Contig 009368:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026P21Sequence658009368 (2)ref|XP_006359272.1|166PREDICTED: uncharacterized protein LOC102585096 [Solanum tuberosum]717009368 (2)ref|XP_006359272.1|362PREDICTED: uncharacterized protein LOC102585096 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF026P21-                                            TCAACTTTACACTATCCCACAATGTC
                      ____________________________________________________________
consensus                                               TCAACTTTACACTATCCCACAATGTC
 
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rJMSF026P21-          AATACCAACTAAGTTTAACTGCTGACAAGTAATACAAGTGTGCTTATCCCAATCCAAGTG
                      ____________________________________________________________
consensus             AATACCAACTAAGTTTAACTGCTGACAAGTAATACAAGTGTGCTTATCCCAATCCAAGTG
 
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rJMSF026P21-          AATATGCGTGGTGTCTATCACAACTCTGCATGCTATAACTTTCTCATCTATCATAATGGA
                      ____________________________________________________________
consensus             AATATGCGTGGTGTCTATCACAACTCTGCATGCTATAACTTTCTCATCTATCATAATGGA
 
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rJMSF026P21-          ACAATTCTCATAAACACCTTCCCTCGGCGAAAGATTCAACAAACACGACTTTGGAGCTGA
                      ____________________________________________________________
consensus             ACAATTCTCATAAACACCTTCCCTCGGCGAAAGATTCAACAAACACGACTTTGGAGCTGA
 
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rJMSF026P21-          CACCCTACATCTATCACTCGTAAACTTTTCTTGGTCTCCCACCATCAAGAAAAGCCGGTG
                      ____________________________________________________________
consensus             CACCCTACATCTATCACTCGTAAACTTTTCTTGGTCTCCCACCATCAAGAAAAGCCGGTG
 
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rJMSF026P21-          GTGGCGACCTAAAAGCTCCGACACGTACTTCATATCTCCTTTGGCAAGCGCATATCGGAC
                      ____________________________________________________________
consensus             GTGGCGACCTAAAAGCTCCGACACGTACTTCATATCTCCTTTGGCAAGCGCATATCGGAC
 
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rJMSF026P21-          ACGAGTGGACGAGACTTGTCCCCTCTCCTTTGCATCGTAAGAATATAAGCTGCTAGGATC
                      ____________________________________________________________
consensus             ACGAGTGGACGAGACTTGTCCCCTCTCCTTTGCATCGTAAGAATATAAGCTGCTAGGATC
 
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rJMSF026P21-          TTGATTCTTGTCCATGACGGAATTAATTATACAAGCCTGAATGCCGTATTCATTACAAAG
                      ____________________________________________________________
consensus             TTGATTCTTGTCCATGACGGAATTAATTATACAAGCCTGAATGCCGTATTCATTACAAAG
 
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rJMSF026P21-          CCTCAACAGGTCTGATGCATCCCCGGAAGCCTTGTACCCAAACCGGTAGTTTTCACCTGC
                      ____________________________________________________________
consensus             CCTCAACAGGTCTGATGCATCCCCGGAAGCCTTGTACCCAAACCGGTAGTTTTCACCTGC
 
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rJMSF026P21-          CACCACACCAAGTACCCCAAGGTCTTTCGACAGCTTCTCAACAAAATCACGAGGGGTGAG
                      ____________________________________________________________
consensus             CACCACACCAAGTACCCCAAGGTCTTTCGACAGCTTCTCAACAAAATCACGAGGGGTGAG
 
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rJMSF026P21-          GTATCGAACTTTTGAAAATTCTATTTGGAATTCTCTGGGGATCATTCCACCACAATAGGG
                      ____________________________________________________________
consensus             GTATCGAACTTTTGAAAATTCTATTTGGAATTCTCTGGGGATCATTCCACCACAATAGGG
 
