| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011C13 | Sequence | 161 | 009349 (12) | 691 | 008542 (4) | ref|XP_009619838.1| | 1e-93 | PREDICTED: auxin response factor 4-like [Nicotiana tomentosiformis] | |||
| JMFF050B08 | Sequence | 591 | 009349 (12) | ref|XP_009592534.1| | 1e-44 | PREDICTED: auxin response factor 4-like [Nicotiana tomentosiformis] | 594 | 022406 | ref|XP_009619838.1| | 4e-77 | PREDICTED: auxin response factor 4-like [Nicotiana tomentosiformis] |
| JMFS020H09 | Sequence | 627 | 009349 (12) | ref|XP_006591026.1| | 5e-14 | PREDICTED: auxin response factor 4-like isoform X3 [Glycine max] | |||||
| JMFS021C09 | Sequence | 626 | 009349 (12) | ref|XP_010689575.1| | 7e-09 | PREDICTED: auxin response factor 4 isoform X1 [Beta vulgaris subsp. vulgaris] | |||||
| JMFS023E06 | Sequence | 604 | 009349 (12) | ||||||||
| JMFS078C02 | Sequence | 627 | 009349 (12) | ||||||||
| JMFS092B07 | Sequence | 601 | 009349 (12) | ||||||||
| JMFS097G08 | Sequence | 606 | 009349 (12) | ref|XP_009592534.1| | 4e-40 | PREDICTED: auxin response factor 4-like [Nicotiana tomentosiformis] | |||||
| JMFS111H10 | Sequence | 555 | 009349 (12) | ||||||||
| JMFS123D10 | Sequence | 563 | 009349 (12) | ref|XP_009592534.1| | 3e-112 | PREDICTED: auxin response factor 4-like [Nicotiana tomentosiformis] | |||||
| JMFS124H04 | Sequence | 558 | 009349 (12) | ref|XP_006591026.1| | 3e-16 | PREDICTED: auxin response factor 4-like isoform X3 [Glycine max] | |||||
| JMSF025I18 | Sequence | 530 | 009349 (12) | 756 | 008542 (4) | ref|XP_009619838.1| | 2e-101 | PREDICTED: auxin response factor 4-like [Nicotiana tomentosiformis] | |||
This contig is upended
. : . : . : . : . : . :
JMFS123D10+ TTTGGCTCACAAAAATACTCCATCCGGTGGTGAGCAAATGCCGCCTTGGCTGGCCTC
____________________________________________________________
consensus TTTGGCTCACAAAAATACTCCATCCGGTGGTGAGCAAATGCCGCCTTGGCTGGCCTC
. : . : . : . : . : . :
JMFS123D10+ TATATATGTGTCGAAATTTCCATTCCACTCCATGCAGGTCTCTTGCAAGCAGCTCCTGAA
____________________________________________________________
consensus TATATATGTGTCGAAATTTCCATTCCACTCCATGCAGGTCTCTTGCAAGCAGCTCCTGAA
. : . : . : . : . : . :
