Contig 009356:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026B05Sequence669009356 (2)ref|XP_009618680.1|3e-89PREDICTED: protein EI24 homolog isoform X1 [Nicotiana tomentosiformis]785007518 (7)ref|XP_009395645.1|5e-87PREDICTED: 60S ribosomal protein L10a-1-like [Musa acuminata subsp. malaccensis
JMSF036I20Sequence712009356 (2)ref|XP_009798552.1|5e-111PREDICTED: protein EI24 homolog isoform X1 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF036I20+ TATGCATACATCCAAGAAAGAAGCAGAAAGTTAAGCGCCTTTCCAATAT
                      ____________________________________________________________
consensus TATGCATACATCCAAGAAAGAAGCAGAAAGTTAAGCGCCTTTCCAATAT
 
. : . : . : . : . : . :
JMSF036I20+ AGGGGATAAATCCAATAACATAAACCTCCAGGAAAAAGAAAGTCAGCAAAAGGACAGAAT
JMSF026B05+ GGACAGAAT
                      ____________________________________________________________
consensus AGGGGATAAATCCAATAACATAAACCTCCAGGAAAAAGAAAGTCAGCAAAAGGACAGAAT
 
. : . : . : . : . : . :
JMSF036I20+ AGATTTGTTCCGCAATGCCAATCATGACTCCTTCAAAATCGGTTGATTTAGCCTTACTAA
JMSF026B05+ AGATTTGTTCCGCAATGCCAATCATGACTCCTTCAAAATCGGTTGATTTAGCCTTACTAA
                      ____________________________________________________________
consensus AGATTTGTTCCGCAATGCCAATCATGACTCCTTCAAAATCGGTTGATTTAGCCTTACTAA
 
. : . : . : . : . : . :
JMSF036I20+ CTGTTTTTTGTGAAGTTTGCGACTCCTTCTGATCAGTCAATTTAGTACCAGAAGCTCCAT
JMSF026B05+ CTGTTTTTTGTGAAGTTTGCGACTCCTTCTGATCAGTCAATTTAGTACCAGAAGCTCCAT
                      ____________________________________________________________
consensus CTGTTTTTTGTGAAGTTTGCGACTCCTTCTGATCAGTCAATTTAGTACCAGAAGCTCCAT
 
. : . : . : . : . : . :
JMSF036I20+ ATTCCTCAATTGCAAAAAACCCATGTTTTGCAATGTCATTGTACCAGATATTGCTAAGAA
JMSF026B05+ ATTCCTCAATTGCAAAAAACCCATGTTTTGCAATGTCATTGTACCAGATATTGCTAAGAA
                      ____________________________________________________________
consensus ATTCCTCAATTGCAAAAAACCCATGTTTTGCAATGTCATTGTACCAGATATTGCTAAGAA
 
. : . : . : . : . : . :
JMSF036I20+ TGAAGCTCAATATGTATAATGGAAAAAACCAGAAAACATAGAATAGCTGTACAAGTCCAA
JMSF026B05+ TGAAGCTCAATATGTATAATGGAAAAAACCAGAAAACATAGAATAGCTGTACAAGTCCAA
                      ____________________________________________________________
consensus TGAAGCTCAATATGTATAATGGAAAAAACCAGAAAACATAGAATAGCTGTACAAGTCCAA
 
. : . : . : . : . : . :
JMSF036I20+ GACGTAAGAAATTATAGAATTCCAAAATACCCCCACATGAGCGTGAATCTTCAGAAGTGA
JMSF026B05+ GACGTAAGAAATTATAGAATTCCAAAATACCCCCACATGAGCGTGAATCTTCAGAAGTGA
                      ____________________________________________________________
consensus GACGTAAGAAATTATAGAATTCCAAAATACCCCCACATGAGCGTGAATCTTCAGAAGTGA
 
. : . : . : . : . : . :
JMSF036I20+ TCTGTGGGCATTGATCAGGTAATATCCATTGTAGTGCTGGAACAATGACTGATTTCAGAA
JMSF026B05+ TCTGTGGGCATTGATCAGGTAATATCCATTGTAGTGCTGGAACAATGACTGATTTCAGAA
                      ____________________________________________________________
consensus TCTGTGGGCATTGATCAGGTAATATCCATTGTAGTGCTGGAACAATGACTGATTTCAGAA
 
. : . : . : . : . : . :
JMSF036I20+ GAAAGATACTCCCTAAGAAGATAAAGCCATTCAATAAGAAACACTGGCCAGTGCGGACGG
JMSF026B05+ GAAAGATACTCCCTAAGAAGATAAAGCCATTCAATAAGAAACACTGGCCAGTGCGGACGG
                      ____________________________________________________________
consensus GAAAGATACTCCCTAAGAAGATAAAGCCATTCAATAAGAAACACTGGCCAGTGCGGACGG
 
. : . : . : . : . : . :
JMSF036I20+ CGAGCTGTCTCGACCTGAAACAGTAGATGAAGACGCGATGAAGACAGCAAGCCTCCCTGA
JMSF026B05+ CGAGCTGTCTCGACCTGAAACAGTAGATGAAGACGCGATGAAGACAGCAAGCCTCCCTGA
                      ____________________________________________________________
consensus CGAGCTGTCTCGACCTGAAACAGTAGATGAAGACGCGATGAAGACAGCAAGCCTCCCTGA
 
. : . : . : . : . : . :
JMSF036I20+ AACCCTCCGCCCAAAGCACTAACCCCTGCTTTGACTTCCTTATTAGAGAGCCCGCCAAAT
JMSF026B05+ AACCCTCCGCCCAAAGCACTAACCCCTGCTTTGACTTCCTTATTAGAGAGCCCGCCAAAT
                      ____________________________________________________________
consensus AACCCTCCGCCCAAAGCACTAACCCCTGCTTTGACTTCCTTATTAGAGAGCCCGCCAAAT
 
. : . : . : . : . : . :
JMSF036I20+ CCGCCGGAACGCTGACGCTGCTCTCCATCGCTGAAGAAGACGATGAACCGCCCAATCCGA
JMSF026B05+ CCGCCGGAACGCTGACGCTGCTCTCCATCGCTGAAGAAGACGATGAACCGCCCAATCCGA
                      ____________________________________________________________
consensus CCGCCGGAACGCTGACGCTGCTCTCCATCGCTGAAGAAGACGATGAACCGCCCAATCCGA
 
. : . : . : . : . : . :
JMSF036I20+ TC
JMSF026B05+ TCGGAAGATGTTGATTGCTTCGCTTTTCAATGAAAAAAACAAAAGTTGCACGCAAACCTC
                      ____________________________________________________________
consensus TCGGAAGATGTTGATTGCTTCGCTTTTCAATGAAAAAAACAAAAGTTGCACGCAAACCTC