Contig 009383:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF028F11-                                                                    CA
                      ____________________________________________________________
consensus                                                                       CA
 
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rJMSF028F11-          TGGACTGGTAGAGTCTTAATACTAAGGAGTACAATTTTGTTTTCCATACATGCATTTAAA
rJMSF028E12-                                           ATTTTGTTTTCCATACATGCATTTAAA
                      ____________________________________________________________
consensus             TGGACTGGTAGAGTCTTAATACTAAGGAGTACAATTTTGTTTTCCATACATGCATTTAAA
 
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rJMSF028F11-          ACTTAAACAAAACAACCCATCCGAGCAAACACGATACTCAATTGGATTAATCTCATCCCG
rJMSF028E12-          ACTTAAACAAAACAACCCATCCGAGCAAACACGATACTCAATTGGATTAATCTCATCCCG
                      ____________________________________________________________
consensus             ACTTAAACAAAACAACCCATCCGAGCAAACACGATACTCAATTGGATTAATCTCATCCCG
 
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rJMSF028F11-          CTAAATGCGAATACAGTACAGTGCAGTATGAGGAAACCCTAGCTAGAACATGCATGCATG
rJMSF028E12-          CTAAATGCGAATACAGTACAGTGCAGTATGAGGAAACCCTAGCTAGAACATGCATGCATG
                      ____________________________________________________________
consensus             CTAAATGCGAATACAGTACAGTGCAGTATGAGGAAACCCTAGCTAGAACATGCATGCATG
 
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rJMSF028F11-          TTCATCAATTCAGTGATGATGGACAACAAAGGACCTGAGATGAGACATCATTTCATGAGT
rJMSF028E12-          TTCATCAATTCAGTGATGATGGACAACAAAGGACCTGAGATGAGACATCATTTCATGAGT
                      ____________________________________________________________
consensus             TTCATCAATTCAGTGATGATGGACAACAAAGGACCTGAGATGAGACATCATTTCATGAGT
 
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rJMSF028F11-          TCTGGGGTGAGAAAGAGGAGAGTTGTGAAGAATCTGAAATGCATGGCCGACTCCTTTATA
rJMSF028E12-          TCTGGGGTGAGAAAGAGGAGAGTTGTGAAGAATCTGAAATGCATGGCCGACTCCTTTATA
                      ____________________________________________________________
consensus             TCTGGGGTGAGAAAGAGGAGAGTTGTGAAGAATCTGAAATGCATGGCCGACTCCTTTATA
 
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rJMSF028F11-          CACCACCTTTTCAACCGCCGTCCCCATGGCGGCGCAAAATCCTATGTTCCTGTCTTTAAG
rJMSF028E12-          CACCACCTTTTCAACCGCCGTCCCCATGGCGGCGCAAAATCCTATGTTCCTGTCTTTAAG
                      ____________________________________________________________
consensus             CACCACCTTTTCAACCGCCGTCCCCATGGCGGCGCAAAATCCTATGTTCCTGTCTTTAAG
 
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rJMSF028F11-          AATATCCATTTCTGATATGCACACCATTGTGGGCGGAAGTAGTTTCAAATTGTTCATTCT
rJMSF028E12-          AATATCCATTTCTGATATGCACACCATTGTGGGCGGAAGTAGTTTCAAATTGTTCATTCT
                      ____________________________________________________________
consensus             AATATCCATTTCTGATATGCACACCATTGTGGGCGGAAGTAGTTTCAAATTGTTCATTCT
 
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rJMSF028F11-          CGTCGCCGCCGCCAAAGGATTGCACCATGGGTGGTCGCGGCTGCAGCCCTCCGGCAGCGC
rJMSF028E12-          CGTCGCCGCCGCCAAAGGATTGCACCATGGGTGGTCGCGGCTGCAGCCCTCCGGCAGCGC
                      ____________________________________________________________
consensus             CGTCGCCGCCGCCAAAGGATTGCACCATGGGTGGTCGCGGCTGCAGCCCTCCGGCAGCGC
 
