| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF014J09 | Sequence | 487 | 002293 (6) | ref|XP_010536443.1| | 1e-15 | PREDICTED: high mobility group B protein 9 [Tarenaya hassleriana] | 713 | 009367 (5) | ref|XP_006440388.1| | 1e-72 | hypothetical protein CICLE_v10021945mg [Citrus clementina] gb|ESR53628.1| hypoth |
| JMSF026P02 | Sequence | 618 | 009367 (5) | ref|XP_011081195.1| | 2e-43 | PREDICTED: uncharacterized protein LOC105164278 isoform X1 [Sesamum indicum] | 743 | 009367 (5) | ref|XP_011081195.1| | 2e-87 | PREDICTED: uncharacterized protein LOC105164278 isoform X1 [Sesamum indicum] |
| JMSF046C23 | Sequence | 738 | 009367 (5) | ref|XP_004245726.1| | 252 | PREDICTED: uncharacterized protein LOC101243917 [Solanum lycopersicum] | 426 | 020520 | ref|XP_009767668.1| | 125 | PREDICTED: uncharacterized protein LOC104218783 [Nicotiana sylvestris] |
| JMSF053M13 | Sequence | 662 | 009367 (5) | ref|XP_011081195.1| | 4e-64 | PREDICTED: uncharacterized protein LOC105164278 isoform X1 [Sesamum indicum] | 697 | 003400 (6) | ref|XP_003635538.1| | 1e-138 | PREDICTED: elongation factor G-2, chloroplastic-like, partial [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
rJMSF014J09- ATTATAATGTTACAAATTCAATAAGAAACTCCTCAATCATCTCATTCATATAAGCT
rJMSF026P02- ATCATCTCATTCATATAAGCT
____________________________________________________________
consensus ATTATAATGTTACAAATTCAATAAGAAACTCCTCAATCATCTCATTCATATAAGCT
. : . : . : . : . : . :
rJMSF014J09- TACAATTTCATAAATGTTGCTACATAGCACAGAGATCAAAATTATAAAATTAAAAAAAAA
rJMSF026P02- TACAATTTCATAAATGTTGCTACATAGCACAGAGATCAAAATTATAAAATTAAAAAAAAA
____________________________________________________________
consensus TACAATTTCATAAATGTTGCTACATAGCACAGAGATCAAAATTATAAAATTAAAAAAAAA
. : . : . : . : . : . :
rJMSF014J09- AATTATAAACTTTTAAATGACAGGGGCATCAATGCTTAGCAAACAAAACCTAAACAGTAA
rJMSF026P02- AATTATAAACTTTTAAATGACAGGGGCATCAATGCTTAGCAAACAAAACCTAAACAGTAA
____________________________________________________________
consensus AATTATAAACTTTTAAATGACAGGGGCATCAATGCTTAGCAAACAAAACCTAAACAGTAA
. : . : . : . : . : . :
rJMSF014J09- TGTACTTGAGAACAGCAGCTCTAATCTTTTCCATGTATTCTGCTATTTCTTTCTGGTTAC
rJMSF026P02- TGTACTTGAGAACAGCAGCTCTAATCTTTTCCATGTATTCTGCTATTTCTTTCTGGTTAC
____________________________________________________________
consensus TGTACTTGAGAACAGCAGCTCTAATCTTTTCCATGTATTCTGCTATTTCTTTCTGGTTAC
. : . : . : . : . : . :
rJMSF014J09- TGTCGNGGGCACTTGCAATATTCTCATCGAGGATTGCCAGCAAGGGNGNGTTTATCTTGT
rJMSF026P02- TGTCGNGGGCACTTGCAATATTCTCATCGAGGATTGCCAGCAAGGGTGNGTTTATCTTGT