JMFS123D10+ ATGGCCTCTGCTCTTTGTAATCCAAAGGTGGGAAACAATCTTCAGCAGCTCTACGAGGAA
____________________________________________________________
consensus ATGGCCTCTGCTCTTTGTAATCCAAAGGTGGGAAACAATCTTCAGCAGCTCTACGAGGAA
. : . : . : . : . : . :
JMFS123D10+ CCGAAAATCCTCCATGGGTACTGGTGTCAGAAGCAGTAAGGGTTTTGCAGAACATATGGG
____________________________________________________________
consensus CCGAAAATCCTCCATGGGTACTGGTGTCAGAAGCAGTAAGGGTTTTGCAGAACATATGGG
. : . : . : . : . : . :
JMFS123D10+ AGGTTGATTTTGTAGGGGCAGTTGCAGTTCCACCCCCCTCCTCATCCATCCCCAAATCCT
____________________________________________________________
consensus AGGTTGATTTTGTAGGGGCAGTTGCAGTTCCACCCCCCTCCTCATCCATCCCCAAATCCT
. : . : . : . : . : . :
JMFS123D10+ CTGCCTCTTTCCCCTCCAAACTCATACCCACTGGCTCTGATATAGGGAGAAGAGTGAGCT
JMFF050B08+ CATACCCACTGGCTCTGATATAGGGAGAAGAGTGAGCT
JMFS097G08+ GTGAGCT
____________________________________________________________
consensus CTGCCTCTTTCCCCTCCAAACTCATACCCACTGGCTCTGATATAGGGAGAAGAGTGAGCT
. : . : . : . : . : . :
JMFS123D10+ GTGTGTAGACATCATCATTTTCCTTATTGGCAAGAAGTTGAACATCCTCTACTCTGCAGA
JMFF050B08+ GTGTGTAGACATCATCATTTTCCTTATTGGCAAGAAGTTGAACATCCTCTACTCTGCAGA
JMFS097G08+ GTGTGTAGACATCATCATTTTCCTTATTGGCAAGAAGTTGAACATCCTCTACTCTGCAGA
____________________________________________________________
consensus GTGTGTAGACATCATCATTTTCCTTATTGGCAAGAAGTTGAACATCCTCTACTCTGCAGA
. : . : . : . : . : . :
JMFS123D10+ AGATCTGGGGCTGAAGGCCAAGTGTTGGGAGGTCAGTCTCCAATGGTGGAAAGGGTGAAG
JMFF050B08+ AGATCTGGGGCTGAAGGCCAAGTGTTGGGAGGTCAGTCTCCAATGGTGGAAAGGGTGAAG
JMFS097G08+ AGATCTGGGGCTGAAGGCCAAGTGTTGGGAGGTCAGTCTCCAATGGTGGAAAGGGTGAAG
____________________________________________________________
consensus AGATCTGGGGCTGAAGGCCAAGTGTTGGGAGGTCAGTCTCCAATGGTGGAAAGGGTGAAG
. : . : . : . : . : . :
JMFS123D10+ CAGAAGCAGCCTGTTCCAAGTGGCCTTGAGGGAAATAGACCACCACATTCCCCTTCTTGG
JMFF050B08+ CAGAAGCAGCCTGTTCCAAGTGGCCTTGAGGGAAATAGACCACCACATTCCCCTTCTTGG
JMFS097G08+ CAGAAGCAGCCTGTTCCAAGTGGCCTTGAGGGAAATAGACCACCACATTCCCCTTCTTGG
JMFS020H09+ CTTGAGGGAAATAGACCACCACATTCCCCTTCTTGG
JMFS124H04+ CCAAGTGGCCTTGAGGGAAATAGACCACCACATTCCCCTTCTTGG
JMFS021C09+ TGAGGGAAATAGACCACCACATTCCCCTTC-TGG
