Contig 009362:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007N10Sequence267024098759009362 (5)ref|XP_011073395.1|299PREDICTED: uncharacterized protein LOC105158360 [Sesamum indicum]
JMSF011A03Sequence266009362 (5)ref|XP_009592214.1|147PREDICTED: uncharacterized protein LOC104089100 [Nicotiana tomentosiformis]466009362 (5)ref|XP_009592214.1|147PREDICTED: uncharacterized protein LOC104089100 [Nicotiana tomentosiformis]
JMSF026L23Sequence516009362 (5)ref|XP_009592214.1|147PREDICTED: uncharacterized protein LOC104089100 [Nicotiana tomentosiformis]466009362 (5)ref|XP_009592214.1|147PREDICTED: uncharacterized protein LOC104089100 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF007N10+                 CCAAGCAAAATATCAAAGCTTGCGATTCTGAACAGTCCGTTAACACCTTCATC
                      ____________________________________________________________
consensus                    CCAAGCAAAATATCAAAGCTTGCGATTCTGAACAGTCCGTTAACACCTTCATC
 
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rJMSF007N10+          TCCCGTTCCTGGACTCTTTCAACAGCTCAGAATTCCATTCCTTGGCGAATTTACTTGCCA
                      ____________________________________________________________
consensus             TCCCGTTCCTGGACTCTTTCAACAGCTCAGAATTCCATTCCTTGGCGAATTTACTTGCCA
 
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rJMSF007N10+          GAATGCAGTAATGGCTGAGCGCTTCATCGAAGCAGGTAGCGCTTATGTCCTAAAACTGGA
                      ____________________________________________________________
consensus             GAATGCAGTAATGGCTGAGCGCTTCATCGAAGCAGGTAGCGCTTATGTCCTAAAACTGGA
 
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rJMSF007N10+          GAAGGCTGATGTATACAGGTTACCATATTTGTCAAGCAGTGGTCCGGGTTTTGCTCTGCT
                      ____________________________________________________________
consensus             GAAGGCTGATGTATACAGGTTACCATATTTGTCAAGCAGTGGTCCGGGTTTTGCTCTGCT
 
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rJMSF026L23+                                  AAAGGACATCCAGAGCCAGATATCATCTGGCTTTGC
JMSF011A03-                                   AAAGGACATCCAGAGCCAGATATCATCTGGCTTTGC
rJMSF011A03+                                  AAAGGACATCCAGAGCCAGATATCATCTGGCTTTGC
rJMSF007N10+          TGATTCGGCAAAGAGAGCTAATTTCAAGGACATCCAGAGCCAGATATCATCTGGCTTTGC
JMSF026L23-                                   AAAGGACATCCAGAGCCAGATATCATCTGGCTTTGC
                      ____________________________________________________________
consensus             TGATTCGGCAAAGAGAGCTAATTTAAAGGACATCCAGAGCCAGATATCATCTGGCTTTGC
 
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rJMSF026L23+          CTCTGGAAGTTGGGATAAGCCAATTCTAGTGGCATGGGGAATATCAGATAAGTATCTTCC
JMSF011A03-           CTCTGGAAGTTGGGATAAGCCAATTCTAGTGGCATGGGGAATATCAGATAAGTATCTTCC
rJMSF011A03+          CTCTGGAAGTTGGGATAAGCCAATTCTAGTGGCATGGGGAATATCAGATAAGTATCTTCC
rJMSF007N10+          CTCTGGAAGTTGGGATAAGCCAATTCTAGTGGCATGGGGAATATCAGATAAGTATCTTCC
JMSF026L23-           CTCTGGAAGTTGGGATAAGCCAATTCTAGTGGCATGGGGAATATCAGATAAGTATCTTCC
                      ____________________________________________________________
consensus             CTCTGGAAGTTGGGATAAGCCAATTCTAGTGGCATGGGGAATATCAGATAAGTATCTTCC
 
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rJMSF026L23+          ACAATCAGTGGCTGAAGAGTTTCAAAAGGGAAACCCTGACTCAGTTAAGCTTAAACTGAT
JMSF011A03-           ACAATCAGTGGCTGAAGAGTTTCAAAAGGGAAACCCTGACTCAGTTAAGCTTAAACTGAT
rJMSF011A03+          ACAATCAGTGGCTGAAGAGTTTCAAAAGGGAAACCCTGACTCAGTTAAGCTTAAACTGAT
rJMSF007N10+          ACAATCAGTGGCTGAAGAGTTTCAAAAGGGAAACCCTGACTCAGTTAAGCTTAAACTGAT
JMSF026L23-           ACAATCAGTGGCTGAAGAGTTTCAAAAGGGAAACCCTGACTCAGTTAAGCTTAAACTGAT
                      ____________________________________________________________
consensus             ACAATCAGTGGCTGAAGAGTTTCAAAAGGGAAACCCTGACTCAGTTAAGCTTAAACTGAT
 
