| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF013O21 | Sequence | 616 | 009344 (12) | dbj|BAF46300.1| | 1e-81 | GPI-anchored protein [Ipomoea nil] | 750 | 009344 (12) | dbj|BAF46300.1| | 4e-52 | GPI-anchored protein [Ipomoea nil] |
| JMFF023K01 | Sequence | 481 | 009344 (12) | dbj|BAF46300.1| | 1e-74 | GPI-anchored protein [Ipomoea nil] | 696 | 009344 (12) | dbj|BAF46300.1| | 9e-78 | GPI-anchored protein [Ipomoea nil] |
| JMFF049D06 | Sequence | 631 | 009344 (12) | dbj|BAF46300.1| | 2e-56 | GPI-anchored protein [Ipomoea nil] | 491 | 009344 (12) | dbj|BAF46300.1| | 8e-53 | GPI-anchored protein [Ipomoea nil] |
| JMSF025E14 | Sequence | 701 | 009344 (12) | dbj|BAF46300.1| | 4e-62 | GPI-anchored protein [Ipomoea nil] | 698 | 009344 (12) | dbj|BAF46300.1| | 2e-77 | GPI-anchored protein [Ipomoea nil] |
| JMSF033O06 | Sequence | 682 | 009344 (12) | dbj|BAF46300.1| | 1e-77 | GPI-anchored protein [Ipomoea nil] | 232 | 009344 (12) | dbj|BAF46300.1| | 1e-29 | GPI-anchored protein [Ipomoea nil] |
| JMSF043G01 | Sequence | 779 | 009344 (12) | dbj|BAF46300.1| | 4e-77 | GPI-anchored protein [Ipomoea nil] | 759 | 009344 (12) | dbj|BAF46300.1| | 4e-77 | GPI-anchored protein [Ipomoea nil] |
This contig is upended
. : . : . : . : . : . :
rJMFF049D06- CCTTATGGCGGATCACCCTCGAGAGTTTT
____________________________________________________________
consensus CCTTATGGCGGATCACCCTCGAGAGTTTT
. : . : . : . : . : . :
rJMFF049D06- TTTTTTTTTTTTCTTTTTTTTTTTTCACCAAAAGAATTTTGACTTCCAAGATTTTTAAAT
rJMFF023K01- TCACCAAAAGAATTTTGACTTCCAAGA-TTTTAAAT
rJMFF013O21- TCACCAAAAGAATTTTGACTTCCAAGA-TTTTAAAT
JMSF043G01+ TCACCAAAAGAATTTTGACTTCCAAGA-TTTTAAAT
rJMSF043G01- AAAGAATTTTGACTTCCAAGA-TTTTAAAT
____________________________________________________________
consensus TTTTTTTTTTTTCTTTTTTTTTTTTCACCAAAAGAATTTTGACTTCCAAGA-TTTTAAAT
. : . : . : . : . : . :
rJMFF049D06- ACACACATTTTGTGTAATAATACAAATATGCATTAAGCTCTACTGTCGAAAAATACAAGC
rJMFF023K01- ACACACATTTTGTGTAATAATACAAATATGCATTAAGCTCTACTGTCGAAAAATACAAGC
rJMFF013O21- ACACACATTTTGTGTAATAATACAAATATGCATTAAGCTCTACTGTCGAAAAATACAAGC
JMSF043G01+ ACACACATTTTGTGTAATAATACAAATATGCATTAAGCTCTACTGTCGAAAAATACAAGC
JMSF033O06+ AAAAATACAAGC
rJMSF043G01- ACACACATTTTGTGTAATAATACAAATATGCATTAAGCTCTACTGTCGAAAAATACAAGC
rJMSF025E14- AAGC
____________________________________________________________
consensus ACACACATTTTGTGTAATAATACAAATATGCATTAAGCTCTACTGTCGAAAAATACAAGC
. : . : . : . : . : . :
rJMFF049D06- CTCACATACAGTTTTAAACATTTCAGTATAATACCCAGCTTCAGATAAACCGGGCTAACA
rJMFF023K01- CTCACATACAGTTTTAAACATTTCAGTATAATACCCAGCTTCAGATAAACCGGGCTAACA
rJMFF013O21- CTCACATACAGTTTTAAACATTTCAGTATAATACCCAGCTTCAGATAAACCGGGCTAACA
JMSF043G01+ CTCACATACAGTTTTAAACATTTCAGTATAATACCCAGCTTCAGATAAACCGGGCTAACA
JMSF033O06+ CTCACATACAGTTTTAAACATTTCAGTATAATACCCAGCTTCAGATAAACCGGGCTAACA
rJMSF043G01- CTCACATACAGTTTTAAACATTTCAGTATAATACCCAGCTTCAGATAAACCGGGCTAACA
rJMSF025E14- CTCACATACAGTTTTAAACATTTCAGTATAATACCCAGCTTCAGATAAACCGGGCTAACA
____________________________________________________________
consensus CTCACATACAGTTTTAAACATTTCAGTATAATACCCAGCTTCAGATAAACCGGGCTAACA
. : . : . : . : . : . :
rJMFF049D06- AAACTAGGAACGTTGCAGCAAACACTAGCATGGAAGACGGTTTACAGTTGATATAAGCGC
rJMFF023K01- AAACTAGGAACGTTGCAGCAAACACTAGCATGGAAGACGGTTTACAGTTGATATAAGCGC