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rJMSF028F11-          CAGCGCCCAGTACGCGTCGGAGGCCGCCAAAGTCAGGGCGGAGAACGGCGGCTGAGCCGC
rJMSF028E12-          CAGCGCCCAGTACGCGTCGGAGGCCGCCAAAGTCAGGGCGGAGAACGGCGGCTGAGCCGC
                      ____________________________________________________________
consensus             CAGCGCCCAGTACGCGTCGGAGGCCGCCAAAGTCAGGGCGGAGAACGGCGGCTGAGCCGC
 
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rJMSF028F11-          ATGTTTCTCCGAGTTCGTACGCGCCTCGCCTCCGAAAAACGGCTGGATCAGAACCAAACC
rJMSF028E12-          ATGTTTCTCCGAGTTCGTACGCGCCTCGCCTCCGAAAAACGGCTGGATCAGAACCAAACC
                      ____________________________________________________________
consensus             ATGTTTCTCCGAGTTCGTACGCGCCTCGCCTCCGAAAAACGGCTGGATCAGAACCAAACC
 
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rJMSF028F11-          CTTGNACGCCGCCGCCGCCATTGGCGGCGGCGGCGGCGCTTGTCGTGTTATTATTAATAA
rJMSF028E12-          CTTG-ACGCCGCCGCCGCCATTGGCGGCGGCGGCGGCGCTTGTCGTGTTATTATTAATAA
                      ____________________________________________________________
consensus             CTTGNACGCCGCCGCCGCCATTGGCGGCGGCGGCGGCGCTTGTCGTGTTATTATTAATAA
 
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rJMSF028F11-          GCCTCGACGCAACGTTGTACGCTATGTTGGCGCCGGCGCTGTCGCCGGCGAGGAAAATCC
rJMSF028E12-          GCCTCGACGCAACGTTGTACGCTATGTTGGCGCCGGCGCTGTCGCCGGCGA-GAAAATCC
JMSF028F11+                                                                 AAATCC
JMSF028E12+                                                               GAAAATCC
                      ____________________________________________________________
consensus             GCCTCGACGCAACGTTGTACGCTATGTTGGCGCCGGCGCTGTCGCCGGCGAGGAAAATCC
 
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rJMSF028F11-          TANAAAAATCGCACTTGTCCGTCCAC                                  
rJMSF028E12-          TAGAAAAATCGCACTTGTCCGTCCACCAGCTTANACTATCACGGCCGG            
JMSF028F11+           TAGAAAAATCGCACTTGTCCGTCCACCAGCTTAGACTATCACGGCCGGCGCCGGAATAAC
JMSF028E12+           TAGAAAAATCGCACTTGTCCGTCCACCAGCTTAGACTATCACGGCCGGCGCCGGAATAAC
                      ____________________________________________________________
consensus             TAGAAAAATCGCACTTGTCCGTCCACCAGCTTAGACTATCACGGCCGGCGCCGGAATAAC
 
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JMSF028F11+           TTTTGCTGGCCTGTTGCTTCACCCACGCCACAGCCCGGACGCCGTCGTCGTAGGCGGCCG
JMSF028E12+           TTTTGCTGGCCTGTTGCTTCACCCACGCCACAGCCCGGACGCCGTCGTCGTAGGCGGCCG
                      ____________________________________________________________
consensus             TTTTGCTGGCCTGTTGCTTCACCCACGCCACAGCCCGGACGCCGTCGTCGTAGGCGGCCG
 
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JMSF028F11+           GGAGGCGGTGCTCCGGCGCCAGGCGATAATTCACGGACACTGTCACGCACGGAATCTGCG
JMSF028E12+           GGAGGCGGTGCTCCGGCGCCAGGCGATAATTCACGGACACTGTCACGCACGGAATCTGCG
                      ____________________________________________________________
consensus             GGAGGCGGTGCTCCGGCGCCAGGCGATAATTCACGGACACTGTCACGCACGGAATCTGCG
 