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rJMSF026L23+          TGAAGGTGCAGGCCACATGCCGCAAGAAGACTGGCCCGAAAAAGTAGTTGATGCCTTGAG
JMSF011A03-           TGAAGGTGCAGGCCACATGCCGCAAGAAGACTGGCCCGAAAAAGTAGTTGATGCCTTGAG
rJMSF011A03+          TGAAGGTGCAGGCCACATGCCGCAAGAAGACTGGCCCGAAAAAGTAGTTGATGCCTTGAG
rJMSF007N10+          TGAAGGTGCAGGCCACATGCCGCAAGAAGACTGGCCCGAAAAAGTAGTTGGTGCCTTGAG
JMSF026L23-           TGAAGGTGCAGGCCACATGCCGCAAGAAGACTGGCCCGAAAAAGTAGTTGATGCCTTGAG
                      ____________________________________________________________
consensus             TGAAGGTGCAGGCCACATGCCGCAAGAAGACTGGCCCGAAAAAGTAGTTGATGCCTTGAG
 
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rJMSF026L23+          AGTCTTTTTATGATCTTGGCATATGGTTTCCCAGCATGAATTCTCATACCAATTTCAAGT
JMSF011A03-           AGTCTTTTTATGATCTTGGCATATGGTTTCCCAGCATGAATTCTCATACC          
rJMSF011A03+          AGTCTTTTTATGATCTTGGCATATGGTTTCCCAGCATGAATTCTCATACCAATTTCAAGT
rJMSF007N10+          AGTCTTTTTATGATCTTGGCATATGGTTTCCCAGCATGAATTCTCATACCAATTTCAAGT
JMSF026L23-           AGTCTTTTTATGATCTTGGCATATGGTTTCCCAGCATGAATTCTCATACCAATTTCAAGT
                      ____________________________________________________________
consensus             AGTCTTTTTATGATCTTGGCATATGGTTTCCCAGCATGAATTCTCATACCAATTTCAAGT
 
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rJMSF026L23+          GTTTGTTCCATGTGAAGAATTATATATGCATTATTGGTAAGTTAAACATCACTGTTTGAT
rJMSF011A03+          GTTTGTTCCATGTGAAGAATTATATATGCATTATTGGTAAGTTAAACATCACTGTTTGAT
rJMSF007N10+          GTTTGTTCCATGTGAAGAATTATATATGCATTATTGGTAAGTTAAACATCACTGTTTGAT
JMSF026L23-           GTTTGTTCCATGTGAAGAATTATATATGCATTATTGGTAAGTTAAACATCACTGTTTGAT
                      ____________________________________________________________
consensus             GTTTGTTCCATGTGAAGAATTATATATGCATTATTGGTAAGTTAAACATCACTGTTTGAT
 
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rJMSF026L23+          AAAATACATACTCAGCTTGTACATCCTTACCAGAAAAAATCTCAGTTTCATGTGAGTATT
rJMSF011A03+          AAAATACATACTCAGCTTGTACATCCTTACCAGAAAAAATCTCAGTTTCATGTGAGTATT
rJMSF007N10+          AAAATACATACTCAGCTTGTACATCCTTACCAGAAAAAATCTCAGTTTCATGTGAGTATT
JMSF026L23-           AAAATACATACTCAGCTTGTACATCCTTACCAGAAAAAATCTCAGTTTCATGTGAGTATT
                      ____________________________________________________________
consensus             AAAATACATACTCAGCTTGTACATCCTTACCAGAAAAAATCTCAGTTTCATGTGAGTATT
 
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rJMSF026L23+          GTAAAATATTGCCAACTACTGCAGAAATGTTAGTTTCTAGTTTCAACAGAATGCAGAAAG
rJMSF011A03+          GTAAAATATTGCCAACTACTGCAGAAATGTTAGTTTCTAGTTTCAACAGAATGCAGAAAG
rJMSF007N10+          GTAAAATATTGCCAACTACTGCAGAAATGTTAGTTTCTAGTTTCAACAGAATGCAGAAAG
JMSF026L23-           GTAAAATATTGCCAACTACTGCAGAAATGTTAGTTTCTAGTTTCAACAGAATGCAGAAAG
                      ____________________________________________________________
consensus             GTAAAATATTGCCAACTACTGCAGAAATGTTAGTTTCTAGTTTCAACAGAATGCAGAAAG
 
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rJMSF026L23+          TTTTGGCCTT                                                  
rJMSF011A03+          TTTTGGCCTT                                                  
rJMSF007N10+          TTTTGGCCTTTATGTCCCTAAACATGCTGAGATATGCAAGTTATTT              
JMSF026L23-           TTTTGGCCTTTATGTGCCTAAACATGCTGAGATATGCAAGTTATTTTAACAAANAAAAAA
                      ____________________________________________________________
consensus             TTTTGGCCTTTATGTGCCTAAACATGCTGAGATATGCAAGTTATTTTAACAAANAAAAAA