Contig 009345:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS047A03Sequence610009345 (4)emb|CDP05002.1|4e-53unnamed protein product [Coffea canephora]
JMFS140H09Sequence636009345 (4)emb|CDP05002.1|5e-55unnamed protein product [Coffea canephora]
JMSF025F24Sequence617009345 (4)emb|CDP05002.1|4e-49unnamed protein product [Coffea canephora]672012632 (5)ref|XP_009768690.1|3e-26PREDICTED: uncharacterized protein LOC104219681 isoform X3 [Nicotiana sylvestri
JMSF047B12Sequence682009345 (4)emb|CDP05002.1|6e-49unnamed protein product [Coffea canephora]102012632 (5)

Alignment

This contig is upended


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JMSF047B12+                                                TTTATACCCATACAGTCTTAGTA
                      ____________________________________________________________
consensus                                                  TTTATACCCATACAGTCTTAGTA
 
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JMFS047A03+                                               CTTTCACGCAGTTGCTCCTGAAGC
JMFS140H09+                      TTCCAACTCATATATCTTCTGCTCTCTNTCACGCAGTTGCTCCTGAAGC
JMSF047B12+           AGAAAACAGTGTTAAAATACCCATAT-GAATACTTGTACACTACTGTACGAACCTGAAGC
JMSF025F24+                                                TTTCACGCAGTTGCTCCTGAAGC
                      ____________________________________________________________
consensus             AGAAAACAGTGTTCCAATTCCTATATCTTCTGCTTTCTTTCACGCAGTTGCTCCTGAAGC
 
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JMFS047A03+           TTAGCATTGGCATTTGAGTGTTCTTTGACTTGAGCATCAAAGGTATTCCTCATTTCCAAA
JMFS140H09+           TTAGCATTGGCATTTGAGTGTTCTTTGACTTGAGCATCAAAGGTATTCCTCATTTCCAAA
JMSF047B12+           TTAGCATTGGCATTTGAGTGTTCTTTGACTTGAGCATCAAAGGTATTCCTCATTTCCAAA
JMSF025F24+           TTAGCATTGGCATTTGAGTGTTCTTTGACTTGAGCATCAAAGGTATTCCTCATTTCCAAA
                      ____________________________________________________________
consensus             TTAGCATTGGCATTTGAGTGTTCTTTGACTTGAGCATCAAAGGTATTCCTCATTTCCAAA
 
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JMFS047A03+           ATCTCAGACTTAGCAATAAGCTGAGCCCGAAGCTCAGTCTCCATTCTCTGCAACTCCTCT
JMFS140H09+           ATCTCAGACTTAGCAATAAGCTGAGCCCGAAGCTCAGTCTCCATTCTCTGCAACTCCTCT
JMSF047B12+           ATCTCAGACTTAGCAATAAGCTGAGCCCGAAGCTCAGTCTCCATTCTCTGCAACTCCTCT
JMSF025F24+           ATCTCAGACTTAGCAATAAGCTGAGCCCGAAGCTCAGTCTCCATTCTCTGCAACTCCTCT
                      ____________________________________________________________
consensus             ATCTCAGACTTAGCAATAAGCTGAGCCCGAAGCTCAGTCTCCATTCTCTGCAACTCCTCT
 
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JMFS047A03+           CTTTGTTTCGCCACAGTACTAAGTCTCTGCTGCAGAGGGTCATTGTCCAGGCTTCCATCA
JMFS140H09+           CTTTGTTTCGCCACAGTACTAAGTCTCTGCTGCAGAGGGTCATTGTCCAGGCTTCCATCA
JMSF047B12+           CTTTGTTTCGCCACAGTACTAAGTCTCTGCTGCAGAGGGTCATTGTCCAGGCTTCCATCA
JMSF025F24+           CTTTGTTTCGCCACAGTACTAAGTCTCTGCTGCAGAGGGTCATTGTCCAGGCTTCCATCA
                      ____________________________________________________________
consensus             CTTTGTTTCGCCACAGTACTAAGTCTCTGCTGCAGAGGGTCATTGTCCAGGCTTCCATCA
 
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JMFS047A03+           ACAGTAATAGAGCAAAAGTCCACATCAGCCGGACCTCTCCCCTGCTGCACCTCGTATATC
JMFS140H09+           ACAGTAATAGAGCAAAAGTCCACATCAGCCGGACCTCTCCCCTGCTGCACCTCGTATATC
JMSF047B12+           ACAGTAATAGAGCAAAAGTCCACATCAGCCGGACCTCTCCCCTGCTGCACCTCGTATATC
JMSF025F24+           ACAGTAATAGAGCAAAAGTCCACATCAGCCGGACCTCTCCCCTG------CTCGTATATC
                      ____________________________________________________________
consensus             ACAGTAATAGAGCAAAAGTCCACATCAGCCGGACCTCTCCCCTGCTGCACCTCGTATATC
 
