| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS009A02 | Sequence | 611 | 009384 (9) | ref|XP_009796981.1| | 293 | PREDICTED: rho GTPase-activating protein 7-like [Nicotiana sylvestris] | |||||
| JMFS041A02 | Sequence | 629 | 009384 (9) | ref|XP_009796981.1| | 251 | PREDICTED: rho GTPase-activating protein 7-like [Nicotiana sylvestris] | |||||
| JMFS093B10 | Sequence | 618 | 009384 (9) | ref|XP_009796981.1| | 239 | PREDICTED: rho GTPase-activating protein 7-like [Nicotiana sylvestris] | |||||
| JMFS141B10 | Sequence | 626 | 009384 (9) | ref|XP_009796981.1| | 304 | PREDICTED: rho GTPase-activating protein 7-like [Nicotiana sylvestris] | |||||
| JMFS148F03 | Sequence | 661 | 009384 (9) | ref|XP_009796981.1| | 303 | PREDICTED: rho GTPase-activating protein 7-like [Nicotiana sylvestris] | |||||
| JMFS159B08 | Sequence | 446 | 009384 (9) | ref|XP_009796981.1| | 192 | PREDICTED: rho GTPase-activating protein 7-like [Nicotiana sylvestris] | |||||
| JMFS166D02 | Sequence | 560 | 009384 (9) | ref|XP_009796981.1| | 214 | PREDICTED: rho GTPase-activating protein 7-like [Nicotiana sylvestris] | |||||
| JMSF009H24 | Sequence | 275 | 009384 (9) | ref|XP_009624925.1| | 3e-11 | PREDICTED: rho GTPase-activating protein 7-like isoform X3 [Nicotiana tomentosi | 789 | 011259 (2) | ref|XP_009804165.1| | 2e-90 | PREDICTED: rho GTPase-activating protein 7-like isoform X1 [Nicotiana sylvestri |
| JMSF028H02 | Sequence | 635 | 009384 (9) | ref|XP_009796981.1| | 252 | PREDICTED: rho GTPase-activating protein 7-like [Nicotiana sylvestris] | 722 | 011259 (2) | ref|XP_009804166.1| | 4e-80 | PREDICTED: rho GTPase-activating protein 7-like isoform X2 [Nicotiana sylvestri |
This contig is upended
. : . : . : . : . : . :
JMFS148F03+ AAGGATGGACCACCATCTATATCTTCTAAGGCAAGCAAGA
____________________________________________________________
consensus AAGGATGGACCACCATCTATATCTTCTAAGGCAAGCAAGA
. : . : . : . : . : . :
JMFS148F03+ TTGGCCGTCCAACAACCAAAGACTTCACGGGACGTTTATCCCTCCATTGATGGAAAGAAC
JMFS141B10+ GCCGTCCAACAACCAAAGACTTCACGGGACGTTTATCCCTCCATTGATGGAAAGAAC
JMFS009A02+ CTTCACGGGACGTTTATCCCTCCATTGATGGAAAGAAC
____________________________________________________________
consensus TTGGCCGTCCAACAACCAAAGACTTCACGGGACGTTTATCCCTCCATTGATGGAAAGAAC
. : . : . : . : . : . :
JMFS148F03+ CTTCACTTGAATCACCGTTGTCATTCCGAAATATGCCATTCTGTCCCATCACAAGGGCAG
JMFS141B10+ CTTCACTTGAATCACCGTTGTCATTCCGAAATATGCCATTCTGTCCCATCACAAGGGCAG
JMFS009A02+ CTTCACTTGAATCACCGTTGTCATTCCGAAATATGCCATTCTGTCCCATCACAAGGGCAG
