [Sol | 681 | 009395 (6) | ref|XP_006367361.1| | 2e-104 | PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic-like [Sol |
| JMSF032G22 | Sequence | 633 | 009395 (6) | ref|XP_006367361.1| | 3e-55 | PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic-like [Sol | 751 | 009395 (6) | ref|XP_006367361.1| | 4e-104 | PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic-like [Sol |
This contig is upended
. : . : . : . : . : . :
rJMSF029I22- GGTAGCAAGATGGAATA
____________________________________________________________
consensus GGTAGCAAGATGGAATA
. : . : . : . : . : . :
rJMSF029I22- TTCGGGGAAAAAGCCAAAGTGTTTCTTGTTGATCTATGTCTAATGAAAAATCATCTCTAT
rJMSF032G22- AATCATCTCTAT
____________________________________________________________
consensus TTCGGGGAAAAAGCCAAAGTGTTTCTTGTTGATCTATGTCTAATGAAAAATCATCTCTAT
. : . : . : . : . : . :
rJMSF029I22- ACAAGGAACACATTTGTGCTAGCATGATCTTACATAGGTTAACAGACCGACCGAGCTTTC
rJMSF032G22- ACAAGGAACACATTTGTGCTAGCATGATCTTACATAGGTTAACAGACCGACCGAGCTTTC
____________________________________________________________
consensus ACAAGGAACACATTTGTGCTAGCATGATCTTACATAGGTTAACAGACCGACCGAGCTTTC
. : . : . : . : . : . :
rJMSF029I22- ATTCTTCAGAAACTGTAGGTAATCCTTCCTTATACCAGGTATAGAGCCCTCCTTCCAAGT
rJMSF032G22- ATTCTTCAGAAACTGTAGGTAATCCTTCCTTATACCAGGTATAGAGCCCTCCTTCCAAGT
____________________________________________________________
consensus ATTCTTCAGAAACTGTAGGTAATCCTTCCTTATACCAGGTATAGAGCCCTCCTTCCAAGT
. : . : . : . : . : . :
rJMSF029I22- GGTAAACATTGGTATAACCATTGAGAACTAGCACATAGGCTGCAATGAGTGACCTTGACT
rJMSF032G22- GGTAAACATTGGTATAACCATTGAGAACTAGCACATAGGCTGCAATGAGTGACCTTGACT
____________________________________________________________
consensus GGTAAACATTGGTATAACCATTGAGAACTAGCACATAGGCTGCAATGAGTGACCTTGACT
. : . : . : . : . : . :
rJMSF029I22- GCTGGCCTTCTGGAAGATTTTGTGTTGGCTTCATTGTACCTCCAGATGAGCAAGCTACTA
rJMSF032G22- GCTGGCCTTCTGGAAGATTTTGTGTTGGCTTCATTGTACCTCCAGATGAGCAAGCTACTA
____________________________________________________________
consensus GCTGGCCTTCTGGAAGATTTTGTGTTGGCTTCATTGTACCTCCAGATGAGCAAGCTACTA
. : . : . : . : . : . :
rJMSF029I22- TGATTTTGGCGGTCTTATCTATTTTAGATTCCACAGTTTGAATAAACTCTGGATTTTCTT
JMFF038C22+ CTTATCTATTTTAGATTCCACAGTTTGAATAAACTCTGGATTTTCTT
rJMSF032G22- TGATTTTGGCGGTCTTATCTATTTTAGATTCCACAGTTTGAATAAACTCTGGATTTTCTT
JMFN016D24+ TTTGAATAAACTCTGGATTTTCTT
JMSF032G22+ TTAGATTCCACAGTTTGAATAAACTCTGGATTTTCTT
JMSF029I22+ ATTTTAGATTCCACAGTTTGAATAAACTCTGGATTTTCTT
____________________________________________________________
consensus TGATTTTGGCGGTCTTATCTATTTTAGATTCCACAGTTTGAATAAACTCTGGATTTTCTT