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JMSF028F11+           ACGAAAGATTCGCCAAGAATTCATGGTAACACTTCCATGCAGCGGATCCGACGCAAAACC
JMSF028E12+           ACGAAAGATTCGCCAAGAATTCATGGTAACACTTCCATGCAGCGGATCCGACGCAAAACC
                      ____________________________________________________________
consensus             ACGAAAGATTCGCCAAGAATTCATGGTAACACTTCCATGCAGCGGATCCGACGCAAAACC
 
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JMSF028F11+           CACCTCCATGAAAGTAAACAAGAACCGGTAACCTCCCCGCCGGAAAGCCGCTAGGGACAT
JMSF028E12+           CACCTCCATGAAAGTAAACAAGAACCGGTAACCTCCCCGCCGGAAAGCCGCTAGGGACAT
                      ____________________________________________________________
consensus             CACCTCCATGAAAGTAAACAAGAACCGGTAACCTCCCCGCCGGAAAGCCGCTAGGGACAT
 
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JMSF028F11+           AAACGCGTGCCCATAATCTGGAAGGGTCGAAAATGGCGACGTCCCCGCATGTAATTCCCA
JMSF028E12+           AAACGCGTGCCCATAATCTGGAAGGGTCGAAAATGGCGACGTCCCCGCATGTAATTCCCA
                      ____________________________________________________________
consensus             AAACGCGTGCCCATAATCTGGAAGGGTCGAAAATGGCGACGTCCCCGCATGTAATTCCCA
 
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JMSF028F11+           GATGTTGAGGAAGACTACTAGCGGCGACGTTCGGAACGATTGAGGATCTTTCCACACGTC
JMSF028E12+           GATGTTGAGGAAGACTACTAGCGGCGACGTTCGGAACGATTGAGGATCTTTCCACACGTC
                      ____________________________________________________________
consensus             GATGTTGAGGAAGACTACTAGCGGCGACGTTCGGAACGATTGAGGATCTTTCCACACGTC
 
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JMSF028F11+           CATCGTTGTAAACCGTGATCAGACCTTCGATTTCAGCCATGATTCCTCCATTCGGGTGGT
JMSF028E12+           CATCGTTGTAAACCGTGATCAGACCTTCGATTTCAGCCATGATTCCTCCATTCGGGTGGT
                      ____________________________________________________________
consensus             CATCGTTGTAAACCGTGATCAGACCTTCGATTTCAGCCATGATTCCTCCATTCGGGTGGT
 
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JMSF028F11+           GGGTGTTCTTCCCTATCTGGAGATTTGCCCTCGGATCATAGGTGGAAACTGCAGTCACCA
JMSF028E12+           GGGTGTTCTTCCCTATCTGGAGATTTGCCCTCGGATCATAGGTGGAAACTGCAGTCACCA
                      ____________________________________________________________
consensus             GGGTGTTCTTCCCTATCTGGAGATTTGCCCTCGGATCATAGGTGGAAACTGCAGTCACCA
 
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JMSF028F11+           TTTTTAAGGTTTGTAGGTTTTTACTAGGTTTGATGTTTTCTTGTTTTGGTGAGACTTTAG
JMSF028E12+           TTTTTAAGGTTTGTAGGTTTTTACTAGGTTTGATGTTTTCTTGTTTTGGTGAGACTTTAG
                      ____________________________________________________________
consensus             TTTTTAAGGTTTGTAGGTTTTTACTAGGTTTGATGTTTTCTTGTTTTGGTGAGACTTTAG
 
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JMSF028F11+           GAGTACAGTGAATGGAAATGGTTTCTTGTCTCCTTTTGTGTTTGTGTGTGTGGTTGCTTC
JMSF028E12+           GAGTACAGTGAATGGAAATGGTTTCTTGTCTCCTTTTGTGTTTGTGTGTGTGGTTGCTTC
                      ____________________________________________________________
consensus             GAGTACAGTGAATGGAAATGGTTTCTTGTCTCCTTTTGTGTTTGTGTGTGTGGTTGCTTC