JMFS166D02+ CAG
JMFS041A02+ CGTTGTCATTCCGAAATATGCCATTCTGTCCCATCACAAGGGCAG
JMFS093B10+ TCTGTCCCATCACAAGGGCAG
JMSF028H02+ CCGAAATATGCCATTCTGTCCCATCACAAGGGCAG
____________________________________________________________
consensus CTTCACTTGAATCACCGTTGTCATTCCGAAATATGCCATTCTGTCCCATCACAAGGGCAG
. : . : . : . : . : . :
JMFS148F03+ CATTTGGTGCTTGTGCAAGAGCATGTTCAAGAGCAGTCTTCCACTCATACAAATCCTCTG
JMFS141B10+ CATTTGGTGCTTGTGCAAGAGCATGTTCAAGAGCAGTCTTCCACTCATACAAATCCTCTG
JMFS009A02+ CATTTGGTGCTTGTGCAAGAGCATGTTCAAGAGCAGTCTTCCACTCATACAAATCCTCTG
JMFS166D02+ CATTTGGTGCTTGTGCAAGAGCATG-TCAAGAGCAGTCTTCCACTCATACAAATCCTCTG
JMFS041A02+ CATTTGGTGGTTGTGCAAGAGCATGTTCAAGAGCAGTCTTCCACTCATACAAATCCTCTG
JMFS093B10+ CATTTGGTGCTTGTGCAAGAGCATGTTCAAGAGCAGTCTTCCACTCATACANATCCTCTG
JMFS159B08+ G
JMSF028H02+ CATTTGGTGCTTGTGCAAGAGCATGTTCAAGAGCAGTCTTCCACTCATACAAATCCTCTG
____________________________________________________________
consensus CATTTGGTGCTTGTGCAAGAGCATGTTCAAGAGCAGTCTTCCACTCATACAAATCCTCTG
. : . : . : . : . : . :
JMFS148F03+ ATGTTTCAGCCTTAAGAGTAAATGCCCGACCATCACGTCCATCAGGAAAAAGTACAGTTA
JMFS141B10+ ATGTTTCAGCCTTAAGAGTAAATGCCCGACCATCACGTCCATCAGGAAAAAGTACAGTTA
JMFS009A02+ ATGTTTCAGCCTTAAGAGTAAATGCCCGACCATCACGTCCATCAGGAAAAAGTACAGTTA
JMFS166D02+ ATGTTTCAGCCTTAAGAGTAAATGCCCGACCATCACGTCCATCAGGAAAAAGTACAGTTA
JMFS041A02+ ATGTTTCAGCCTTAAGAGTAAATGCCCGACCATCACGTCCATCAGGAAAAAGTACAGTTA
JMFS093B10+ ATGTTNCAGCCTTAAGAGTAAATGCCCGACCATCACGTCCATCAGGAAAAAGTACAGTTA
JMFS159B08+ ATGTTTCAGCCTTAAGAGTAAATGCCCGACCATCACGTCCATCAGGAAAAAGTACAGTTA
JMSF028H02+ ATGTTTCAGCCTTAAGAGTAAATGCCCGACCATCACGTCCATCAGGAAAAAGTACAGTTA
____________________________________________________________
consensus ATGTTTCAGCCTTAAGAGTAAATGCCCGACCATCACGTCCATCAGGAAAAAGTACAGTTA
. : . : . : . : . : . :
JMFS148F03+ ACAGTTTTTTATCTTCTCTAACAACCACACTTCCAGAATTATTTAAGTCTATGCCTCCCA
JMFS141B10+ ACAGTTTTTTATCTTCTCTAACAACCACACTTCCAGAATTATTTAAGTCTATGCCTCCCA
JMFS009A02+ ACAGTTTTTTATCTTCTCTAACAACCACACTTCCAGAATTATTTAAGTCTATGCCTCCCA
JMFS166D02+ ACAGTTTTTTATCTTCTCTAACAACCACACTTCCAGAATTATTTAAGTCTATGCCTCCCA
JMFS041A02+ ACAGTTTTTTATCTTCTCTAACAACCACACTTCCAGAATTGTTTAAGTCTATGCCTCCCA
JMFS093B10+ ACAGTTTTTTATCTTCTCTAACAACCACACTTCCAGAATTATTTAAGTCTATGCCTCCCA
JMFS159B08+ ACAGTTTTTTATCTTCTCTAACAACCACACTTCCAGAATTATTTAAGTCTATGCCTCCCA
JMSF028H02+ ACAGTTTTTTATCTTCTCTAACAACCACACTTCCAGAATTATTTAAGTCTATGCCTCCCA
____________________________________________________________
consensus ACAGTTTTTTATCTTCTCTAACAACCACACTTCCAGAATTATTTAAGTCTATGCCTCCCA
. : . : . : . : . : . :