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rJMSF026P21-          AGCCCAAGAGGAGAGAACTCTTTTGCGGTCACATTTGGCAACAATGGGAACCCTAAGTTC
JMSF026P21+             CCCAAGAGGAGAGAACTCTTTTGCGGTCACATTTGGCAACAATGGGAACCCTAAGTTC
                      ____________________________________________________________
consensus             AGCCCAAGAGGAGAGAACTCTTTTGCGGTCACATTTGGCAACAATGGGAACCCTAAGTTC
 
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rJMSF026P21-          CCAACCGAGTACTTCAGCCATTCCAACAAAT                             
JMSF026P21+           CCAACCGAGTACTTCAGCCATTCCAACAAATGAGAGTAGAAATGGAACTCCTATCTTTGC
                      ____________________________________________________________
consensus             CCAACCGAGTACTTCAGCCATTCCAACAAATGAGAGTAGAAATGGAACTCCTATCTTTGC
 
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JMSF026P21+           TGCCTGGATTGCAAGTTCCCTGTGGCCAATGTGAAGCGCCTCAAATTTACCCAAAGCTAC
                      ____________________________________________________________
consensus             TGCCTGGATTGCAAGTTCCCTGTGGCCAATGTGAAGCGCCTCAAATTTACCCAAAGCTAC
 
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JMSF026P21+           TATCCCACCTGCAACAAAGGGTAATCGTTCTTGTGGAGGCTCCTCACCATCTTCAGATCG
                      ____________________________________________________________
consensus             TATCCCACCTGCAACAAAGGGTAATCGTTCTTGTGGAGGCTCCTCACCATCTTCAGATCG
 
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JMSF026P21+           ACTTAAAGAATCAGAAAGCAAGGAGCTTTGGGTATGTACAGATTTCGGATGCACACAATT
                      ____________________________________________________________
consensus             ACTTAAAGAATCAGAAAGCAAGGAGCTTTGGGTATGTACAGATTTCGGATGCACACAATT
 
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JMSF026P21+           GTAGAAAGAAACTCCCAAGTCATTAACTTTATTAGTGCAACCACTACTGGAAGGAGTCCT
                      ____________________________________________________________
consensus             GTAGAAAGAAACTCCCAAGTCATTAACTTTATTAGTGCAACCACTACTGGAAGGAGTCCT
 
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JMSF026P21+           ATTTCTGCAGTGGAGCAATGATGGATTCCAGACAAGTACCGGCCTTAGAAGGATTCCAGA
                      ____________________________________________________________
consensus             ATTTCTGCAGTGGAGCAATGATGGATTCCAGACAAGTACCGGCCTTAGAAGGATTCCAGA
 
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JMSF026P21+           TAAGGAACCCATGATAACTTACCAGATCTACTTTCATACAATTCCAAAGGGCCCAAAATA
                      ____________________________________________________________
consensus             TAAGGAACCCATGATAACTTACCAGATCTACTTTCATACAATTCCAAAGGGCCCAAAATA
 
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JMSF026P21+           AACAACTATGGTTCCAACACTTCTCCAAGAAAAATAAATCTACTTCCAATCGAGACCTCA
                      ____________________________________________________________
consensus             AACAACTATGGTTCCAACACTTCTCCAAGAAAAATAAATCTACTTCCAATCGAGACCTCA
 
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JMSF026P21+           CGCCACTGCTGGTCAGCCGCACGTCCTCACTCCATCGCCGGTCCGCCGCACGGCACGTCA
                      ____________________________________________________________
consensus             CGCCACTGCTGGTCAGCCGCACGTCCTCACTCCATCGCCGGTCCGCCGCACGGCACGTCA
 
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JMSF026P21+           GTCTGGTCCTCTGGTTCGCAGTAGCTACGCAAGACTCTTGGGAGGGAGAGTGATAATCCC
                      ____________________________________________________________
consensus             GTCTGGTCCTCTGGTTCGCAGTAGCTACGCAAGACTCTTGGGAGGGAGAGTGATAATCCC