Contig 009344:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013O21Sequence616009344 (12)dbj|BAF46300.1|1e-81GPI-anchored protein [Ipomoea nil]750009344 (12)dbj|BAF46300.1|4e-52GPI-anchored protein [Ipomoea nil]
JMFF023K01Sequence481009344 (12)dbj|BAF46300.1|1e-74GPI-anchored protein [Ipomoea nil]696009344 (12)dbj|BAF46300.1|9e-78GPI-anchored protein [Ipomoea nil]
JMFF049D06Sequence631009344 (12)dbj|BAF46300.1|2e-56GPI-anchored protein [Ipomoea nil]491009344 (12)dbj|BAF46300.1|8e-53GPI-anchored protein [Ipomoea nil]
JMSF025E14Sequence701009344 (12)dbj|BAF46300.1|4e-62GPI-anchored protein [Ipomoea nil]698009344 (12)dbj|BAF46300.1|2e-77GPI-anchored protein [Ipomoea nil]
JMSF033O06Sequence682009344 (12)dbj|BAF46300.1|1e-77GPI-anchored protein [Ipomoea nil]232009344 (12)dbj|BAF46300.1|1e-29GPI-anchored protein [Ipomoea nil]
JMSF043G01Sequence779009344 (12)dbj|BAF46300.1|4e-77GPI-anchored protein [Ipomoea nil]759009344 (12)dbj|BAF46300.1|4e-77GPI-anchored protein [Ipomoea nil]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF049D06- CCTTATGGCGGATCACCCTCGAGAGTTTT
                      ____________________________________________________________
consensus CCTTATGGCGGATCACCCTCGAGAGTTTT
 
. : . : . : . : . : . :
rJMFF049D06- TTTTTTTTTTTTCTTTTTTTTTTTTCACCAAAAGAATTTTGACTTCCAAGATTTTTAAAT
rJMFF023K01- TCACCAAAAGAATTTTGACTTCCAAGA-TTTTAAAT
rJMFF013O21- TCACCAAAAGAATTTTGACTTCCAAGA-TTTTAAAT
JMSF043G01+ TCACCAAAAGAATTTTGACTTCCAAGA-TTTTAAAT
rJMSF043G01- AAAGAATTTTGACTTCCAAGA-TTTTAAAT
                      ____________________________________________________________
consensus TTTTTTTTTTTTCTTTTTTTTTTTTCACCAAAAGAATTTTGACTTCCAAGA-TTTTAAAT
 
. : . : . : . : . : . :
rJMFF049D06- ACACACATTTTGTGTAATAATACAAATATGCATTAAGCTCTACTGTCGAAAAATACAAGC
rJMFF023K01- ACACACATTTTGTGTAATAATACAAATATGCATTAAGCTCTACTGTCGAAAAATACAAGC
rJMFF013O21- ACACACATTTTGTGTAATAATACAAATATGCATTAAGCTCTACTGTCGAAAAATACAAGC
JMSF043G01+ ACACACATTTTGTGTAATAATACAAATATGCATTAAGCTCTACTGTCGAAAAATACAAGC
JMSF033O06+ AAAAATACAAGC
rJMSF043G01- ACACACATTTTGTGTAATAATACAAATATGCATTAAGCTCTACTGTCGAAAAATACAAGC
rJMSF025E14- AAGC
                      ____________________________________________________________
consensus ACACACATTTTGTGTAATAATACAAATATGCATTAAGCTCTACTGTCGAAAAATACAAGC
 
. : . : . : . : . : . :
rJMFF049D06- CTCACATACAGTTTTAAACATTTCAGTATAATACCCAGCTTCAGATAAACCGGGCTAACA
rJMFF023K01- CTCACATACAGTTTTAAACATTTCAGTATAATACCCAGCTTCAGATAAACCGGGCTAACA
rJMFF013O21- CTCACATACAGTTTTAAACATTTCAGTATAATACCCAGCTTCAGATAAACCGGGCTAACA
JMSF043G01+ CTCACATACAGTTTTAAACATTTCAGTATAATACCCAGCTTCAGATAAACCGGGCTAACA
JMSF033O06+ CTCACATACAGTTTTAAACATTTCAGTATAATACCCAGCTTCAGATAAACCGGGCTAACA
rJMSF043G01- CTCACATACAGTTTTAAACATTTCAGTATAATACCCAGCTTCAGATAAACCGGGCTAACA
rJMSF025E14- CTCACATACAGTTTTAAACATTTCAGTATAATACCCAGCTTCAGATAAACCGGGCTAACA
                      ____________________________________________________________
consensus CTCACATACAGTTTTAAACATTTCAGTATAATACCCAGCTTCAGATAAACCGGGCTAACA
 