JMFS148F03+ AAGTCAGATTAACTTCACCACCTCGTTGTGGAAGAGTACTAGGATCATTCTTGAGGAAAA
JMFS141B10+ AAGTCAGATTAACTTCACCACCTCGTTGTGGAAGAGTACTAGGATCATTCTTGAGGAAAA
JMFS009A02+ AAGTCAGATTAACTTCACCACCTCGTTGTGGAAGAGTACTAGGATCATTCTTGAGGAAAA
JMFS166D02+ AAGTCAGATTAACTTCACCACCTCGTTGTGGAAGAGTACTAGGATCATTCTTGAGGAAAA
JMFS041A02+ AAGTCAGATTAACTTCACCACCTCGTTGTGGAAGAGTACTAGGATCATTCTTGAGGAAAA
JMFS093B10+ AAGTCAGATTAACTTCACCACCTCGTTGTGGAAGAGTACTAGGATCATTCTTGAGGAAAA
JMFS159B08+ AAGTCAGATTAACTTCACCACCTCGTTGTGGAAGAGTACTAGGATCATTCTTGAGGAAAA
JMSF028H02+ AAGTCAGATTAACTTCACCACCTCGTTGTGGAAGAGTACTAGGATCATTCTTGAGGAAAA
____________________________________________________________
consensus AAGTCAGATTAACTTCACCACCTCGTTGTGGAAGAGTACTAGGATCATTCTTGAGGAAAA
. : . : . : . : . : . :
JMFS148F03+ CTAAAGATGTGCGTGTGAGAATGAACCAACGCTTTTTCCATGACTTCCAACCTAGTCC-T
JMFS141B10+ CTAAAGATGTGCGTGTGAGAATGAACCAACGCTTTTTCCATGACTTCCAACCTAGTCCTT
JMFS009A02+ CTAAAGATGTGCGTGTGAGAATGAACCAACGCTTTTTCCATGACTTCCAACCTAGTCCTT
JMFS166D02+ CTAAAGATGTGCGTGTGAGAATGAACCAACGCTTTTTCCATGACTTCCAACCTAGTCCTT
JMFS041A02+ CTAAAGATGTGCGTGTGAGAATGAACCAACGCTTTTTCCATGACTTCCAACCTAGTCCTT
JMSF009H24+ TGAGAATGAACCAACGCTTTTTCCATGACTTCCAACCTAGTCCTT
JMFS093B10+ CTAAAGATGTGCGTGTGAGAATGAACCAACGCTTTTTCCATGACTTCCAACCTAGTCCTT
JMFS159B08+ CTAAAGATGTGCGTGTGAGAATGAACCAACGCTTTTTCCATGACTTCCAACCTAGTCCTT
JMSF028H02+ CTAAAGATGTGCGTGTGAGAATGAACCAACGCTTTTTCCATGACTTCCAACCTAGTCCTT
____________________________________________________________
consensus CTAAAGATGTGCGTGTGAGAATGAACCAACGCTTTTTCCATGACTTCCAACCTAGTCCTT
. : . : . : . : . : . :
JMFS148F03+ TTGAAGAGATGAATAGTGGCCCACTCTTGAAAACCGTATTAGAGGTTCCGACCCGAGGTC
JMFS141B10+ TTGAAGAGATGAATAGTGGCCCACTCTTGAAAACCGTATTAGAGGTTCCGACCCGAGGTC
JMFS009A02+ TTGAAGAGATGAATAGTGGCCCACTCTTGAAAACCGTATTAGAGGTTCCGACCCGAGGTC
JMFS166D02+ TTGAAGAGATGAATAGTGGCCCACTCTTGAAAACCGTATTAGAGGTTCCGACCCGAGGTC
JMFS041A02+ TTGAAGAGATGAATAGTGGCCCACTCTTGAAAACCGTATTAGAGGTTCCGACCGGAGGTC
JMSF009H24+ TTGAAGAGATGAATAGTGGCCCACTCTTGAAAACCGTATTAGAGGTTCCGACCCGAGGTC
JMFS093B10+ TTGAAGAGATGAATAGTGGCCCACTCTTGAAAACCGTATTAGAGGTTCCGACCCGAGGTC
JMFS159B08+ TTGAAGAGATGAATAGTGGCCCACTCTTGAAAACCGTATTAGAGGTTCCGACCCGAGGTC
JMSF028H02+ TTGAAGAGATGAATAGTGGCCCACTCTTGAAAACCGTATTAGAGGTTCCGACCCGAGGTC
____________________________________________________________
consensus TTGAAGAGATGAATAGTGGCCCACTCTTGAAAACCGTATTAGAGGTTCCGACCCGAGGTC
. : . : . : . : . : . :
JMFS148F03+ GCTCAAATGCAGCGAGCGAGGCCGACATTTCCATGAATCAATCGAAGGTGAAGGTCATGG
JMFS141B10+ GCTCAAATGCAGCGAGCGAGGCCGACATTTCCATGAATCAATCGAAGGTGAAGGTCATGG