. : . : . : . : . : . :
rJMSF029I22- CTGTTCCTTGGAATATGCCAAAGAAGGCAAATGCTGCTCGTCTAGCAATGTCCCAAGCTG
JMFF038C22+ CTGTTCCTTGGAATATGCCAAAGAAGGCAAATGCTGCTCGTCTAGCAATGTCCCAAGCTG
rJMSF032G22- CTGTTCCTTGGAATATGCCAAAGAAGGCAAATGCTGCTCGTCTAGCAATGTCCCAAGCTG
JMFN016D24+ CTGTTCCTTGGAATATGCCAAAGAAGGCAAATGCTGCTCGTCTAGCAATGTCCCAAGCTG
JMSF032G22+ CTGTTCCTTGGAATATGCCAAAGAAGGCAAATGCTGCTCGTCTAGCAATGTCCCAAGCTG
JMSF029I22+ CTGTTCCTTGGAATATGCCAAAGAAGGCAAATGCTGCTCGTCTAGCAATGTCCCAAGCTG
____________________________________________________________
consensus CTGTTCCTTGGAATATGCCAAAGAAGGCAAATGCTGCTCGTCTAGCAATGTCCCAAGCTG
. : . : . : . : . : . :
rJMSF029I22- TCCACTCCTTGATTAGCCTATATATTTGCACATTCACAGCTCCTGGTGGGTGAGCCTCCT
JMFF038C22+ TCCACTCCTTGATTAGCCTATATATTTGCACATTCACAGCTCCTGGTGGGTGAGCCTCCT
rJMSF032G22- TCCACTCCTTGATTAGCCTATATATTTGCACATTCACAGCTCCTGGTGGGTGAGCCTCCT
JMFN016D24+ TCCACTCCTTGATTAGCCTATATATTTGCACATTCACAGCTCCTGGTGGGTGAGCCTCCT
JMSF032G22+ TCCACTCCTTGATTAGCCTATATATTTGCACATTCACAGCTCCTGGTGGGTGAGCCTCCT
JMSF029I22+ TCCACTCCTTGATTAGCCTATATATTTGCACATTCACAGCTCCTGGTGGGTGAGCCTCCT
____________________________________________________________
consensus TCCACTCCTTGATTAGCCTATATATTTGCACATTCACAGCTCCTGGTGGGTGAGCCTCCT
. : . : . : . : . : . :
rJMSF029I22- TGAACTCTGCTTCTGGGCGTACGTCAAGAATCACAAAATTGTTTTCTTTCTGAAGTCTGA
JMFF038C22+ TGAACTCTGCTTCTGGGCGTACGTCAAGAATCACAAAATTGTTTTCTTTCTGAAGTCTGA
rJMSF032G22- TGAACTCTGCTTCTGGGCGTACGTCAAGAATCACAAAATTGTTTTCTTTCTGAAGTCTGA
JMFN016D24+ TGAACTCTGCTTCTGGGCGTACGTCAAGAATCACAAAATTGTTTTCTTTCTGAAGTCTGA
JMSF032G22+ TGAACTCTGCTTCTGGGCGTACGTCAAGAATCACAAAATTGTTTTCTTTCTGAAGTCTGA
JMSF029I22+ TGAACTCTGCTTCTGGGCGTACGTCAAGAATCACAAAATTGTTTTCTTTCTGAAGTCTGA
____________________________________________________________
consensus TGAACTCTGCTTCTGGGCGTACGTCAAGAATCACAAAATTGTTTTCTTTCTGAAGTCTGA
. : . : . : . : . : . :
rJMSF029I22- ATGCTTCCTTTGCATCTACACTCCTTACCCTTTTCTCAAGAAGCTTTGCTCTCTTAGTTG
JMFF038C22+ ATGCTTCCTTTGCATCTACACTCCTTACCCTTTTCTCAAGAAGCTTTGCTCTCTTAGTTG
rJMSF032G22- ATGCTTCCTTTGCATCTACACTCCTTACCCTTTTCTCAAGAAGCTTTGCTCTCTTAGTTG
JMFN016D24+ ATGCTTCCTTTGCATCTACACTCCTTACCCTTTTCTCAAGAAGCTTTGCTCTCTTAGTTG
JMSF032G22+ ATGCTTCCTTTGCATCTACACTCCTTACCCTTTTCTCAAGAAGCTTTGCTCTCTTAGTTG
JMSF029I22+ ATGCTTCCTTTGCATCTACACTCCTTACCCTTTTCTCAAGAAGCTTTGCTCTCTTAGTTG
____________________________________________________________
consensus ATGCTTCCTTTGCATCTACACTCCTTACCCTTTTCTCAAGAAGCTTTGCTCTCTTAGTTG
. : . : . : . : . : . :
rJMSF029I22- ACCAGTCTTCTTCAGCTGGTGTTTTGGCAGGTTTGGTTGCTGCGCATCTAATGTTGACAG
JMFF038C22+ ACCAGTCTTCTTCAGCTGGTGTTTTGGCAGGTTTGGTTGCTGCGCATNTAATGTTGACAG