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JMFS047A03+           AATCTCTCATCCGTCTGCCCAAACTTCGAACGTTCCGTCTCCGATGGGTCGGACACGACC
JMFS140H09+           AATCTCTCATCCGTCTGCCCAAACTTCGAACGTTCCGTCTCCGATGGGTCGGACACGACC
JMSF047B12+           AATCTCTCATCCGTCTGCCCAAACTTCGAACGTTCCGTCTCCGATGGGTCGGACACGACC
JMSF025F24+           AATCTCTCATCCGTCTGCCCAAACTTCGAACGTTCCGTCTCCGATGGGTCGGACACGACC
                      ____________________________________________________________
consensus             AATCTCTCATCCGTCTGCCCAAACTTCGAACGTTCCGTCTCCGATGGGTCGGACACGACC
 
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JMFS047A03+           CGCCACTCCTTGCGAGAAACCTGAGGGGAGGACACGGGGAGAGAAACACCGCGTGCGGCA
JMFS140H09+           CGCCACTCCTTGCGAGAAACCTGAGGGGAGGACACGGGGAGAGAAACACCGCGTGCGGCA
JMSF047B12+           CGCCACTCCTTGCGAGAAACCTGAGGGGAGGACACGGGGAGAGAAACACCGCGTGCGGCA
JMSF025F24+           CGCCACTCCTTGCGAGAAACCTGAGGGGAGGACACGGGGAGAGAAACACCGCGTGCGGCA
                      ____________________________________________________________
consensus             CGCCACTCCTTGCGAGAAACCTGAGGGGAGGACACGGGGAGAGAAACACCGCGTGCGGCA
 
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JMFS047A03+           GCAACACCAGCCGCGGCCTCCATTGGCGATTGAATCGGTGGCAGGACCGGGACTCCGATT
JMFS140H09+           GCAACACCAGCCGCGGCCTCCATTGGCGATTGAATCGGTGGCAGGACCGGGACTCCGATT
JMSF047B12+           GCAACACCAGCCGCGGCCTCCATTGGCGATTGAATCGGTGGCAGGACCGGGACTCCGATT
JMSF025F24+           GCAACACCAGCCGCGGCCTCCATTGGCGATTGAATCGGTGGCAGGACCGGGACTCCGATT
                      ____________________________________________________________
consensus             GCAACACCAGCCGCGGCCTCCATTGGCGATTGAATCGGTGGCAGGACCGGGACTCCGATT
 
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JMFS047A03+           CCTCAGAAACCCTAGCTTTAAAACCCTCAAAAGTTAATAATTGAAAATTGAACCCCAAAA
JMFS140H09+           CCTCAGAAACCCTAGCTTTAAAACCCTCAAAAGTTAATAATTGAAAATTGAACCCCAAAA
JMSF047B12+           CCTCAGAAACCCTAGCTTTAAAACCCTCAAAAGTTAATAATTGAAAATTGAACCCCAAAA
JMSF025F24+           CCTCAGAAACCCTAGCTTTAAAACCCTCAAAAGTTAATAATTGAAAATTGAACCCCAAAA
                      ____________________________________________________________
consensus             CCTCAGAAACCCTAGCTTTAAAACCCTCAAAAGTTAATAATTGAAAATTGAACCCCAAAA
 
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JMFS047A03+           AAAAGAAGGGAAATCTAGAGAGAGAAAGAACAGTTCAATGAAGTCAATGAGTGTTTGAAT
JMFS140H09+           AAAAGAAGGGAAATCTAGAGAGAGAAAGAACAGTTCAATGAAGTCAATGAGTGTTTGAAT
JMSF047B12+           AAAAGAAGGGAAATCTAGAGAGAGAAAGAACAGTTCAATGAAGTCAATGAGTGTTTGAAT
JMSF025F24+           AAAAGAAGGGAAATCTAGAGAGAGAAAGAACAGTTCAATGAAGTCAATGAGTGTTTGAAT
                      ____________________________________________________________
consensus             AAAAGAAGGGAAATCTAGAGAGAGAAAGAACAGTTCAATGAAGTCAATGAGTGTTTGAAT
 
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JMFS047A03+           CAGTTAATAATGTGTGAGAGCTTAGGTTTGAAAAAAA                       
JMFS140H09+           CAGTTAATAATGTGTGAGAGCTTAGGTTTGAAAAAAA                       
JMSF047B12+           CAGTTAATAATGTGTGAGAGCTTAGGTTTGAAAAAAAATGATCGAAGGCGAGAAAAA   
JMSF025F24+           CAGTTAATAATGTGTGAGAGCTTAGGTTTGAAAAAAAATGATCGAAGGCGAGAAAAAACC
                      ____________________________________________________________
consensus             CAGTTAATAATGTGTGAGAGCTTAGGTTTGAAAAAAAATGATCGAAGGCGAGAAAAAACC