Contig 009374:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015L12Sequence498009374 (2)ref|XP_006471307.1|145PREDICTED: uncharacterized protein LOC102611747 [Citrus sinensis]777021421ref|XP_002532007.1|6e-16conserved hypothetical protein [Ricinus communis] gb|EEF30380.1| conserved hypot
JMSF027J06Sequence643009374 (2)ref|XP_006471307.1|165PREDICTED: uncharacterized protein LOC102611747 [Citrus sinensis]722023548ref|XP_006467327.1|141PREDICTED: uncharacterized protein LOC102625297 [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF027J06+ GATATGCGGCCATTAAAGTCTTTAGCAAAATTCTTCCTCCAAT
                      ____________________________________________________________
consensus GATATGCGGCCATTAAAGTCTTTAGCAAAATTCTTCCTCCAAT
 
. : . : . : . : . : . :
JMSF027J06+ TCCAAATCACCTTTCCACATGTGCCTATTCTGTCAAGGAGGTGGTAACCACGAGACCGAG
                      ____________________________________________________________
consensus TCCAAATCACCTTTCCACATGTGCCTATTCTGTCAAGGAGGTGGTAACCACGAGACCGAG
 
. : . : . : . : . : . :
JMSF015L12+ TTCTCTACAAATTGAATCCCTGAGCCACATATTTTCGAACC
JMSF027J06+ CCCAGCTTTGAATCATTATTTCTCTACAAATTGAATCCCTGAGCCACATATTTTCGAACC
                      ____________________________________________________________
consensus CCCAGCTTTGAATCATTATTTCTCTACAAATTGAATCCCTGAGCCACATATTTTCGAACC
 
. : . : . : . : . : . :
JMSF015L12+ GGAACCTGCCTTTGGGAGTGGGAATATCCGGAGTAAGTAATTGGAGATGAAGGGGCGAGT
JMSF027J06+ GGAACCTGCCTTTGGGAGTGGGAATATCCGGAGTAAGTAATTGGAGATGAAGGGGCGAGT
                      ____________________________________________________________
consensus GGAACCTGCCTTTGGGAGTGGGAATATCCGGAGTAAGTAATTGGAGATGAAGGGGCGAGT
 
. : . : . : . : . : . :
JMSF015L12+ GGTCACTCTTGGTGGCAATAATAGAACTAGCCATCGCCTGAGAGAATGAGTCGCGCCACG
JMSF027J06+ GGTCACTCTTGGTGGCAATAATAGAACTAGCCATCGCCTGAGAGAATGAGTCGCGCCACG
                      ____________________________________________________________
consensus GGTCACTCTTGGTGGCAATAATAGAACTAGCCATCGCCTGAGAGAATGAGTCGCGCCACG
 
. : . : . : . : . : . :
JMSF015L12+ AATCCGAAACGAGGATTCGGTCCAACTTGGCTTCCACCCAGTTCGCTGTGCCCTTAGATC
JMSF027J06+ AATCCGAAACGAGGATTCGGTCCAACTTGGCTTCCACCCAGTTCGCTGTGCCCTTAGATC
                      ____________________________________________________________
consensus AATCCGAAACGAGGATTCGGTCCAACTTGGCTTCCACCCAGTTCGCTGTGCCCTTAGATC
 
. : . : . : . : . : . :
JMSF015L12+ GTTCCCATGTAAATTGATGAACTTGAAAAGGAAAATCACTCAGTCCGCTACATTCAACTA
JMSF027J06+ GTTCCCATGTAAATTGATGAACTTGAAAAGGAAAATCACTCAGTCCGCTACATTCAACTA
                      ____________________________________________________________
consensus GTTCCCATGTAAATTGATGAACTTGAAAAGGAAAATCACTCAGTCCGCTACATTCAACTA
 
. : . : . : . : . : . :
JMSF015L12+ CGTCAGAGAAGCCTTCGATAAGTCTCCTTGGCTGGTGATTGCCCCCTCTCTTCTCGTCTG
JMSF027J06+ CGTCAGAGAAGCCTTCGATAAGTCTCCTTGGCTGGTGATTGCCCCCTCTCTTCTCGTCTG
                      ____________________________________________________________
consensus CGTCAGAGAAGCCTTCGATAAGTCTCCTTGGCTGGTGATTGCCCCCTCTCTTCTCGTCTG
 
. : . : . : . : . : . :
JMSF015L12+ GGCTAAGGATGTCATTGAAGTCACCCATAACTACCTAAGGGAGAGAGTTGACAGTAGATA
JMSF027J06+ GGCTAAGGATGTCATTGAAGTCACCCATAACTACCTAAGGGAGAGAGTTGACAGTAGATA
                      ____________________________________________________________
consensus GGCTAAGGATGTCATTGAAGTCACCCATAACTACCTAAGGGAGAGAGTTGACAGTAGATA
 
. : . : . : . : . : . :
JMSF015L12+ AGTGCTTCAAAAGGTTCCGTGATTCAGCTCGCCTGTGTCTTTCCGGGACTCCATAGAATC
JMSF027J06+ AGTGCTTCAAAAGGTTCCGTGATTCAGCTCGCCTGTGTCTTTCCGGGACTCCATAGAATC
                      ____________________________________________________________
consensus AGTGCTTCAAAAGGTTCCGTGATTCAGCTCGCCTGTGTCTTTCCGGGACTCCATAGAATC
 
. : . : . : . : . : . :
JMSF015L12+ TGGTGAATCTCCATTTGGTCCCACCGACGCTTAGA
JMSF027J06+ TGGTGAATCTCCATTTGGTCCCACCGACGCTTAGATAGACCTCTGCGTCAATGTGATGCC
                      ____________________________________________________________
consensus TGGTGAATCTCCATTTGGTCCCACCGACGCTTAGATAGACCTCTGCGTCAATGTGATGCC