____________________________________________________________
consensus CAGAAGCAGCCTGTTCCAAGTGGCCTTGAGGGAAATAGACCACCACATTCCCCTTCTTGG
. : . : . : . : . : . :
JMFS123D10+ GCAAGCAGGTGAGAGGGCCAGCACAG
JMFF050B08+ GCAAGCAGGTGAGAGGGCCAGCACAGGCATGCCAGAGCTCCAAGTAGATTGAAGATGCAT
JMFS097G08+ GCAAGCAGGTGAGAGGGCCAGCACAGGCATGCCAGAGCTCCAAGTAGATTGAAGATGCAT
JMFS020H09+ GCAAGCAGGTGAGAGGGCCAGCACAGGCATGCCAGAGCTCCAAGTAGATTGAAGATGCAT
JMFS124H04+ GCAAGCAGGTGAGAGGGCCAGCACAGGCATGCCAGAGCTCCAAGTAGATTGAAGATGCAT
JMFS021C09+ GCAAGCAGGTGAGAGGGCCAGCACAGGCATGCCAGAGCTCCAAGTAGATTGAAGATGCAT
JMFS092B07+ GGCCAGCACAGGCATGCCAGAGCTCCAAGTAGATGAAAGATGCAT
JMFS023E06+ AGGCATGCCAGAGCTCCAAGTAGATTGAAGATGCAT
JMFS078C02+ CCAGCACAGGCATGCCAGAGCTCCAAGTAGATTGAAGATGCAT
____________________________________________________________
consensus GCAAGCAGGTGAGAGGGCCAGCACAGGCATGCCAGAGCTCCAAGTAGATTGAAGATGCAT
. : . : . : . : . : . :
JMFF050B08+ TTGAAGAGTTATAAAGGCCCACCCCTTCTTCACATTCTGCATAACACCATGAACCATTCT
JMFS097G08+ TTGAAGAGTTATAAAGGCCCACCCCTTCTTCACATTCTGCATAACACCATGAACCATTCT
JMFS020H09+ TTGAAGAGTTATAAAGGCCCACCCCTTCTTCACATTCTGCATAACACCATGAACCATTCT
JMFS124H04+ TTGAAGAGTTATAAAGGCCCACCCCTTCTTCACATTCTGCATAACACCATGAACCATTCT
JMFS021C09+ TTGAAGAGTTATAAAGGCCCACCCCTTCTTCACATTCTGCATAACACCATGAACCATTCT
JMFS092B07+ TTGAAGAGTTATAAAGGCCCACCCCTTCTTCACATTCTGCATAACACCATGAACCATTCT
JMFS023E06+ TTGAAGAGTTATAAAGGCCCACCCCTTCTTCACATTCTGCATAACACCATGAACCATTCT
JMFS111H10+ AAAGGCCCACCCCTTCTTCACATTATGCATAACACCATGAACCATTGT
JMFS078C02+ TTGAAGAGTTATAAAGGCCCACCCCTTCTTCACATTCTGCATAACACCATGAACCATTCT
____________________________________________________________
consensus TTGAAGAGTTATAAAGGCCCACCCCTTCTTCACATTCTGCATAACACCATGAACCATTCT
. : . : . : . : . : . :
JMFF050B08+ TCTTCTCCTCCTCCTCCTCCTCACCACCCCTCACTTCATGGTTCAGATCAATTTCCATTA
JMFS097G08+ TCTTCTCCTCCTCCTCCTCCTCACCACCCCTCACTTCATGGTTCAGATCAATTTCCATTA
JMFS020H09+ TCTTCTCCTCCTCCTCCTCCTCACCACCCCTCACTTCATGGTTCAGATCAATTTCCATTA
JMFS124H04+ TTTTCTCCTCCTCCTCCTCCTCACCACCCCTCACTTCATGGTTCAGATCAATTTCCATTA
JMFS021C09+ TCTTCTCCTCCTCCTCCTCCTCACCACCCCTCACTTCATGGTTCAGATCAATTTCCATTA
JMFS092B07+ TTTTCTCCTCCTCCTCCTCCTCACCACCCCTCACTTCATGGTTCAGATCAATTTCCATTA
JMFS023E06+ TCTTTTCCTCCTCCTCCTCCTCACCACCCCTCANTTCATGGTTCAGATCAATTTCCATTA