. : . : . : . : . : . :
rJMFF049D06- AAACTAGGAACGTTGCAGCAAACACTAGCATGGAAGACGGTTTACAGTTGATATAAGCGC
rJMFF023K01- AAACTAGGAACGTTGCAGCAAACACTAGCATGGAAGACGGTTTACAGTTGATATAAGCGC
rJMFF013O21- AAACTAGGAACGTTGCAGCAAACACTAGCATGGAAGACGGTTTACAGTTGATATAAGCGC
JMSF043G01+ AAACTAGGAACGTTGCAGCAAACACTAGCATGGAAGACGGTTTACAGTTGATATAAGCGC
JMSF033O06+ AAACTAGGAACGTTGCAGCAAACACTAGCATGGAAGACGGTTTACAGTTGATATAAGCGC
JMFF023K01+ TTTACAGTTGATATAAGCGC
rJMSF043G01- AAACTAGGAACGTTGCAGCAAACACTAGCATGGAAGACGGTTTACAGTTGATATAAGCGC
JMFF013O21+ ACGTTGCAGCAAACACTAGCATGGAAGACGGTTTACAGTTGATATAAGCGC
rJMSF025E14- AAACTAGGAACGTTGCAGCAAACACTAGCATGGAAGACGGTTTACAGTTGATATAAGCGC
                      ____________________________________________________________
consensus AAACTAGGAACGTTGCAGCAAACACTAGCATGGAAGACGGTTTACAGTTGATATAAGCGC
 
. : . : . : . : . : . :
rJMFF049D06- CACTGTGATCATTAAATATCTGCGATGGCGATTGTGCAGGGCACGCGAGGCCTAGCTTAT
rJMFF023K01- CACTGTGATCATTAGATATCTGCGATGGCGATTGTGCAGGGCACGCGAGGCCTAGCTTAT
rJMFF013O21- CACTGTGATCATTAGATATCTGCGATGGCGATTGTGCAGGGCACGCGAGGCCTAGCTTAT
JMSF043G01+ CACTGTGATCATTAGATATCTGCGATGGCGATTGTGCAGGGCACGCGAGGCCTAGCTTAT
JMSF033O06+ CACTGTGATCATTAGATATCTGCGATGGCGATTGTGCAGGGCACGCGAGGCCTAGCTTAT
JMFF023K01+ CACTGTGATCATTAGATATNTGCGATGGCGATTGTGCAGGGCACGCGAGGCCTAGCTTAT
rJMSF043G01- CACTGTGATCATTAGATATCTGCGATGGCGATTGTGCAGGGCACGCGAGGCCTAGCTTAT
JMFF013O21+ CACTGTGATCATTAGATATCTGCGATGGCGATTGTGCAGGGCACGCGAGGCCTAGCTTAT
rJMSF025E14- CACTGTGATCATTAGATATCTGCGATGGCGATTGTGCAGGGCACGCGAGGCCTAGCTTAT
JMFF049D06+ GCGAGGCCTAGCTTAT
JMSF025E14+ TCTGCGATGGCGATTGTGCAGGCCACGCGAGGCCTAGCTTAT
                      ____________________________________________________________
consensus CACTGTGATCATTAGATATCTGCGATGGCGATTGTGCAGGGCACGCGAGGCCTAGCTTAT
 
. : . : . : . : . : . :
rJMFF049D06- CTCCTTTACACTCGTTGGCGAAAAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
rJMFF023K01- CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
rJMFF013O21- CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
JMSF043G01+ CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
JMSF033O06+ CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
JMFF023K01+ CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
rJMSF043G01- CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
JMFF013O21+ CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
rJMSF025E14- CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
JMFF049D06+ CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
JMSF025E14+ CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
                      ____________________________________________________________
consensus CTCCTTTACACTCGTTGGCGAAGAGCCCGGGCGGGTACTTGCCATACAGGTTGATGTAAC
 