____________________________________________________________
consensus TGTCGNGGGCACTTGCAATATTCTCATCGAGGATTGCCAGCAAGGGTGNGTTTATCTTGT
. : . : . : . : . : . :
rJMSF014J09- TCNGCTCAACCATATCCAATAAAGTTGCTTTTACATTCTTTGAAGTCAAAATCATGGTTA
rJMSF026P02- TCNGCTCAACCATATCCAANAAAGTTGCTTTTACATTCTTTGAAGTCAAAATCATGGTTA
JMSF053M13+ GTCAAAATCATGGTTA
JMSF046C23+ CAACCATATCCAATAAAGTTGCTTTTACATTCTTTGAAGTCAAAATCATGGTTA
____________________________________________________________
consensus TCNGCTCAACCATATCCAATAAAGTTGCTTTTACATTCTTTGAAGTCAAAATCATGGTTA
. : . : . : . : . : . :
rJMSF014J09- AGCTTGCCCTTGCTGTAACAAGATCTGCCTGCATTTTATCATAGGCTTCTGTTCCTTCCT
rJMSF026P02- AGCTTGCCCTTGCTGTAACAAGATCTGCCNGCATTTTATCATAGGCTTCTGTTCCTTCCT
JMSF053M13+ AGCTTGCCCTTGCTGTAACAAGATCTGCCTGCATTTTATCATAGGCTTCTGTTCCTTCCT
JMSF046C23+ AGCTTGCCCTTGCTGTAACAAGATCTGCCTGCATTTTATCATAGGCTTCTGTTCCTTCCT
____________________________________________________________
consensus AGCTTGCCCTTGCTGTAACAAGATCTGCCTGCATTTTATCATAGGCTTCTGTTCCTTCCT
. : . : . : . : . : . :
rJMSF014J09- GCAATGCCCTTTGAAGTGATTCAAGCTCAATCTGTCTTTCTTCTACATCCTTGGTTTTTG
rJMSF026P02- GCAATGCCCTTTGAAGTGATTCAAGCTCAATCTGTCTTTCTTCTACATCCTTGGTTTTTG
JMSF053M13+ GCAATGCCCTTTGAAGTGATTCAAGCTCAATCTGTCTTTCTTCTACATCCTTGGTTTTTG
JMSF046C23+ GCAATGCCCTTTGAAGTGATTCAAGCTCAATCTGTCTTTCTTCTACATCCTTGGTTTTTG
JMSF026P02+ CTACATCCTTGGTTTTTG
____________________________________________________________
consensus GCAATGCCCTTTGAAGTGATTCAAGCTCAATCTGTCTTTCTTCTACATCCTTGGTTTTTG
. : . : . : . : . : . :
rJMSF014J09- ACACAGAAAACCTTAGCTTTCCCAACTCAAGTTGCAGGNGATCAAAAAAGTCTTTGTTCA
rJMSF026P02- ACACAGAAAACCTTAGCTTTCCCAACTCAAGTTGCAGGTGATCAAAAAAGTCTTTGTTCA
JMSF053M13+ ACACAGAAAACCTTAGCTTTCCCAACTCAAGTTGCAGGTGATCAAAAAAGTCTTTGTTCA
JMSF046C23+ ACACAGAAAACCTTAGCTTTCCCAACTCAAGTTGCAGGTGATCAAAAAAGTCTTTGTTCA
JMSF026P02+ ACACAGAAAACCTTAGCTTTCCCAACTCAAGTTGCAGGTGATCAAAAAAGTCTTTGTTCA
____________________________________________________________
consensus ACACAGAAAACCTTAGCTTTCCCAACTCAAGTTGCAGGTGATCAAAAAAGTCTTTGTTCA
. : . : . : . : . : . :
rJMSF014J09- ATCTTGGTCTCAATCTTGCAATCTCGAATTCAATCTCCTGGGCTTCAGTATCGAGAAAGT
rJMSF026P02- ATCTTGGTCTCAATCTTGCAATCTCGAATTCAATCTCCTGGGCTTCAGTATCGAGAAAGT
JMSF053M13+ ATCTTGGTCTCAATCTTGCAATCTCGAATTCAATCTCCTGGGCTTCAGTATCGAGAAAGT
JMSF046C23+ ATCTTGGTCTCAATCTTGCAATCTCGAATTCAATCTCCTGGGCTTCAGTATCGAGAAAGT
JMSF026P02+ ATCTTGGTCTCAATCTTGCAATCTCGAATTCAATCTCCTGGGCTTCAGTATCGAGAAAGT
____________________________________________________________
consensus ATCTTGGTCTCAATCTTGCAATCTCGAATTCAATCTCCTGGGCTTCAGTATCGAGAAAGT
. : . : . : . : . : . :
rJMSF014J09- ACTCAACCAGATCCTCTACCTTATCCGGGATAGCTCGTGACTCACGAAGAGCTCGGCGAC