JMFS111H10+ TCTTCTCCTCGTCATCCTCCTCACCACGCCTCACTTCATGGTTCAGATCAATTTCCATTA
JMFS078C02+ TCTTCTCCTCCTCCTCCTCCTCACCACCCCTCACTTCATGGTTCAGATCAATTTCCATTA
JMSF025I18+ CTCCTCCTCCTCACCACCCCTCACTTCATGGTTCAGATCAATTTCCATTA
____________________________________________________________
consensus TCTTCTCCTCCTCCTCCTCCTCACCACCCCTCACTTCATGGTTCAGATCAATTTCCATTA
. : . : . : . : . : . :
JMFF050B08+ ACAATTGAACACCCCCCTAGTGAGGTGCACAGTTTTTCTCTCAATATAGCATCCGAAGCA
JMFF011C13+ TTTTTCTCTCAATATAGCATCCGAAGCA
JMFS097G08+ ACAATTGAACACCCCCCTAGTGAGGTGCACAGTTTTTCTCTCAATATAGCATCCGAAGCA
JMFS020H09+ ACAATTGAACACCCCCCTAGTGAGGTGCACAGTTTTTCTCTCAATATAGCATCCGAAGCA
JMFS124H04+ ACAATTGAACACCCCCCTAGTGAGGTGCACAGTTTTTCTCTCAATATAGCATCCGAAGCA
JMFS021C09+ ACAATTGAACACCCCCCTAGTGAGGTGCACAGTTTTTCTCTCAATATAGCATCCGAAGCA
JMFS092B07+ ACAATTGAACACCCCCCTAGTGAGGTGCACAGTTTTTCTCTCAATATAGCATCCGAAGCA
JMFS023E06+ ACAATTGAACACCCCCCTAGTGAGGTGCACAGTTTTTCTCTCAATATAGCATCCGAAGCA
JMFS111H10+ ACAATTGAACACCCCCCTAGTGAGGTGCACAGTTTTTCTCTCAATATAGCATCCGAAGCA
JMFS078C02+ ACAATTGAACACCCCCCTAGTGAGGTGCACAGTTTTTCTCTCAATATAGCATCCGAAGCA
JMSF025I18+ ACAATTGAACACCCCCCTAGTGAGGTGCACAGTTTTTCCCTCAATATAGCATCCGAAGCA
____________________________________________________________
consensus ACAATTGAACACCCCCCTAGTGAGGTGCACAGTTTTTCTCTCAATATAGCATCCGAAGCA
. : . : . : . : . : . :
JMFF050B08+ TCAACCAACCAATCCACTCAAGAAATAACACCAAAAAGCTTGAGAAACAGTGAAAAACAA
JMFF011C13+ TCAACCAACCAATCCACTCAAGAAATAACACCAAAAAGCTTGAGAAACAGTGAAAAACAA
JMFS097G08+ TCAACCAACCAATCCACTCAAGAAATAACACCAAAAAGCTTGAGAAACAGTGAAAAACAA
JMFS020H09+ TCAACCAACCAATCCACTCAAGAAATAACACCAAAAAGCTTGAGAAACAGTGAAAAACAA
JMFS124H04+ TCAACCAACCAATCCACTCAAGAAATAACACCAAAAAGCTTGAGAAACAGTGAAAAACAA
JMFS021C09+ TCAACCAACCAATCCACTCAAGAAATAACACCAAAAAGCTTGAGAAACAGTGAAAAACAA
JMFS092B07+ TCAACCAACCAATCCACTCAAGAAATAACACCAAAAAGCTTGAGAAACAGTGAAAAACAA
JMFS023E06+ TCAACCAACCAATCCACTCAAGAAATAACACCAAAAAGCTTGAGAAACAGTGAAAAACAA
JMFS111H10+ TCACCCAACCAATCCACTCAAGAAATAACACCAAAAAGCTTGAGAAACAGTGAAAAACAA
JMFS078C02+ TCAACCAACCAATCCACTCAAGAAATAACACCAAAAAGCTTGAGAAACAGTGAAAAACAA
JMSF025I18+ TCAACCAACCAATCCACTCAAGAAATAACACCAAAAAGCTTGAGAAACAGTGAAAAACAA
