Contig 009394:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016H03Sequence243009394 (2)ref|XP_009800158.1|2e-19PREDICTED: uncharacterized protein LOC104246111 isoform X1 [Nicotiana sylvestri767011343 (2)ref|XP_002523791.1|1e-98catalytic, putative [Ricinus communis] gb|EEF38517.1| catalytic, putative [Ricin
JMSF029G12Sequence672009394 (2)ref|XP_009800158.1|2e-47PREDICTED: uncharacterized protein LOC104246111 isoform X1 [Nicotiana sylvestri811011343 (2)ref|XP_002523791.1|6e-99catalytic, putative [Ricinus communis] gb|EEF38517.1| catalytic, putative [Ricin

Alignment

This contig is upended


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JMSF029G12+                                                           TCCTGCCCGATC
                      ____________________________________________________________
consensus                                                             TCCTGCCCGATC
 
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JMSF029G12+           ATATGACAAGAGATATATTTGGAGCTCTTCAATGAGGTCTTGAGAGAGAGGCAACTCCAA
                      ____________________________________________________________
consensus             ATATGACAAGAGATATATTTGGAGCTCTTCAATGAGGTCTTGAGAGAGAGGCAACTCCAA
 
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JMSF029G12+           ATCTTTAGAGTTATCAAAGCCATGGACAATGATGATCTTGTATCTGGCCGTTTCTTTGGG
                      ____________________________________________________________
consensus             ATCTTTAGAGTTATCAAAGCCATGGACAATGATGATCTTGTATCTGGCCGTTTCTTTGGG
 
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JMSF016H03+                          GTAAGCCAGATGTCTCCCATCACTGAGTTTGACCCTTGGCGAAAT
JMSF029G12+           CACGCCTCTCTCTCTGTAAGCCAGATGTCTCCCATCACTGAGTTTGACCCTTGGCGAAAT
                      ____________________________________________________________
consensus             CACGCCTCTCTCTCTGTAAGCCAGATGTCTCCCATCACTGAGTTTGACCCTTGGCGAAAT
 
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JMSF016H03+           CACAGGAGGACCACCTGGTGAGCCACAAACTTTTGGAGAGGGGGGCTTTATTAGTGCCAG
JMSF029G12+           CACAGGAGGACCACCTGGTGAGCCACAAACTTTTGGAGAGGGGGGCTTTATTAGTGCCAG
                      ____________________________________________________________
consensus             CACAGGAGGACCACCTGGTGAGCCACAAACTTTTGGAGAGGGGGGCTTTATTAGTGCCAG
 
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JMSF016H03+           ATAAGCCCAACCCAGAGCACCAACTGTTGCTGCAATTGCATATTTATACATAAC      
JMSF029G12+           ATAAGCCCAACCCAGAGCACCAACTGTTGCTGCAATTGCATATTTATACATAACAATAGA
                      ____________________________________________________________
consensus             ATAAGCCCAACCCAGAGCACCAACTGTTGCTGCAATTGCATATTTATACATAACAATAGA
 
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JMSF029G12+           TTGGAACACAAGCCTATTTTCTAAGCCTTGCCCACTTAAAATTGCTTTGAACACACTATG
                      ____________________________________________________________
consensus             TTGGAACACAAGCCTATTTTCTAAGCCTTGCCCACTTAAAATTGCTTTGAACACACTATG
 
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JMSF029G12+           CAATTGATGAGGTTTCCACCTCCAAATTCATTAACTCATTTCTCAACATCAACACTCCCA
                      ____________________________________________________________
consensus             CAATTGATGAGGTTTCCACCTCCAAATTCATTAACTCATTTCTCAACATCAACACTCCCA
 
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JMSF029G12+           TGCCCGCACGGGTAACTCAATTGGAGATTGTGAGCAAAGACACTCGATCTATCCGGACAA
                      ____________________________________________________________
consensus             TGCCCGCACGGGTAACTCAATTGGAGATTGTGAGCAAAGACACTCGATCTATCCGGACAA
 
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JMSF029G12+           TATGGTGGACTTCTTGTAGGCACCAGGTCCTCCAAGCCCTCTGAGTGAAGTAGAAAGGAG
                      ____________________________________________________________
consensus             TATGGTGGACTTCTTGTAGGCACCAGGTCCTCCAAGCCCTCTGAGTGAAGTAGAAAGGAG
 
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JMSF029G12+           GGTGCTTGACTGGGGTTTGACTACGTGAGCTGTGCTGCTCTGCAACTCTGCTGCTAGCAG
                      ____________________________________________________________
consensus             GGTGCTTGACTGGGGTTTGACTACGTGAGCTGTGCTGCTCTGCAACTCTGCTGCTAGCAG
 
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JMSF029G12+           TTTCAGCGCCCAAGCAGAAGAAGGCACACTGAAGAGCAGCCTTCAATCACCATCACGTTC
                      ____________________________________________________________
consensus             TTTCAGCGCCCAAGCAGAAGAAGGCACACTGAAGAGCAGCCTTCAATCACCATCACGTTC