rJMSF026P02- ACTCAACCAGATCCTCTACCTTATCCGGGATAGCTCGTGACTCACGAAGAGCTCGGCGAC
JMSF053M13+ ACTCAACCAGATCCTCTACCTTATCCGGGATAGCTCGTGACTCACGAAGAGCTCGGCGAC
JMSF046C23+ ACTCAACCAGATCCTCTACCTTATCCGGGATAGCTCGTGACTCACGAAGAGCTCGGCGAC
JMSF026P02+ ACTCAACCAGATCCTCTACCTTATCCGGGATAGCTCGTGACTCACGAAGAGCTCGGCGAC
____________________________________________________________
consensus ACTCAACCAGATCCTCTACCTTATCCGGGATAGCTCGTGACTCACGAAGAGCTCGGCGAC
. : . : . : . : . : . :
rJMSF014J09- GCTCTTTTTCCTCGCGGACATGGCGTTCGAATGCTTCTCTGGCTTCCTTGNCCTTCT
rJMSF026P02- GCTCTTTTTCCTCGCGGACATGGCGTTCGAATGCTTCTCTGGCTTCCTTGTCCTTCTCAA
JMSF053M13+ GCTCTTTTTCCTCGCGGACATGGCGTTCGAATGCTTCTCTGGCTTCCTTGTCCTTCTCAA
JMSF046C23+ GCTCTTTTTCCTCGCGGACATGGCGTTCGAATGCTTCTCTGGCTTCCTTGTCCTTCTCAA
JMSF026P02+ GCTCTTTTTCCTCGCGGACATGGCGTTCGAATGCTTCTCTGGCTTCCTTGTCCTTCTCAA
____________________________________________________________
consensus GCTCTTTTTCCTCGCGGACATGGCGTTCGAATGCTTCTCTGGCTTCCTTGTCCTTCTCAA
. : . : . : . : . : . :
rJMSF026P02- GCCGAGTCTTGAACTCCAGCCGGGCGATATGGCCCGATTGCGGCGGCCCCANAACTCCTT
JMSF053M13+ GCCGAGTCTTGAACTCCAGCCGGGCGATATGGCCCGATTGCGGCGGCCCCAGAACTCCTT
JMSF046C23+ GCCGAGTCTTGAACTCCAGCCGGGCGATATGGCCCGATTGCGGCGGCCCCAGAACTCCTT
JMSF026P02+ GCCGAGTCTTGAACTCCAGCCGGGCGATATGGCCCGATTGCGGCGGCCCCAGAACTCCTT
____________________________________________________________
consensus GCCGAGTCTTGAACTCCAGCCGGGCGATATGGCCCGATTGCGGCGGCCCCAGAACTCCTT
. : . : . : . : . : . :
rJMSF026P02- CC
JMSF053M13+ CCGGATCCTTCC
JMSF046C23+ CCGGATCC
JMSF026P02+ CCGGATCCTTCCTTCACACGTACAGGTAAGAAATCATTATCTCAAATTCATATATAGATC
____________________________________________________________
consensus CCGGATCCTTCCTTCACACGTACAGGTAAGAAATCATTATCTCAAATTCATATATAGATC
. : . : . : . : . : . :
JMSF026P02+ AAGTGATTAAGTGGATAAGTACCCATTCAACCCTCTCGGAGCATCGAATTGTGGTACGGA
____________________________________________________________
consensus AAGTGATTAAGTGGATAAGTACCCATTCAACCCTCTCGGAGCATCGAATTGTGGTACGGA
. : . : . : . : . : . :
JMSF026P02+ AGTTGGTGTAGCGTTTCGGTAGCGTAGTGCGGCGGAAGTTAGCGGCGGTGGCGAGGCTGA
____________________________________________________________
consensus AGTTGGTGTAGCGTTTCGGTAGCGTAGTGCGGCGGAAGTTAGCGGCGGTGGCGAGGCTGA
. : . : . : . : . : . :
JMSF026P02+ AGTTGAGCGATGCGGCCATTAATGAAGAAGNTAAGTTTCAGTCTGGTTTTGAAAGGTGGT
____________________________________________________________
consensus AGTTGAGCGATGCGGCCATTAATGAAGAAGNTAAGTTTCAGTCTGGTTTTGAAAGGTGGT
. : . : . : . : . : . :
JMSF026P02+ TATTCAGTCCCGGGGGACGTTATCCGTTTGAAATGCGCACCAAAATCAAACGTCACTCGC
____________________________________________________________
consensus TATTCAGTCCCGGGGGACGTTATCCGTTTGAAATGCGCACCAAAATCAAACGTCACTCGC