rJMSF032G22- ACCAGTCTTCTTCAGCTGGTGTTTTGGCAGGTTTGGTTGCTGCGCATCTAATGTTGACAG
JMFN016D24+ ACCAGTCTTCTTCAGCTGGTGTTTTGGCAGGTTTGGTTGCTGCGCATCTAATGTTGACAG
JMSF032G22+ ACCAGTCTTCTTCAGCTGGTGTTTTGGCAGGTTTGGTTGCTGCGCATCTAATGTTGACAG
JMSF029I22+ ACCAGTCTTCTTCAGCTGGTGTTTTGGCAGGTTTGGTTGCTGCGCATCTAATGTTGACAG
____________________________________________________________
consensus ACCAGTCTTCTTCAGCTGGTGTTTTGGCAGGTTTGGTTGCTGCGCATCTAATGTTGACAG
. : . : . : . : . : . :
rJMSF029I22- TAGC
JMFF038C22+ TAGCAGGCCTGGAGCTGAAAGACAGGCTCCTGCTCCTGCTCTTGCTCTNNGAGGATGTNG
rJMSF032G22- TAGCAGGCCTGGAGCTGAAAGACAGGCTCCTGCTCCTGCTCTTGCTCTTTGAGGATGTCG
JMFN016D24+ TAGCAGGCCTGGAGCTGAAAGACAGGCTCCTGCTCCTGCTCTTGCTCTTTGAGGATGTCG
JMSF032G22+ TAGCAGGCCTGGAGCTGAAAGACAGGCTCCTGCTCCTGCTCTTGCTCTTTGAGGATGTCG
JMSF029I22+ TAGCAGGCCTGGAGCTGAAAGACAGGCTCCTGCTCCTGCTCTTGCTCTTTGAGGATGTCG
____________________________________________________________
consensus TAGCAGGCCTGGAGCTGAAAGACAGGCTCCTGCTCCTGCTCTTGCTCTTTGAGGATGTCG
. : . : . : . : . : . :
JMFF038C22+ CGGTTCTGGTAACCTNTGATTCC
rJMSF032G22- CGGTTCTGGTAACCTTTGATTCCTTTACCACAATTGAAGTGTAGCTATGTGATATACTAC
JMFN016D24+ CGGTTCTGGTAACCTTTGATTCCTTTACCACAATTGAAGTGTAGCTATGTGATATACTAC
JMSF032G22+ CGGTTCTGGTAACCTTTGATTCCTTTACCACAATTGAAGTGTAGCTATGTGATATACTAC
JMSF029I22+ CGGTTCTGGTAACCTTTGATTCCTTTACCACAATTGAAGTGTAGCTATGTGATATACTAC
____________________________________________________________
consensus CGGTTCTGGTAACCTTTGATTCCTTTACCACAATTGAAGTGTAGCTATGTGATATACTAC
. : . : . : . : . : . :
rJMSF032G22- GCTGAAAATTATGGTGCA
JMFN016D24+ GCTGAAAATTATGGTGCAGAGCTGAAGAAGATGATGAGCCGGGCGTAAGGGCAGCCATAT
JMSF032G22+ GCTGAAAATTATGGTGCAGAGCTGAAGAAGATGATGAGCCGGGCGTAAGGGCAGCCATAT
JMSF029I22+ GCTGAAAATTATGGTGCAGAGCTGAAGAAGATGATGAGCCGGGCGTAAGGGCAGCCATAT
____________________________________________________________
consensus GCTGAAAATTATGGTGCAGAGCTGAAGAAGATGATGAGCCGGGCGTAAGGGCAGCCATAT
. : . : . : . : . : . :
JMFN016D24+ GGAAGCAATTTCAGAAAAAAAGGATAACAGAGGTATGGGTTTTTGATCTTT
JMSF032G22+ GGAAGCAATTTCAGAAAAAAAGGATAACAGAGGTATGGGTTTTTGATCTTTTTTAGTAGT
JMSF029I22+ GGAAGCAATTTCAGAAAAAAAGGATAACAGAGGTATGGGTTTTTGATCTTTTTTAGTAGT
____________________________________________________________
consensus GGAAGCAATTTCAGAAAAAAAGGATAACAGAGGTATGGGTTTTTGATCTTTTTTAGTAGT
. : . : . : . : . : . :
JMSF032G22+ AGTGTAATCTTAAATGTGTTATGAAGGCCTATGTGTAGCTACTTAATTTGGGTTT
JMSF029I22+ AGTGTAATCTTAAATGTGTTATGAAGGCCTATGTGTAGCTACTTAATTTGGGTTTGCCTT
____________________________________________________________
consensus AGTGTAATCTTAAATGTGTTATGAAGGCCTATGTGTAGCTACTTAATTTGGGTTTGCCTT