Contig 009369:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF027E15+                                                  AGCACAAAAATTTAAGCCTTC
                      ____________________________________________________________
consensus                                                    AGCACAAAAATTTAAGCCTTC
 
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JMSF027E15+           CATGGCAAGTACATAGAGAGAAACTTTGACTGAGTTTTGCATAGTCTAAATACCAAGCAT
                      ____________________________________________________________
consensus             CATGGCAAGTACATAGAGAGAAACTTTGACTGAGTTTTGCATAGTCTAAATACCAAGCAT
 
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JMSF027E15+           TCTTCTAATACTTTAACAATACTACAAAAAGAAACAAGTTTACATCCCAGTGAAAGCCTT
                      ____________________________________________________________
consensus             TCTTCTAATACTTTAACAATACTACAAAAAGAAACAAGTTTACATCCCAGTGAAAGCCTT
 
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JMFN034K23+                              GCAGGAATAACCTTCAACACGTTGAACCTCACTGTTTTGGA
JMSF027E15+           TTTCCCTCCACCTGACCCTGCAGGAATAACCTTCAACACGTTGAACCTCACTGTTTTGGA
                      ____________________________________________________________
consensus             TTTCCCTCCACCTGACCCTGCAGGAATAACCTTCAACACGTTGAACCTCACTGTTTTGGA
 
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JMFN034K23+           CAGCGGCCTGCACTGGCCAATGATAACATAATCTCCCTCTTTCACTCGGAAGCATGGAGA
JMSF027E15+           CAGCGGCCTGCACTGGCCAATGATAACATAATCTCCCTCTTTCACTCGGAAGCATGGAGA
                      ____________________________________________________________
consensus             CAGCGGCCTGCACTGGCCAATGATAACATAATCTCCCTCTTTCACTCGGAAGCATGGAGA
 
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JMFN034K23+           AATGTGAGCGGCAATGTTTGAGTGTCGCTTCTCATATCTCTGATACTTCTTGACAAAATG
JMSF027E15+           AATGTGAGCGGCAATGTTTGAGTGTCGCTTCTCATATCTCTGATACTTCTTGACAAAATG
                      ____________________________________________________________
consensus             AATGTGAGCGGCAATGTTTGAGTGTCGCTTCTCATATCTCTGATACTTCTTGACAAAATG
 
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JMFN034K23+           CAGGTAGTTGCGGCGAACAATGATAGTTCTTGTCATCTTTGCACTGTGGCATGTCCCAGC
JMSF027E15+           CAGGTAGTTGCGGCGAACAATGATAGTTCTTGTCATCTTTGCACTGTGGCATGTCCCAGC
                      ____________________________________________________________
consensus             CAGGTAGTTGCGGCGAACAATGATAGTTCTTGTCATCTTTGCACTGTGGCATGTCCCAGC
 
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JMFN034K23+           AAGGATTCTACCTCTAATAGAAACAGTGCCGGTGAATGGACACTTCTTATCAATATAGGC
JMSF027E15+           AAGGATTCTACCTCTAATAGAAACAGTGCCGGTGAATGGACACTTCTTATCAATATAGGC
                      ____________________________________________________________
consensus             AAGGATTCTACCTCTAATAGAAACAGTGCCGGTGAATGGACACTTCTTATCAATATAGGC
 
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JMFN034K23+           CCCTTCAATAGCCTCGCGTGGAGTCTTGAACCCTAGCCCTACACTCTTCCAGAAGCGATT
JMSF027E15+           CCCTTCAATAGCCTCGCGTGGAGTCTTGAACCCTAGCCCTACACTCTTCCAGAAGCGATT
                      ____________________________________________________________
consensus             CCCTTCAATAGCCTCGCGTGGAGTCTTGAACCCTAGCCCTACACTCTTCCAGAAGCGATT
 
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JMFN034K23+           TCCTCCCTTCCCGGGCCGTTTTCCTTTTCCAGTCTTCTTCGAGCTGAGAAACACTCCAGG
JMSF027E15+           TCCTCCCTTCCCGGGCCGTTTTCCTTTTCCAGTCTTCTTCGAGCTGAGAAACACTCCAGG
                      ____________________________________________________________
consensus             TCCTCCCTTCCCGGGCCGTTTTCCTTTTCCAGTCTTCTTCGAGCTGAGAAACACTCCAGG
 
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JMFN034K23+           CTGTTTCAAGAAAGCCTTCTCGGTCTG                                 
JMSF027E15+           CTGTTTCAAGAAAGCCTTCTCGGTCTGTTCTGCCATTCTGAAGCTACCGAGTCCAGTAAA
                      ____________________________________________________________
consensus             CTGTTTCAAGAAAGCCTTCTCGGTCTGTTCTGCCATTCTGAAGCTACCGAGTCCAGTAAA
 
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JMSF027E15+           GATTTCGAGGGTGAAAGGAGAAGGATAGCCGGCAACTAAAACCCAGAGCGATGCAACAGC
                      ____________________________________________________________
consensus             GATTTCGAGGGTGAAAGGAGAAGGATAGCCGGCAACTAAAACCCAGAGCGATGCAACAGC