Contig 009363:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025O24Sequence511009363 (3)emb|CDP03576.1|2e-36unnamed protein product [Coffea canephora]
JMFF033P06Sequence218009363 (3)786014881ref|XP_008234954.1|1e-64PREDICTED: gibberellin receptor GID1B-like [Prunus mume] ref|XP_008234955.1| PRE
JMSF026M07Sequence219009363 (3)

Alignment

This contig is upended


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JMFF025O24+                                       TCGGGGGCAGGTTTGTATATCCTGTTAAGGAT
                      ____________________________________________________________
consensus                                         TCGGGGGCAGGTTTGTATATCCTGTTAAGGAT
 
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JMFF025O24+           ATTGGTGGCCCCATCCAGAACATCAAAAGAGTAAACCCCATCAACTGGAATGGTATTTGC
                      ____________________________________________________________
consensus             ATTGGTGGCCCCATCCAGAACATCAAAAGAGTAAACCCCATCAACTGGAATGGTATTTGC
 
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JMFF025O24+           CATGGCTTTCCTGTCAAGAAACTCAGCCAACTCNCGGTTGAATGTGCCATCAGGCTTCCT
                      ____________________________________________________________
consensus             CATGGCTTTCCTGTCAAGAAACTCAGCCAACTCNCGGTTGAATGTGCCATCAGGCTTCCT
 
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JMFF025O24+           GAGCAGATTGTAAGCCCCCTTGAAATTTGATATGAGAATCCAGGTGTTGAGNGGAACCNC
                      ____________________________________________________________
consensus             GAGCAGATTGTAAGCCCCCTTGAAATTTGATATGAGAATCCAGGTGTTGAGNGGAACCNC
 
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JMFF025O24+           NCTNTTGGATTCCCTAGCGTTGATTTCGNTACTGCCTGCCATGACTGTNTGTTTTNTCCG
                      ____________________________________________________________
consensus             NCTNTTGGATTCCCTAGCGTTGATTTCGNTACTGCCTGCCATGACTGTNTGTTTTNTCCG
 
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JMFF025O24+           AAAGCTTTAAAGAAGGAATCTTTTTTTTTTTCTTTTCTTGTTTTTCTGTAGGGGAAGCTT
JMFF033P06+                                TTTTTTTTTTCTTTTCTTGTTTTTCTGTAGGGGAAGCTT
JMSF026M07+                                TTTTTTTTTTCTTTTCTTGTTTTTCTGTAGGGGAAGCTT
                      ____________________________________________________________
consensus             AAAGCTTTAAAGAAGGAATCTTTTTTTTTTTCTTTTCTTGTTTTTCTGTAGGGGAAGCTT
 
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JMFF025O24+           TAGATGGGGGCACTGATCTTGAAAAAGAGAAGCGTTTGATTATTCATAACGATTCAGAGA
JMFF033P06+           TAGATGGGGGCACTGATCTTGAAAAAGAGAAGCGTTTGATTATTCATAACGATTCAGAGA
JMSF026M07+           TAGATGGGGGCACTGATCTTGAAAAAGAGAAGCGTTTGATTATTCATAACGATTCAGAGA
                      ____________________________________________________________
consensus             TAGATGGGGGCACTGATCTTGAAAAAGAGAAGCGTTTGATTATTCATAACGATTCAGAGA
 
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JMFF025O24+           CAAAGCTTTGACTGCGGGTGAGAGCGATAGTGTGAACTCTTGCGTTGTTTATGAACAAAG
JMFF033P06+           CAAAGCTTTGACTGCGGGTGAGAGCGATAGTGTGAACTCTTGCGTTGTTTATGAACAAAG
JMSF026M07+           CAAAGCTTTGACTGCGGGTGAGAGCGATAGTGTGAACTCTTGCGTTGTTTATGAACAAAG
                      ____________________________________________________________
consensus             CAAAGCTTTGACTGCGGGTGAGAGCGATAGTGTGAACTCTTGCGTTGTTTATGAACAAAG
 
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JMFF025O24+           CCGCAGAGTTCCCAGAACAGACCAGAGCTCAAATGACAAAAGGCTTATGGTGAAGAACT 
JMFF033P06+           CCGCAGAGTTCCCAGAACAGACCAGAGCTCAAATGACAAAAGGCTTATGGTGAAGAACT 
JMSF026M07+           CCGCAGAGTTCCCAGAACAGACCAGAGCTCAAATGACAAAAGGCTTATGGTGAAGAACTC
                      ____________________________________________________________
consensus             CCGCAGAGTTCCCAGAACAGACCAGAGCTCAAATGACAAAAGGCTTATGGTGAAGAACTC