____________________________________________________________
consensus TCAACCAACCAATCCACTCAAGAAATAACACCAAAAAGCTTGAGAAACAGTGAAAAACAA
. : . : . : . : . : . :
JMFF050B08+ ATTACTAGTACTGAAAAGTTTGGGGGAAAAGCAATCAAGTGGCTACCAAAATGCTAATAG
JMFF011C13+ ATTACTAGTACTGAAAAGTTTGGGGGAAAAGCAATCAAGTGGCTACCAAAATGCTAATAG
JMFS097G08+ ATTACTAGTACTGAAAAGTTTGGGGGAAAAGCAATCAAGTGGCTACCAAAATGCTAATAG
JMFS020H09+ ATTACTAGTACTGAAAAGTTTGGGGGAAAAGCAATCAAGTGGCTACCAAAATGCTAATAG
JMFS124H04+ ATTACTAGTACTGAAAAGTTTGGGGGAAAAGCAATCAAGTGGCTACCAAAATGCTAATAG
JMFS021C09+ ATTACTAGTACTGAAAAGTTTGGGGGAAAAGCAATCAAGTGGCTACCAAAATGCTAATAG
JMFS092B07+ ATTACTAGTACTGAAAAGTTTGGGGG-AAAGCAATCAAGTGGCTACCAAAATGCTAATAG
JMFS023E06+ ATTACTAGTACTGAAAAGTTTGGGGGAAAAGCAATCAAGTGGCTACCAAAATGCTAATAG
JMFS111H10+ ATTACTAGTACTGAAAAGTTTGGGGGAAAAGCAATCAAGTGGCTACCAAAATGCTAATAG
JMFS078C02+ ATTACTAGTACTGAAAAGTTTGGGGGAAAAGCAATCAAGTGGCTACCAAAATGCTAATAG
JMSF025I18+ ATTACTAGTACTGAAAAGTTTGGGGGAAAAGCAATCAAGTGGCTACCAAAATGCTAATAG
____________________________________________________________
consensus ATTACTAGTACTGAAAAGTTTGGGGGAAAAGCAATCAAGTGGCTACCAAAATGCTAATAG
. : . : . : . : . : . :
JMFF050B08+ GAAATTGGGAAAT
JMFF011C13+ GAAATTGGGAAAT
JMFS097G08+ GAAATTGGGAAATGAAGTCAATATAAAAAGGGGGTGTCTTTAAAGCAAGAACAGAAGGT
JMFS020H09+ GAAATTGGGAAATGAAGTCAATATAAAAAGGGGGTGTCTTTAAAGCAAGAACAGAAGGTG
JMFS124H04+ GAAATTGGGAAATGAAGTCAATATAAAAAGGGGGTGTCTTTAAAGCAAGAACAGAAGGTG
JMFS021C09+ GAAATTGGGAAATGAAGTCAATATAAAAAGGGGGTGTCTTTAAAGCAAGAACAGAAGGTG
JMFS092B07+ GAAATTGGGAAATGAAGTCAATATAAAAAGGGGGTGTCTTTAAAGCAAGAACAGAAGGTG
JMFS023E06+ GAAATTGGGAAATGAAGTCAATATAAAAAGGGGGTGTCTTTAAAGCAAGAACAGAAGGTG
JMFS111H10+ GAAATTGGGAAATGAAGTCAATATAAAAAGGGGGTGTCTTTAAAGCAAGAACAGAAGGTG
JMFS078C02+ GAAATTGGGAAATGAAGTCAATATAAAAAGGGGGTGTCTTTAAAGCAAGAACAGAAGGTG
JMSF025I18+ GAAATTGGGAAATGAAGTCAATATAAAAAGGGGGTGTCTTTAAAGCAAGAACAGAAGGTG
____________________________________________________________
consensus GAAATTGGGAAATGAAGTCAATATAAAAAGGGGGTGTCTTTAAAGCAAGAACAGAAGGTG
. : . : . : . : . : . :
JMFS020H09+ ATAAGAGGGGTGTGGAAATACTAGAATACTAGTAGAAA
JMFS124H04+ ATAAGAGGGGTGTGGAAATACTAGAATACTAGTAGAAAATTAGAGAAACAATGAGAATTT
JMFS021C09+ ATAAGAGGGGTGTGGAAATACTAGAATACTAGTAGAAAATTAGAGAAACAATGAGAATTT