rJMFF013O21- AAACTAGGAACGTTGCAGCAAACACTAGCATGGAAGACGGTTTACAGTTGATATAAGCGC
JMSF043G01+ AAACTAGGAACGTTGCAGCAAACACTAGCATGGAAGACGGTTTACAGTTGATATAAGCGC
JMSF033O06+ AAACTAGGAACGTTGCAGCAAACACTAGCATGGAAGACGGTTTACAGTTGATATAAGCGC
JMFF023K01+ TTTACAGTTGATATAAGCGC
rJMSF043G01- AAACTAGGAACGTTGCAGCAAACACTAGCATGGAAGACGGTTTACAGTTGATATAAGCGC
JMFF013O21+ ACGTTGCAGCAAACACTAGCATGGAAGACGGTTTACAGTTGATATAAGCGC
rJMSF025E14- AAACTAGGAACGTTGCAGCAAACACTAGCATGGAAGACGGTTTACAGTTGATATAAGCGC
____________________________________________________________
consensus AAACTAGGAACGTTGCAGCAAACACTAGCATGGAAGACGGTTTACAGTTGATATAAGCGC
. : . : . : . : . : . :
rJMFF049D06- CACTGTGATCATTAAATATCTGCGATGGCGATTGTGCAGGGCACGCGAGGCCTAGCTTAT
rJMFF023K01- CACTGTGATCATTAGATATCTGCGATGGCGATTGTGCAGGGCACGCGAGGCCTAGCTTAT
rJMFF013O21- CACTGTGATCATTAGATATCTGCGATGGCGATTGTGCAGGGCACGCGAGGCCTAGCTTAT
JMSF043G01+ CACTGTGATCATTAGATATCTGCGATGGCGATTGTGCAGGGCACGCGAGGCCTAGCTTAT
JMSF033O06+ CACTGTGATCATTAGATATCTGCGATGGCGATTGTGCAGGGCACGCGAGGCCTAGCTTAT
JMFF023K01+ CACTGTGATCATTAGATATNTGCGATGGCGATTGTGCAGGGCACGCGAGGCCTAGCTTAT
rJMSF043G01- CACTGTGATCATTAGATATCTGCGATGGCGATTGTGCAGGGCACGCGAGGCCTAGCTTAT
JMFF013O21+ CACTGTGATCATTAGATATCTGCGATGGCGATTGTGCAGGGCACGCGAGGCCTAGCTTAT
rJMSF025E14- CACTGTGATCATTAGATATCTGCGATGGCGATTGTGCAGGGCACGCGAGGCCTAGCTTAT
JMFF049D06+ GCGAGGCCTAGCTTAT
JMSF025E14+ TCTGCGATGGCGATTGTGCAGGCCACGCGAGGCCTAGCTTAT
____________________________________________________________
consensus CACTGTGATCATTAGATATCTGCGATGGCGATTGTGCAGGGCACGCGAGGCCTAGCTTAT
. : . : . : . : . : . :
rJMFF049D06- CTCCTTTACACTCGTTGGCGAAAAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
rJMFF023K01- CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
rJMFF013O21- CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
JMSF043G01+ CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
JMSF033O06+ CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
JMFF023K01+ CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
rJMSF043G01- CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
JMFF013O21+ CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
rJMSF025E14- CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
JMFF049D06+ CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
JMSF025E14+ CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
____________________________________________________________
consensus CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
. : . : . : . : . : . :
rJMFF049D06- TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
rJMFF023K01- TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
rJMFF013O21- TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
JMSF043G01+ TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
JMSF033O06+ TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
JMFF023K01+ TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
rJMSF033O06- CGTTTGTCAGGTCATTCANGTACTCCGCGTAAGGACAAG
rJMSF043G01- TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
JMFF013O21+ TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
rJMSF025E14- TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
JMFF049D06+ TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
JMSF025E14+ TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
