Contig 009388:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF028L09+                                                     GAACAATACACACAAAA
JMSF028L09-                                                      GAACAATACACACAAAA
                      ____________________________________________________________
consensus                                                        GAACAATACACACAAAA
 
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rJMSF028L09+          ATTTCAATCCCACAACTTCACATTATTTCATCCGAAATCAAGGTATAGAGAGCAAACACA
JMSF028L09-           ATTTCAATCCCACAACTTCACATTATTTCATCCGAAATCAAGGTATAGAGAGCAAACACA
                      ____________________________________________________________
consensus             ATTTCAATCCCACAACTTCACATTATTTCATCCGAAATCAAGGTATAGAGAGCAAACACA
 
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rJMSF028L09+          TGGCCGCTTGCAAAGTTGGTTTCTTCACCGTCCTCCTTGTGTGTGGTATTTTTTTATTGG
JMSF028L09-           TGGCCGCTTGCAAAGTTGGTTTCTTCACCGTCCTCCTTGTGTGTGGTATTTTTTTATTGG
                      ____________________________________________________________
consensus             TGGCCGCTTGCAAAGTTGGTTTCTTCACCGTCCTCCTTGTGTGTGGTATTTTTTTATTGG
 
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rJMSF028L09+          GAAGCAATGTGGAGCTTGGAAATGCTCAATTTTGCCCCCTGTTCTGTGATCGTAGAGTAG
JMSF028L09-           GAAGCAATGTGGAGCTTGGAAATGCTCAATTTTGCCCCCTGTTCTGTGATCGTAGAGTAG
                      ____________________________________________________________
consensus             GAAGCAATGTGGAGCTTGGAAATGCTCAATTTTGCCCCCTGTTCTGTGATCGTAGAGTAG
 
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rJMSF028L09+          CCTATATGATCTGCCCACCTAATAACGTAAGGACTCAGCCAGTTTGTAGAAATTGTTGTC
JMSF028L09-           CCTATATGATCTGCCCACCTAATAACGTAAGGACTCAGCCAGTTTGTAGAAATTGTTGTC
                      ____________________________________________________________
consensus             CCTATATGATCTGCCCACCTAATAACGTAAGGACTCAGCCAGTTTGTAGAAATTGTTGTC
 
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rJMSF028L09+          AAGTTGCAAACAACGGTTGTCATCTCTTCGATTCCAATGATTCACGCATTTGCTAGGTCT
JMSF028L09-           AAGTTGCAAACAACGGTTGTCATCTCTTCGATTCCAATGATTCACGCATTTGCTAGGTCT
                      ____________________________________________________________
consensus             AAGTTGCAAACAACGGTTGTCATCTCTTCGATTCCAATGATTCACGCATTTGCTAGGTCT
 
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rJMSF028L09+          TTTGTGAGGTCGTATAACCCCAAATGTTTAAATCAAGTAATCTCAACGATAATAATAATA
JMSF028L09-           TTTGTGAGGTCGTATAACCCCAAATGTTTAAATCAAGTAATCTCAACGATAATAATAATA
                      ____________________________________________________________
consensus             TTTGTGAGGTCGTATAACCCCAAATGTTTAAATCAAGTAATCTCAACGATAATAATAATA
 
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rJMSF028L09+          ATAATGTCTCAATCATCAATGCAGATGGAATAAGATTGTAAGACTCTTCGGAATAACTAT
JMSF028L09-           ATAATGTCTCAATCATCAATGCAGATGGAATAAGATTGTAAGACTCTTCGGAATAACTAT
                      ____________________________________________________________
consensus             ATAATGTCTCAATCATCAATGCAGATGGAATAAGATTGTAAGACTCTTCGGAATAACTAT
 
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rJMSF028L09+          GCATGGGGGATGAGACTACTAGTATAGTCTATTACCTTCATTGTAATCAAACCTCACCAT
JMSF028L09-           GCATGGGGGATGAGACTACTAGTATAGTCTATTACCTTCATTGTAATCAAACCTCACCAT
                      ____________________________________________________________
consensus             GCATGGGGGATGAGACTACTAGTATAGTCTATTACCTTCATTGTAATCAAACCTCACCAT
 
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rJMSF028L09+          TGTAGTGTGGTTTTGTTGTTGTTAAATGTGAACTGTTTGGGTTGTTATTACTTCTATTTG
JMSF028L09-           TGTAGTGTGGTTTTGTTGTTGTTAAATGTGAACTGTTTGGGTTGTTATTACTTCTATTTG
                      ____________________________________________________________
consensus             TGTAGTGTGGTTTTGTTGTTGTTAAATGTGAACTGTTTGGGTTGTTATTACTTCTATTTG
 
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rJMSF028L09+          ATTATATTGCGAGGAGGAA                                         
JMSF028L09-           ATTATATTGCGAGGAGGAATGTGCTAATGCATGCTAAGCTTTAACTTGGCAAAAAAAAAA
                      ____________________________________________________________
consensus             ATTATATTGCGAGGAGGAATGTGCTAATGCATGCTAAGCTTTAACTTGGCAAAAAAAAAA