JMFS092B07+ ATAAGAGGGGTGTGGAAATACTAGAATACTAGTAGAAAATTAGAGAAACAATGAGAATTT
JMFS023E06+ ATAAGAGGGGTGTGGAAATACTAGAATACTAGTAGAAAATTAGAGAAACAATGAGAATTT
JMFS111H10+ ATAAGAGGGGTGTGGAAATACTAGAATACTAGTAGAAAATTAGAGAAACAATGAGAATTT
JMFS078C02+ ATAAGAGGGGTGTGGAAATACTAGAATACTAGTAGAAAATTAGAGAAACAATGAGAATTT
JMSF025I18+ ATAAGAGGGGTGTGGAAATACTAGAATACTAGTAGAAAATTAGAGAAACAATGAGAATTT
____________________________________________________________
consensus ATAAGAGGGGTGTGGAAATACTAGAATACTAGTAGAAAATTAGAGAAACAATGAGAATTT
. : . : . : . : . : . :
JMFS124H04+ GTAGTCATGGTTTGCCAAGAAGCTGGCTAAAAG
JMFS021C09+ GTAGTCATGGTTTGCCAAGAAGCTGGCTAAAAGATGGGAAAGGCAATAGAAAAACAAGTG
JMFS092B07+ GTAGTCATGGTTTGCCAAGAAGCTGGCTAAAAGATGGGAAAGGCAATAGAAAAACAAGTG
JMFS023E06+ GTAGTCATGGTTTGCCAAGAAGCTGGCTAAAAGATGGGAAAGGCAATAGAAAAACAAGTG
JMFS111H10+ GTAGTCATGGTTTGCCAAGAAGCTGGCTAAAAGATGGGAAAGGCAATAGAAAAGCAAGTG
JMFS078C02+ GTAGTCATGGTTTGCCAAGAAGCTGGCTAAAAGATGGGAAAGGCAATAGAAAAACAAGTG
JMSF025I18+ GTAGTCATGGTTTGCCAAGAAGCTGGCTAAAAGATGGGAAAGGCAATAGAAAAACAAGTG
____________________________________________________________
consensus GTAGTCATGGTTTGCCAAGAAGCTGGCTAAAAGATGGGAAAGGCAATAGAAAAACAAGTG
. : . : . : . : . : . :
JMFS021C09+ TCAAATAATATAACGAGAAATTCAATGTACGATTCCTCCCCCATTTGCA
JMFS092B07+ TCAAATAATATAACGAGAAATTCAATGTACGATTCCTCCCCCATTTGCAGTTCTGAGAAG
JMFS023E06+ TCAAATAATATAACGAGAAATTCAATGTACGATTCCTCCCCCATTTGCAGTTCTGAGAAG
JMFS111H10+ TCAAATAATATAACGAGAAATTCAATGTACGATTCCTCCCCCATTTGCAGTTCTGAGAAG
JMFS078C02+ TCAAATAATATAACGAGAAATTCAATGTACGATTCCTCCCCCATTTGCAGTTCTGAGAAG
JMSF025I18+ TCAAATAATATAACGAGAAATTCAATGTACGATTCCTCCCCCATTTGCAGTTCTGAGAAG
____________________________________________________________
consensus TCAAATAATATAACGAGAAATTCAATGTACGATTCCTCCCCCATTTGCAGTTCTGAGAAG
. : . : . : . : . : . :
JMFS092B07+ GGGGAGCAGAAGAAACA
JMFS023E06+ GGGGAGCAGAAGAAACAGCAGACATAG
JMFS111H10+ GGGGAGCAGAAGAAACAGCAGACATAG
JMFS078C02+ GGGGAGCAGAAGAAACAGCAGACATAGACAATTGCTAAGGAAGC
JMSF025I18+ GGGGAGCAGAAGAAACAGCAGACATAGACAATTGCTAAGGAAGCACAGAAGCAAAAGACC
____________________________________________________________
consensus GGGGAGCAGAAGAAACAGCAGACATAGACAATTGCTAAGGAAGCACAGAAGCAAAAGACC