____________________________________________________________
consensus TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
. : . : . : . : . : . :
rJMFF049D06- CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATT
rJMFF023K01- CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGTCCTTTGCATTGG
rJMFF013O21- CAAATTCTGTGAAAGCCCCGCAACATAGCTTCGGGGGGGTATTGTGGTCCTTTGCATTGG
JMSF043G01+ CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGTCCTTTGCATTGG
JMSF033O06+ CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGTCCTTTGCATTGG
JMFF023K01+ CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGTCCTTTGCATTGG
rJMSF033O06- CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGNCCTTTGCATTGG
rJMSF043G01- CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGTCCTTTGCATTGG
JMFF013O21+ CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGTCCTTTGCATTGG
rJMSF025E14- CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGTCCTTTGCATTGG
JMFF049D06+ CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGTCCTTTGCATTGG
JMSF025E14+ CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGTCCTTTGCATTGG
____________________________________________________________
consensus CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGTCCTTTGCATTGG
. : . : . : . : . : . :
rJMFF023K01- CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
rJMFF013O21- CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
JMSF043G01+ CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
JMSF033O06+ CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
JMFF023K01+ CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
rJMSF033O06- CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGNCATGCTTTCTTAGCCTGA
rJMSF043G01- CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
JMFF013O21+ CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
rJMSF025E14- CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
JMFF049D06+ CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
JMSF025E14+ CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
____________________________________________________________
consensus CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
. : . : . : . : . : . :
rJMFF023K01- AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
rJMFF013O21- AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
JMSF043G01+ AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
JMSF033O06+ AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
JMFF023K01+ AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
rJMSF033O06- ANGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGACATAGAACTGGAT
rJMSF043G01- AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
JMFF013O21+ AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
rJMSF025E14- AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
JMFF049D06+ AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
JMSF025E14+ AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
____________________________________________________________
consensus AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
. : . : . : . : . : . :
rJMFF023K01- GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
rJMFF013O21- GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