JMFS009A02+ GCTCAAATGCAGCGAGCGAGGCCGACATTTCCATGAATCAATCGAAGGTGAAGGTCATGG
JMFS166D02+ GCTCAAATGCAGCGAGCGAGGCCGACATTTCCATGAATCAATCGAAGGTGAAGGTCATGG
JMFS041A02+ GCTCAAATGCAGCGAGCGAGGCCGACATTTCCATGAATCAATCGAAGGTGAAGGTCATGG
JMSF009H24+ GCTCAAATGCAGCGAGCGAGGCCGACATTTCCATGAATCAATCGAAGGTGAAGGTCATGG
JMFS093B10+ GCTCAAATGCAGCGAGCGAGGCCGACATTTCCATGAATCAATCGAAGGTGAAGGTCATGG
JMFS159B08+ GCTCAAATGCAGCGAGCGAGGCCGACATTTCCATGAATCAATCGAAGGTGAAGGTCATGG
JMSF028H02+ GCTCAAATGCAGCGAGCGAGGCCGACATTTCCATGAATCAATCGAAGGTGAAGGTCATGG
____________________________________________________________
consensus GCTCAAATGCAGCGAGCGAGGCCGACATTTCCATGAATCAATCGAAGGTGAAGGTCATGG
. : . : . : . : . : . :
JMFS148F03+ CAGCTGGGAGATCACAGAGCTAAGCTCAGGCGGAGATCTAAAGGAGATGCGTAGGGTTTG
JMFS141B10+ CAGCTGGGAGATCACAGAGCTAAGCTCAGGCGGAGATCTAAAGGAGATGCGTAGGGTTTG
JMFS009A02+ CAGCTGGGAGATCACAGAGCTAAGCTCAGGCGGAGATCTAAAGGAGATGCGTAGGGTTTG
JMFS166D02+ CAGCTGGGAGATCACAGAGCTAAGCTCAGGCGGAGATCTAAAGGAGATGCGTAGGGTTTG
JMFS041A02+ CAGCTGGGAGATCACAGAGCTAAGCTCAGGCGGAGATCTAAAGGAGATGCGTAGGGTTTG
JMSF009H24+ CAGCTGGGAGATCACAGAGCTAAGCTCAGGCGGAGATCTAAAGGAGATGCGTAGGGTTTG
JMFS093B10+ CAGCTGGGAGATCACAGAGCTAAGCTCAGGCGGAGATCTAAAGGAGATGCGTAGGGTTTG
JMFS159B08+ CAGCTGGGAGATCACAGAGCTAAGCTCAGGCGGAGATCTAAAGGAGATGCGTAGGGTTTG
JMSF028H02+ CAGCTGGGAGATCACAGAGCTAAGCTCAGGCGGAGATCTAAAGGAGATGCGTAGGGTTTG
____________________________________________________________
consensus CAGCTGGGAGATCACAGAGCTAAGCTCAGGCGGAGATCTAAAGGAGATGCGTAGGGTTTG
. : . : . : . : . : . :
JMFS148F03+ ACGAAGAACAGATTGGAG
JMFS141B10+ ACGAAGAACAGATTGGAGGAGGAGATGCA
JMFS009A02+ ACGAAGAACAGATTGGAGGAGGAGATGCAGCAG
JMFS166D02+ ACGAAGAACAGATTGGAGGAGGAGATGCAGCAGCAGCAACCAAACCAACAGAGC-TTATT
JMFS041A02+ ACGAAGAACAGATTGGAGGAGGAGATGCAGCAGCAGCAACCAAACCAACAGAGC-TTATT
JMSF009H24+ ACGAAGAACAGATTGGAGGAGGAGATGCAGCAGCAGCAACCAAACCAAC
JMFS093B10+ ACGAAGAACAGATTGGAGGAGGAGATGCAGCAGCAGCAACCAAACCAACAGAGCTTTATT
JMFS159B08+ ACCAAGAACAGATTGGAGGAGGAGA
JMSF028H02+ ACGAAGAACAGATTGGAGGAGGAGATGCAGCAGCAGCAACCAAACCAACAGAGCTTTATT
____________________________________________________________
consensus ACGAAGAACAGATTGGAGGAGGAGATGCAGCAGCAGCAACCAAACCAACAGAGCTTTATT
. : . : . : . : . : . :
JMFS166D02+ TTCTGAGTCTGTCTTTTTG
JMFS041A02+ TTCTGAGTCTGTCTTTTTGTTCGCTTGT
JMFS093B10+ TTCTGAGTCTGTCTTTTTGTTCGCTTGT
JMSF028H02+ TTCTGAGTCTGTCTTTTTGTTCGCTTGTGATAGAGAGAGAGAGAGGAAGAAACCCCGATC
____________________________________________________________
consensus TTCTGAGTCTGTCTTTTTGTTCGCTTGTGATAGAGAGAGAGAGAGGAAGAAACCCCGATC