Contig 009361:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF025K17Sequence678009361 (2)ref|XP_006359315.1|108PREDICTED: uncharacterized protein LOC102599098 [Solanum tuberosum]730024582ref|XP_010319818.1|207PREDICTED: uncharacterized protein LOC101262104 [Solanum lycopersicum]
JMSF026K17Sequence530009361 (2)ref|XP_011101637.1|7e-21PREDICTED: uncharacterized protein LOC105179671 isoform X3 [Sesamum indicum]

Alignment

This contig is upended


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JMSF025K17+                                                     CCTCCAAATTCAACTTTT
                      ____________________________________________________________
consensus                                                       CCTCCAAATTCAACTTTT
 
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JMSF025K17+           TGGGCTGAGCTTGAGTATCGATGGTAACAATTGCTTGTGCATCACAAGATTGATCTAAGG
                      ____________________________________________________________
consensus             TGGGCTGAGCTTGAGTATCGATGGTAACAATTGCTTGTGCATCACAAGATTGATCTAAGG
 
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JMSF025K17+           AACTACTTACTCGCCCATGTACTTTCCCATCATTGGTTTTCTCAGAATTGTGGACAATAA
                      ____________________________________________________________
consensus             AACTACTTACTCGCCCATGTACTTTCCCATCATTGGTTTTCTCAGAATTGTGGACAATAA
 
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JMSF025K17+           GTTGGTTTGGCACCTTAGCCTTGCAGTCATCACAAACCCATCTCACAAATTCATCTAAAG
JMSF026K17+                     CACCTTAGCCTTGCAGTCATCACAAACCCATCTCACAAATTCATCTAAAG
                      ____________________________________________________________
consensus             GTTGGTTTGGCACCTTAGCCTTGCAGTCATCACAAACCCATCTCACAAATTCATCTAAAG
 
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JMSF025K17+           TATCTGGAATATCATCTAGGCAGTACCGATGCACAGCAAATTCCAGACACTCGACACAGA
JMSF026K17+           TATCTGGAATATCATCTAGGCAGTACCGATGCACAGCAAATTCCAGACACTCGACACAGA
                      ____________________________________________________________
consensus             TATCTGGAATATCATCTAGGCAGTACCGATGCACAGCAAATTCCAGACACTCGACACAGA
 
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JMSF025K17+           AAACTAAAGCATTAGTGTATCCCCGGTCACCACATTGCAGGCATATAGTCACATTTGCAG
JMSF026K17+           AAANTAAAGCATTAGTGTATCCCCGGTCACCACATTGCAGGCATATAGTCACATTTGCAG
                      ____________________________________________________________
consensus             AAACTAAAGCATTAGTGTATCCCCGGTCACCACATTGCAGGCATATAGTCACATTTGCAG
 
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JMSF025K17+           GAGGAATATTAGGGGAACTAACCATGGCTGTGAAGAAGAGTACGAACAAAAATAAATAAA
JMSF026K17+           GAGGAATATTAGGGGAACTAACCATGGCTGTGAAGAAGAGTACGAACAAAAATAAATAAA
                      ____________________________________________________________
consensus             GAGGAATATTAGGGGAACTAACCATGGCTGTGAAGAAGAGTACGAACAAAAATAAATAAA
 
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JMSF025K17+           ATTGATGCAACCCACACCGCGAAGTCACGAACAATGCTGGAGCACCGTCTACCGTAGAGT
JMSF026K17+           ATTGATGCAACCCACACCGCGAAGTCACGAACAATGCTGGAGCACCGTCTACCGTAGAGT
                      ____________________________________________________________
consensus             ATTGATGCAACCCACACCGCGAAGTCACGAACAATGCTGGAGCACCGTCTACCGTAGAGT
 
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JMSF025K17+           TTACAAATTTTAATTGAAAATTAAGACGTTTTTAGGCAGACAGTGATTGTGAAAGATTTA
JMSF026K17+           TTACAAATTTTAATTGAAAATTAAGACGTTTTTAGGCAGACAGTGATTGTGAAAGATTTA
                      ____________________________________________________________
consensus             TTACAAATTTTAATTGAAAATTAAGACGTTTTTAGGCAGACAGTGATTGTGAAAGATTTA
 
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JMSF025K17+           TAAAAAAACAACTATTACCGAATTTCCTTTTCGGTCTCAAACCCTAATTGGCCATCAATC
JMSF026K17+           TAAAAAAACAACTATTACCGAATTTCCTTTTCGGTCTCAAACCCTAATTGGCCATCAATN
                      ____________________________________________________________
consensus             TAAAAAAACAACTATTACCGAATTTCCTTTTCGGTCTCAAACCCTAATTGGCCATCAATC
 
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JMSF025K17+           TATTATCTGTGTTTTTGAAAAAACTACTATTGCCGGATTTCATATTCCTTTACCCTTTTT
JMSF026K17+           TATTATNTGTGTTTTTGAAAAAACTACTATTGCCGGATTTCATATTCCTTTACCCTTTTT
                      ____________________________________________________________
consensus             TATTATCTGTGTTTTTGAAAAAACTACTATTGCCGGATTTCATATTCCTTTACCCTTTTT
 
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JMSF025K17+           CCCTCTAAAACCCTAAAAATGCAGTTTAATCCTATCCAGTGTAGAAGACGGACACGCCTC
JMSF026K17+           CCCTCTAAAACCNTAAAAATGCAGTTTAATCCTATCCAGTGTAGAAGACGGACACGCCTC
                      ____________________________________________________________
consensus             CCCTCTAAAACCCTAAAAATGCAGTTTAATCCTATCCAGTGTAGAAGACGGACACGCCTC