JMSF043G01+ GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
JMSF033O06+ GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
JMFF023K01+ GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
rJMSF033O06- GAAGAAAAGCCTGC
rJMSF043G01- GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
JMFF013O21+ GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
rJMSF025E14- GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
JMFF049D06+ GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
JMSF025E14+ GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
____________________________________________________________
consensus GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
. : . : . : . : . : . :
rJMFF023K01- TGTCCCAACTCCATTG
rJMFF013O21- TGTCCCAACTCCATTGTTGCGAGAAAGATCTTCTATCTGANCTAGTCAATATGAATATGG
JMSF043G01+ TGTCCCAACTCCATTGTTGCGAGAAAGATCTTCTATCTGAGCTAGTCAATATGAATATGG
JMSF033O06+ TGTCCCAACTCCATTGTTGCGAGAAAGATCTTCTATCTGAGCTAGTCAATATGAATATGG
JMFF023K01+ TGTCCCAACTCCATTGTTGCGAG
rJMSF043G01- TGTCCCAACTCCATTGTTGCGAGAAAGATCTTCTATCTGAGCTAGTCAATATGAATATGG
JMFF013O21+ TGTCCCAACTCCATTGTTGCGAGAAAGATCTTCTATCTGAGCTAGTCAATATGAATATGG
rJMSF025E14- TGTCCCAACTCCATTGTTGCGAGAAAGATCTTCTATCTGAGCTAGTCAATATGAATATGG
JMFF049D06+ TGTCCCAACTCCATTGTTGCGAGAAAGATCTTCTATCTGAGCTAGTCAATATGAATATGG
JMSF025E14+ TGTCCCAACTCCATTGTTGCGAGAAAGATCTTCTATCTGAGCTAGTCAATATGAATATGG
____________________________________________________________
consensus TGTCCCAACTCCATTGTTGCGAGAAAGATCTTCTATCTGAGCTAGTCAATATGAATATGG
. : . : . : . : . : . :
rJMFF013O21- GGCGTGAAAACGCGTATGA
JMSF043G01+ GGCGTGAAAACGCGTATGAATAGTGGGATTTACAGAAATGGGCAAATACAGAGTAAAATC
JMSF033O06+ GGCGTGAAAACGCGTATGAATAGTGGGATTTACAGAAATGGGCAAATACAGAGTAAAATC
rJMSF043G01- GGCGTGAAAACGCGTATGAATAGTGGGATTTACAGAAATGGGCAAATACAGAGTAAAATC
JMFF013O21+ GGCGTGAAAACGCGTATGAATAGTGGGATTTACAGAAATGGGCAAATACAGAGTAAAATC
rJMSF025E14- GGCGTGAAAACGCGTATGAATAGTGGGATTTACAGAAATGGGCAAATACAGAGTAAAATC
JMFF049D06+ GGCGTGAAAACGCGTATGAATAGTGGGATTTACAGAAATGGGCAAATACAGAGTAAAATC
JMSF025E14+ GGCGTGAAAACGCGTATGAATAGTGGGATTTACAGAAATGGGCAAATACAGAGTAAAATC
____________________________________________________________
consensus GGCGTGAAAACGCGTATGAATAGTGGGATTTACAGAAATGGGCAAATACAGAGTAAAATC
. : . : . : . : . : . :
JMSF043G01+ AATCAGTTTC
JMSF033O06+ AATCAGTTTC
rJMSF043G01- AATCAGTTTC
JMFF013O21+ AATCAGTTTCGAGAATAGGGAGAAAC
rJMSF025E14- AATCAGTTTCGAGAATAGGGAGAAACGGAAGAATT
JMFF049D06+ AATCAGTTTCGAGAATAGGGAGAAACGGAAGAATTAAAAAGAAAATTGGAAGAATTTTAA
JMSF025E14+ AATCAGTTTCGAGAATAGGGAGAAACGGAAGAATTAAAAAGAAAATTGGAAGAATTTTAA
____________________________________________________________
consensus AATCAGTTTCGAGAATAGGGAGAAACGGAAGAATTAAAAAGAAAATTGGAAGAATTTTAA
. : . : . : . : . : . :
JMFF049D06+ AAAAATAATAAAAATATGCATAGTACAGCTGGGTTGCGTAGAGAGAGACTGAGACAGATT
JMSF025E14+ AAAAATAATAAAAATATGCATAGTACAGCTGGGTTGCGTAGAGAGAGACTGAGACAGATT
____________________________________________________________
consensus AAAAATAATAAAAATATGCATAGTACAGCTGGGTTGCGTAGAGAGAGACTGAGACAGATT
. : . : . : . : . : . :
JMFF049D06+ ACAGATAGTAGTTGAT
JMSF025E14+ ACAGATAGTAGTTGATGGAGTACAGGCTAGGTCGTCAACACGAAAACATGTTTCCTCTTC
____________________________________________________________
consensus ACAGATAGTAGTTGATGGAGTACAGGCTAGGTCGTCAACACGAAAACATGTTTCCTCTTC