Contig 009381:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028E18Sequence351009381 (5)ref|XP_009771645.1|3e-48PREDICTED: nucleobase-ascorbate transporter 1 [Nicotiana sylvestris]652013992 (6)ref|XP_006469619.1|4e-121PREDICTED: nucleobase-ascorbate transporter 1-like isoform X3 [Citrus sinensis]
JMFF028G01Sequence459009381 (5)ref|XP_009771645.1|1e-47PREDICTED: nucleobase-ascorbate transporter 1 [Nicotiana sylvestris]707013992 (6)ref|XP_006469619.1|2e-131PREDICTED: nucleobase-ascorbate transporter 1-like isoform X3 [Citrus sinensis]
JMSF028A11Sequence675009381 (5)ref|XP_009771645.1|2e-92PREDICTED: nucleobase-ascorbate transporter 1 [Nicotiana sylvestris]769013992 (6)ref|XP_006469619.1|1e-73PREDICTED: nucleobase-ascorbate transporter 1-like isoform X3 [Citrus sinensis]
JMSF033C10Sequence676009381 (5)ref|XP_009771645.1|4e-93PREDICTED: nucleobase-ascorbate transporter 1 [Nicotiana sylvestris]745013992 (6)ref|XP_006469619.1|8e-75PREDICTED: nucleobase-ascorbate transporter 1-like isoform X3 [Citrus sinensis]
JMSF038E09Sequence666009381 (5)ref|XP_009771645.1|2e-88PREDICTED: nucleobase-ascorbate transporter 1 [Nicotiana sylvestris]895013992 (6)ref|XP_006469619.1|2e-118PREDICTED: nucleobase-ascorbate transporter 1-like isoform X3 [Citrus sinensis]

Alignment

This contig is upended


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JMSF033C10+                                                       ACTGAAAAAACGTGAA
JMSF038E09+                                                                 CGTGAA
JMSF028A11+                                                        CTGAAAAAACGTGAA
                      ____________________________________________________________
consensus                                                         ACTGAAAAAACGTGAA
 
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JMSF033C10+           AACAGACCCCAAACTTGGCTGTACCCCAAGATTATTTGAATGCTTGACGCAACAATCAAC
JMSF038E09+           AACAGACCCCAAACTTGGCTGTACCCCANGATTATTTGAATGCTTGACGCAACAATCAAC
JMSF028A11+           AACAGACCCCAAACTTGGCTGTACCCCAAGATTATTTGAATGCTTGACGCAACAATCAAC
                      ____________________________________________________________
consensus             AACAGACCCCAAACTTGGCTGTACCCCAAGATTATTTGAATGCTTGACGCAACAATCAAC
 
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JMSF033C10+           GCTCCTTGGATCGCCCTCATGGTTTGTATAAATCTTATATGTGGCTCACTTATCCGTTGA
JMSF038E09+           GCTCCTTGGATCGCCCTCATGGTTTGTATAAATCTTATATGTGGCTCACTTATCCGTTGA
JMSF028A11+           GCTCCTTGGATCGCCCTCATGGTTTGTATAAATCTTATATGTGGCTCACTTATCCGTTGA
                      ____________________________________________________________
consensus             GCTCCTTGGATCGCCCTCATGGTTTGTATAAATCTTATATGTGGCTCACTTATCCGTTGA
 
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JMSF033C10+           AGAGATGAATCGCTAATAATATAGACTATGGGGATAACATATGCAAAGGATCCTCCAACT
JMSF038E09+           AGAGATGAATCGCTAATAATATAGACTATGGGGATAACATATGCAAAGGATCCTCCAACT
JMSF028A11+           AGAGATGAATCGCTAATAATATAGACTATGGGGATAACATATGCAAAGGATCCTCCAACT
                      ____________________________________________________________
consensus             AGAGATGAATCGCTAATAATATAGACTATGGGGATAACATATGCAAAGGATCCTCCAACT
 
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JMSF033C10+           ACAGCTGGCAATCGGGTTCCAAAGAGTGCTTGGAGAAGAGTGTTTATTCCAGCAACAAAA
JMSF038E09+           ACAGCTGGCAATCGGGTTCCAAAGAGTGCTTGGAGAAGAGTGTTTATTCCAGCAACAAAA
JMFF028G01+               CTGGCAATCGGGTTCCAAAGAGTGCTTGGAGAAGAGTGTTTATTCCAGCAACAAAA
JMFF028E18+              GCTGGCAATCGGGTTCCAAAGAGTGCTTGGAGAAGAGTGTTTATTCCAGCAACAAAA
JMSF028A11+           ACAGCTGGCAATCGGGTTCCAAAGAGTGCTTGGAGAAGAGTGTTTATTCCAGCAACAAAA
                      ____________________________________________________________
consensus             ACAGCTGGCAATCGGGTTCCAAAGAGTGCTTGGAGAAGAGTGTTTATTCCAGCAACAAAA
 
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JMSF033C10+           AGCAAAGTTTGTATTACCCGTGCCTTGTCCCCGTCGGATCCACCCATTAGTGGTACAAGC
JMSF038E09+           AGCAAAGTTTGTATTACCCGTGCCTTGTCCCCGTCGGATCCACCCATTAGTGGTACAAGC
JMFF028G01+           AGCAAAGTTTGTATTACCCGTGCCTTGTCCCCGTCGGATCCACCCATTAGTGGTACAAGC
JMFF028E18+           AGCAAAGTTTGTATTACCCGTGCCTTGTCCCCGTCGGATCCACCCATTAGTGGTACAAGC
JMSF028A11+           AGCAAAGTTTGTATTACCCGTGCCTTGTCCCCGTCGGATCCACCCATTAGTGGTACAAGC
                      ____________________________________________________________
consensus             AGCAAAGTTTGTATTACCCGTGCCTTGTCCCCGTCGGATCCACCCATTAGTGGTACAAGC
 