. : . : . : . : . : . :
rJMFF049D06- TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
rJMFF023K01- TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
rJMFF013O21- TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
JMSF043G01+ TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
JMSF033O06+ TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
JMFF023K01+ TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
rJMSF033O06- CGTTTGTCAGGTCATTCANGTACTCCGCGTAAGGACAAG
rJMSF043G01- TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
JMFF013O21+ TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
rJMSF025E14- TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
JMFF049D06+ TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
JMSF025E14+ TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
                      ____________________________________________________________
consensus TAAACATCGTAGAAGCACAATCGTTTGTCAGGTCATTCAAGTACTCCGCGTAAGGACAAG
 
. : . : . : . : . : . :
rJMFF049D06- CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATT
rJMFF023K01- CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGTCCTTTGCATTGG
rJMFF013O21- CAAATTCTGTGAAAGCCCCGCAACATAGCTTCGGGGGGGTATTGTGGTCCTTTGCATTGG
JMSF043G01+ CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGTCCTTTGCATTGG
JMSF033O06+ CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGTCCTTTGCATTGG
JMFF023K01+ CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGTCCTTTGCATTGG
rJMSF033O06- CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGNCCTTTGCATTGG
rJMSF043G01- CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGTCCTTTGCATTGG
JMFF013O21+ CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGTCCTTTGCATTGG
rJMSF025E14- CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGTCCTTTGCATTGG
JMFF049D06+ CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGTCCTTTGCATTGG
JMSF025E14+ CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGTCCTTTGCATTGG
                      ____________________________________________________________
consensus CAAATTCTGTGAAAGCCCCGCAACATAGCTTC-GGGGGGTATTGTGGTCCTTTGCATTGG
 
. : . : . : . : . : . :
rJMFF023K01- CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
rJMFF013O21- CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
JMSF043G01+ CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
JMSF033O06+ CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
JMFF023K01+ CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
rJMSF033O06- CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGNCATGCTTTCTTAGCCTGA
rJMSF043G01- CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
JMFF013O21+ CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
rJMSF025E14- CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
JMFF049D06+ CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
JMSF025E14+ CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
                      ____________________________________________________________
consensus CTCGTGATCACGGTGTAATTCTGGAACTCAAAGTTAACCGGGCATGCTTTCTTAGCCTGA
 
. : . : . : . : . : . :
rJMFF023K01- AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
rJMFF013O21- AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
JMSF043G01+ AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
JMSF033O06+ AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
JMFF023K01+ AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
rJMSF033O06- ANGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGACATAGAACTGGAT
rJMSF043G01- AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
JMFF013O21+ AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
rJMSF025E14- AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
JMFF049D06+ AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
JMSF025E14+ AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
                      ____________________________________________________________
consensus AGGAGGCTCCTCCCAGTGGAAGATTGAGAAACAAAAACACCATCTGAGATAGAACTGGAT
 
. : . : . : . : . : . :
rJMFF023K01- GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
rJMFF013O21- GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
JMSF043G01+ GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
JMSF033O06+ GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
JMFF023K01+ GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
rJMSF033O06- GAAGAAAAGCCTGC
rJMSF043G01- GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
JMFF013O21+ GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
rJMSF025E14- GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
JMFF049D06+ GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
JMSF025E14+ GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
                      ____________________________________________________________
consensus GAAGAAAAGCCTGCAAATAGCGAAAGAGATAAAAGCAGAAAAAATGAAAGACAGAAACTG
 
