Contig 009354:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS128D09Sequence621009354 (2)
JMSF025P20Sequence624009354 (2)ref|XP_002313432.2|2e-14telomere-binding family protein [Populus trichocarpa] gb|EEE87387.2| telomere-bi740013109 (2)emb|CDP09072.1|3e-74unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS128D09+ CCAAAAGCATCTGCATAAAAATGCATAAAATT
                      ____________________________________________________________
consensus CCAAAAGCATCTGCATAAAAATGCATAAAATT
 
. : . : . : . : . : . :
JMFS128D09+ CAATTCTTCTAATCCATAATGCGGATCGACTTACCCTCGCTGATCTGGTAGCTCGTGGTA
JMSF025P20+ CCTCGCTGATCTGGTAGCTCGTGGTA
                      ____________________________________________________________
consensus CAATTCTTCTAATCCATAATGCGGATCGACTTACCCTCGCTGATCTGGTAGCTCGTGGTA
 
. : . : . : . : . : . :
JMFS128D09+ TTGGTGGCACCTGATAGCCATTAAATCCGTAATCCAATCTCTTTTGCAACACCATATCTC
JMSF025P20+ TTGGTGGCACCTGATAGCCATTAAATCCGTAATCCAATCTCTTTTGCAACACCATATCTC
                      ____________________________________________________________
consensus TTGGTGGCACCTGATAGCCATTAAATCCGTAATCCAATCTCTTTTGCAACACCATATCTC
 
. : . : . : . : . : . :
JMFS128D09+ AAAGGCATGCCAAGAACTCAAAACACACAGAACACTATCATTATTTTTATTTTTTTTTGT
JMSF025P20+ AAAGGCATGCCAAGAACTCAAAACACACAGAACACTATCATTATTTTTATTTTTTTTTGT
                      ____________________________________________________________
consensus AAAGGCATGCCAAGAACTCAAAACACACAGAACACTATCATTATTTTTATTTTTTTTTGT
 
. : . : . : . : . : . :
JMFS128D09+ TTTTTAAATCAAATTTACTGCCACAGATTCACTAATCATCTTCCAAAAGCCCAAAGGACA
JMSF025P20+ TTTTTAAATCAAATTTACTGCCACAGATTCACTAATCATCTTCCAAAAGCCCAAAGGACA
                      ____________________________________________________________
consensus TTTTTAAATCAAATTTACTGCCACAGATTCACTAATCATCTTCCAAAAGCCCAAAGGACA
 
. : . : . : . : . : . :
JMFS128D09+ AAGAAACCCTGCATTCTGCAAGCAACCGACTTTTCGTCAAAATTCATGAGAATTCTCCCT
JMSF025P20+ AAGAAACCCTGCATTCTGCAAGCAACCGACTTTTCGTCAAAATTCATGAGAATTCTCCCT
                      ____________________________________________________________
consensus AAGAAACCCTGCATTCTGCAAGCAACCGACTTTTCGTCAAAATTCATGAGAATTCTCCCT
 
. : . : . : . : . : . :
JMFS128D09+ AAAAACCCATGCTTTGAAGAAGCAAAGCAAAAGCTTACACAATTGAACACCAACAATGCA
JMSF025P20+ AAAAACCCATGCTTTGAAGAAGCAAAGCAAAAGCTTACACAATTGAACACCAACAATGCA
                      ____________________________________________________________
consensus AAAAACCCATGCTTTGAAGAAGCAAAGCAAAAGCTTACACAATTGAACACCAACAATGCA
 
. : . : . : . : . : . :
JMFS128D09+ AGATCGGAAGTGGGCGGAAAATTTGAAACTCAGAAATCTAATAATCTAGGAAAGAAAAAA
JMSF025P20+ AGATCGGAAGTGGGCGGAAAATTTGAAACTCAGAAATCTAATAATCTAGGAAAGAAAAAA
                      ____________________________________________________________
consensus AGATCGGAAGTGGGCGGAAAATTTGAAACTCAGAAATCTAATAATCTAGGAAAGAAAAAA
 
. : . : . : . : . : . :
JMFS128D09+ CAAAAACCCAGACAGAGTTTTCGTGGATCACGTAAACAGAAACAGCCCCTATCCTATCCC
JMSF025P20+ CAAAAACCCAGACAGAGTTTTCGTGGATCACGTAAACAGAAACAGCCCCTATCCTATCCC
                      ____________________________________________________________
consensus CAAAAACCCAGACAGAGTTTTCGTGGATCACGTAAACAGAAACAGCCCCTATCCTATCCC
 
. : . : . : . : . : . :
JMFS128D09+ ATGGTTTTCTCGCTCTGCCTTCCTCAAGACCCAAACATTTTCCGACACGCAACCGTAGTT
JMSF025P20+ ATGGTTTTCTCGCTCTGCCTTCCTCAAGACCCAAACATTTTCCGACACGCAACCGTAGTT
                      ____________________________________________________________
consensus ATGGTTTTCTCGCTCTGCCTTCCTCAAGACCCAAACATTTTCCGACACGCAACCGTAGTT
 
. : . : . : . : . : . :
JMFS128D09+ TTATAGTTTTTTTTCTTTCTCCTTCTCTCTGCAAAAACCCTCTGAAAAC
JMSF025P20+ TTATAG-TTTTTTTCTTTCTCCTTCTCTCTGCAAAAACCCTCTGAAAACCATCCTATCTC
                      ____________________________________________________________
consensus TTATAGTTTTTTTTCTTTCTCCTTCTCTCTGCAAAAACCCTCTGAAAACCATCCTATCTC