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JMSF033C10+           AGTGTAGGGATCATCGCACTTGTCCCAAGTACTAATATGTAATTTTGAAACGCTAACAAT
JMSF038E09+           AGTGTAGGGATCATCGCACTTGTCCCAAGTANTAATATGTAATTTTGAAACGCTAACAAT
JMFF028G01+           AGTGTAGGGATCATCGCACTTGTCCCAAGTACTAATATGTAATTTTGAAACGCTAACAAT
JMFF028E18+           AGTGTAGGGATCATCGCACTTGTCCCAAGTACTAATATGTAATTTTGAAACGCTAACAAT
JMSF028A11+           AGTGTAGGGATCATCGCACTTGTCCCAAGTACTAATATGTAATTTTGAAACGCTAACAAT
                      ____________________________________________________________
consensus             AGTGTAGGGATCATCGCACTTGTCCCAAGTACTAATATGTAATTTTGAAACGCTAACAAT
 
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JMSF033C10+           ATGGTTTCAGGCCATGGAGGGTTAGAGTCTATGCAGTACTCGAGGTCCNGGAGTTGCTCC
JMSF038E09+           ATGGTTTCAGGCCATGGAGGGTTAGAGTCTATGCAGTACTCGAGGTCCNGGAGTTGCTCC
JMFF028G01+           ATGGTTTCAGGCCATGGAGGGTTAGAGTCTATGCAGTACTCGAGGTCCTGGAGTTGCTCC
JMFF028E18+           ATGGTTTCAGGCCATGGAGGGTTAGAGTCTATGCAGTACTCGAGGTCCTGGAGTTGCTCC
JMSF028A11+           ATGGTTTCAGGCCATGGAGGGTTAGAGTCTATGCAGTACTCGAGGTCCNGGAGTTGCTCC
                      ____________________________________________________________
consensus             ATGGTTTCAGGCCATGGAGGGTTAGAGTCTATGCAGTACTCGAGGTCCTGGAGTTGCTCC
 
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JMSF033C10+           ATAGGAGGGTGAGCAATCTCTGCCATTGCCATTGGTGAAGGTGGAGGATCACCAAGAACT
JMSF038E09+           ATAGGAGGGTGAGCAATCTCTGCCATTGCCATTGGTGAAGGTGGAGGATCACCAAGAACT
JMFF028G01+           ATAGGAGGGTGAGCAATCTCTGCCATTGCCATTGGTGAAGGTGGAGGATCACCAAGAACT
JMFF028E18+           ATAGGAGGGTGAGCAATCTCTGCCATTGCCATTGGTGAAGGTGGAGGATCACCAAGAACT
JMSF028A11+           ATAGGAGGGTGAGCAATCTCTGCCATTGCCATTGGTGAAGGTGGAGGATCACCAAGAACT
                      ____________________________________________________________
consensus             ATAGGAGGGTGAGCAATCTCTGCCATTGCCATTGGTGAAGGTGGAGGATCACCAAGAACT
 
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JMSF033C10+           CGTCTGTTTCACTGTCTTACACACAAAGAATCAAACACAAGAAAGAACGATAATGCAAAA
JMSF038E09+           CGTCTGTTTCACTGTCTTACACACAAAGAATCAAACACANGAAAGAACGATAATGCAAAA
JMFF028G01+           CGTCTGTTTCACTGTCTTACACACAAAGAATCAAACACAAGAAAGAACGATAATGCAAAA
JMFF028E18+           CGTCTGTTTCACTGTCTTACACACAAAGAATCAAACACAAGAAAGAACGATAAT      
JMSF028A11+           CGTCTGTTTCACTGTCTTACACACAAAGAATCAAACACAAGAAAGAACGATAATGCAAAA
                      ____________________________________________________________
consensus             CGTCTGTTTCACTGTCTTACACACAAAGAATCAAACACAAGAAAGAACGATAATGCAAAA
 
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JMSF033C10+           GAGAAAAAGGACAGAATATTTGAGAAGAAGCTAATAAAAACAAGGAGGAGAAAGTAGAGA
JMSF038E09+           GAGAAAAAGGACAGAATATTTGAGAAGAAGCTAATAAAAACAAGGAGGAGAAAGTAGAGA
JMFF028G01+           GAGAAAAAGGACAGAATATTTGAGAAGAAGCTAATAAAAACAAGGAGGAGAAAGTAGAGA
JMSF028A11+           GAGAAAAAGGACAGAATATTTGAGAAGAAGCTAATAAAAACAAGGAGGAGAAAGTAGAGA
                      ____________________________________________________________
consensus             GAGAAAAAGGACAGAATATTTGAGAAGAAGCTAATAAAAACAAGGAGGAGAAAGTAGAGA
 
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JMSF033C10+           GAGAGAGAGAGAGAGAGGAGAGCAAAAGAAGAAAGTAAAGCACCCAGGCAGAGCAGGGCC
JMSF038E09+           GAGAGAGAGAGAGAGAGGAGAGCAAAAGAAGAAAGTAAAGCACCCAGGCAGAGCAGGGCC
JMFF028G01+           GAGAGAGAGAGAGAGAGGAGAGCAAAAGAAGAAAGTAAAGCAC                 
JMSF028A11+           GAGAGAGAGAGAGAGAGGAGAGCAAAAGAAGAAAGTAAAGCACCCAGGCAGAGCAGGGCC
                      ____________________________________________________________
consensus             GAGAGAGAGAGAGAGAGGAGAGCAAAAGAAGAAAGTAAAGCACCCAGGCAGAGCAGGGCC