. : . : . : . : . : . :
rJMFF023K01- TGTCCCAACTCCATTG
rJMFF013O21- TGTCCCAACTCCATTGTTGCGAGAAAGATCTTCTATCTGANCTAGTCAATATGAATATGG
JMSF043G01+ TGTCCCAACTCCATTGTTGCGAGAAAGATCTTCTATCTGAGCTAGTCAATATGAATATGG
JMSF033O06+ TGTCCCAACTCCATTGTTGCGAGAAAGATCTTCTATCTGAGCTAGTCAATATGAATATGG
JMFF023K01+ TGTCCCAACTCCATTGTTGCGAG
rJMSF043G01- TGTCCCAACTCCATTGTTGCGAGAAAGATCTTCTATCTGAGCTAGTCAATATGAATATGG
JMFF013O21+ TGTCCCAACTCCATTGTTGCGAGAAAGATCTTCTATCTGAGCTAGTCAATATGAATATGG
rJMSF025E14- TGTCCCAACTCCATTGTTGCGAGAAAGATCTTCTATCTGAGCTAGTCAATATGAATATGG
JMFF049D06+ TGTCCCAACTCCATTGTTGCGAGAAAGATCTTCTATCTGAGCTAGTCAATATGAATATGG
JMSF025E14+ TGTCCCAACTCCATTGTTGCGAGAAAGATCTTCTATCTGAGCTAGTCAATATGAATATGG
                      ____________________________________________________________
consensus TGTCCCAACTCCATTGTTGCGAGAAAGATCTTCTATCTGAGCTAGTCAATATGAATATGG
 
. : . : . : . : . : . :
rJMFF013O21- GGCGTGAAAACGCGTATGA
JMSF043G01+ GGCGTGAAAACGCGTATGAATAGTGGGATTTACAGAAATGGGCAAATACAGAGTAAAATC
JMSF033O06+ GGCGTGAAAACGCGTATGAATAGTGGGATTTACAGAAATGGGCAAATACAGAGTAAAATC
rJMSF043G01- GGCGTGAAAACGCGTATGAATAGTGGGATTTACAGAAATGGGCAAATACAGAGTAAAATC
JMFF013O21+ GGCGTGAAAACGCGTATGAATAGTGGGATTTACAGAAATGGGCAAATACAGAGTAAAATC
rJMSF025E14- GGCGTGAAAACGCGTATGAATAGTGGGATTTACAGAAATGGGCAAATACAGAGTAAAATC
JMFF049D06+ GGCGTGAAAACGCGTATGAATAGTGGGATTTACAGAAATGGGCAAATACAGAGTAAAATC
JMSF025E14+ GGCGTGAAAACGCGTATGAATAGTGGGATTTACAGAAATGGGCAAATACAGAGTAAAATC
                      ____________________________________________________________
consensus GGCGTGAAAACGCGTATGAATAGTGGGATTTACAGAAATGGGCAAATACAGAGTAAAATC
 
. : . : . : . : . : . :
JMSF043G01+ AATCAGTTTC
JMSF033O06+ AATCAGTTTC
rJMSF043G01- AATCAGTTTC
JMFF013O21+ AATCAGTTTCGAGAATAGGGAGAAAC
rJMSF025E14- AATCAGTTTCGAGAATAGGGAGAAACGGAAGAATT
JMFF049D06+ AATCAGTTTCGAGAATAGGGAGAAACGGAAGAATTAAAAAGAAAATTGGAAGAATTTTAA
JMSF025E14+ AATCAGTTTCGAGAATAGGGAGAAACGGAAGAATTAAAAAGAAAATTGGAAGAATTTTAA
                      ____________________________________________________________
consensus AATCAGTTTCGAGAATAGGGAGAAACGGAAGAATTAAAAAGAAAATTGGAAGAATTTTAA
 
. : . : . : . : . : . :
JMFF049D06+ AAAAATAATAAAAATATGCATAGTACAGCTGGGTTGCGTAGAGAGAGACTGAGACAGATT
JMSF025E14+ AAAAATAATAAAAATATGCATAGTACAGCTGGGTTGCGTAGAGAGAGACTGAGACAGATT
                      ____________________________________________________________
consensus AAAAATAATAAAAATATGCATAGTACAGCTGGGTTGCGTAGAGAGAGACTGAGACAGATT
 
. : . : . : . : . : . :
JMFF049D06+ ACAGATAGTAGTTGAT
JMSF025E14+ ACAGATAGTAGTTGATGGAGTACAGGCTAGGTCGTCAACACGAAAACATGTTTCCTCTTC
                      ____________________________________________________________
consensus ACAGATAGTAGTTGATGGAGTACAGGCTAGGTCGTCAACACGAAAACATGTTTCCTCTTC