Contig 009354:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS128D09+                                       CCAAAAGCATCTGCATAAAAATGCATAAAATT
                      ____________________________________________________________
consensus                                         CCAAAAGCATCTGCATAAAAATGCATAAAATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS128D09+           CAATTCTTCTAATCCATAATGCGGATCGACTTACCCTCGCTGATCTGGTAGCTCGTGGTA
JMSF025P20+                                             CCTCGCTGATCTGGTAGCTCGTGGTA
                      ____________________________________________________________
consensus             CAATTCTTCTAATCCATAATGCGGATCGACTTACCCTCGCTGATCTGGTAGCTCGTGGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS128D09+           TTGGTGGCACCTGATAGCCATTAAATCCGTAATCCAATCTCTTTTGCAACACCATATCTC
JMSF025P20+           TTGGTGGCACCTGATAGCCATTAAATCCGTAATCCAATCTCTTTTGCAACACCATATCTC
                      ____________________________________________________________
consensus             TTGGTGGCACCTGATAGCCATTAAATCCGTAATCCAATCTCTTTTGCAACACCATATCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS128D09+           AAAGGCATGCCAAGAACTCAAAACACACAGAACACTATCATTATTTTTATTTTTTTTTGT
JMSF025P20+           AAAGGCATGCCAAGAACTCAAAACACACAGAACACTATCATTATTTTTATTTTTTTTTGT
                      ____________________________________________________________
consensus             AAAGGCATGCCAAGAACTCAAAACACACAGAACACTATCATTATTTTTATTTTTTTTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS128D09+           TTTTTAAATCAAATTTACTGCCACAGATTCACTAATCATCTTCCAAAAGCCCAAAGGACA
JMSF025P20+           TTTTTAAATCAAATTTACTGCCACAGATTCACTAATCATCTTCCAAAAGCCCAAAGGACA
                      ____________________________________________________________
consensus             TTTTTAAATCAAATTTACTGCCACAGATTCACTAATCATCTTCCAAAAGCCCAAAGGACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS128D09+           AAGAAACCCTGCATTCTGCAAGCAACCGACTTTTCGTCAAAATTCATGAGAATTCTCCCT
JMSF025P20+           AAGAAACCCTGCATTCTGCAAGCAACCGACTTTTCGTCAAAATTCATGAGAATTCTCCCT
                      ____________________________________________________________
consensus             AAGAAACCCTGCATTCTGCAAGCAACCGACTTTTCGTCAAAATTCATGAGAATTCTCCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS128D09+           AAAAACCCATGCTTTGAAGAAGCAAAGCAAAAGCTTACACAATTGAACACCAACAATGCA
JMSF025P20+           AAAAACCCATGCTTTGAAGAAGCAAAGCAAAAGCTTACACAATTGAACACCAACAATGCA
                      ____________________________________________________________
consensus             AAAAACCCATGCTTTGAAGAAGCAAAGCAAAAGCTTACACAATTGAACACCAACAATGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS128D09+           AGATCGGAAGTGGGCGGAAAATTTGAAACTCAGAAATCTAATAATCTAGGAAAGAAAAAA
JMSF025P20+           AGATCGGAAGTGGGCGGAAAATTTGAAACTCAGAAATCTAATAATCTAGGAAAGAAAAAA
                      ____________________________________________________________
consensus             AGATCGGAAGTGGGCGGAAAATTTGAAACTCAGAAATCTAATAATCTAGGAAAGAAAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS128D09+           CAAAAACCCAGACAGAGTTTTCGTGGATCACGTAAACAGAAACAGCCCCTATCCTATCCC
JMSF025P20+           CAAAAACCCAGACAGAGTTTTCGTGGATCACGTAAACAGAAACAGCCCCTATCCTATCCC
                      ____________________________________________________________
consensus             CAAAAACCCAGACAGAGTTTTCGTGGATCACGTAAACAGAAACAGCCCCTATCCTATCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS128D09+           ATGGTTTTCTCGCTCTGCCTTCCTCAAGACCCAAACATTTTCCGACACGCAACCGTAGTT
JMSF025P20+           ATGGTTTTCTCGCTCTGCCTTCCTCAAGACCCAAACATTTTCCGACACGCAACCGTAGTT
                      ____________________________________________________________
consensus             ATGGTTTTCTCGCTCTGCCTTCCTCAAGACCCAAACATTTTCCGACACGCAACCGTAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS128D09+           TTATAGTTTTTTTTCTTTCTCCTTCTCTCTGCAAAAACCCTCTGAAAAC           
JMSF025P20+           TTATAG-TTTTTTTCTTTCTCCTTCTCTCTGCAAAAACCCTCTGAAAACCATCCTATCTC
                      ____________________________________________________________
consensus             TTATAGTTTTTTTTCTTTCTCCTTCTCTCTGCAAAAACCCTCTGAAAACCATCCTATCTC