| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF007F23 | Sequence | 353 | 009343 (9) | 725 | 009343 (9) | ref|XP_009613129.1| | 3e-78 | PREDICTED: 5'-adenylylsulfate reductase-like 4 [Nicotiana tomentosiformis] | |||
| JMSF007K12 | Sequence | 357 | 009343 (9) | 791 | 009343 (9) | ref|XP_009613129.1| | 1e-93 | PREDICTED: 5'-adenylylsulfate reductase-like 4 [Nicotiana tomentosiformis] | |||
| JMSF016C09 | Sequence | 250 | 009343 (9) | ||||||||
| JMSF025E04 | Sequence | 486 | 009343 (9) | emb|CDP01065.1| | 5e-05 | unnamed protein product [Coffea canephora] | 650 | 009343 (9) | emb|CDP01065.1| | 1e-74 | unnamed protein product [Coffea canephora] |
| JMSF038E11 | Sequence | 695 | 009343 (9) | emb|CDP01065.1| | 5e-67 | unnamed protein product [Coffea canephora] | 818 | 009343 (9) | ref|XP_009613129.1| | 1e-76 | PREDICTED: 5'-adenylylsulfate reductase-like 4 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF007F23- ATAGTGAGCAAAA
rJMSF007K12- ATAGGTTAACACTATTCTTTCATAGTGAGCAAAA
rJMSF038E11- ATAGTGAGCAAAA
____________________________________________________________
consensus ATAGGTTAACACTATTCTTTCATAGTGAGCAAAA
. : . : . : . : . : . :
rJMSF007F23- AATGGAAAGCATAACTAATCTACAACAAAAGAGTCAATTATGTTGCTTCAACAGCCAAAT
rJMSF025E04- GAGTCAATTATGTTGCTTCAACAGCCAAAT
rJMSF007K12- AATGGAAAGCATAACTAATCTACAACAAAAGAGTCAATTATGTTGCTTCAACAGCCAAAT
rJMSF038E11- CATGGAAAGCATAGCTAATCTACANCAAANGAGTCNATTATGTTGCTTCANCAGCCAAAT
____________________________________________________________
consensus AATGGAAAGCATAACTAATCTACAACAAAAGAGTCAATTATGTTGCTTCAACAGCCAAAT
. : . : . : . : . : . :
rJMSF007F23- ATTAAATTTTCGTTGTTCCCCTCACAATGAAACAAACCCAAAGGGAGGTAGCTGAATATT
rJMSF025E04- ATTNAATTTTCGTTGTTCCCCTCACNATGAAACAAACCCAAAGGGAGGTAGCTGAATATT
rJMSF007K12- ATTAAATTTTCGTTGTTCCCCTCACAATGAAACAAACCCAAAGGGAGGTAGCTGAATATT
rJMSF038E11- ATTAANTTTTCGTTGTTCCCCTCACAATGAAACAAACCCAAAGGGAGGTAGCTGAATATT
____________________________________________________________
consensus ATTAAATTTTCGTTGTTCCCCTCACAATGAAACAAACCCAAAGGGAGGTAGCTGAATATT
. : . : . : . : . : . :
rJMSF007F23- TCTAAAAGAAATATGTAGTTTAAATTTAACCCCCAAATTAATCAATGAGTTGAACTTACT
rJMSF025E04- TCTAAAAGAAATATGTAGTTTAAATTTAACCCCCAAATTAATCAGTGAGTTGAACTTACT
rJMSF007K12- TCTAAAAGAAATATGTAGTTTAAATTTAACCCCCAAATTAATCAATGAGTTGAACTTACT
rJMSF038E11- TCTAAAAGAAATATGTAGTTTAANTTTAACCCCCAAATTAATCAATGAGTTGAACTTACT
____________________________________________________________
consensus TCTAAAAGAAATATGTAGTTTAAATTTAACCCCCAAATTAATCAATGAGTTGAACTTACT
. : . : . : . : . : . :
rJMSF007F23- GGTCCCACCCGACTTGAGCTTGCCTCACCGAATGAAACAGAAGCTAAAGACTTGGAAGCC
rJMSF025E04- GGTCCCACCCGACTTGAGCTTGCCTCACCGAATGAAACAGAAGCTAAAGACTTGGAAGCC
rJMSF007K12- GGTCCCACCCGACTTGAGCTTGCCTCACCGAATGAAACAGAAGCTAAAGACTTGGAAGCC
rJMSF038E11- GGNCCCACCCGACTTGAGCTTGCCNCACCGAATGAAACAGAAGCTAAAGACTTGGAAGCC
____________________________________________________________
consensus GGTCCCACCCGACTTGAGCTTGCCTCACCGAATGAAACAGAAGCTAAAGACTTGGAAGCC
. : . : . : . : . : . :
rJMSF007F23- CATACCTTGGCATTCATAGCTCCTTCCTGCAAATTGCTTCTCTTGCATGGTTCCTTCAGA
rJMSF025E04- CATACCTTGGCATTCATAGCTCCTTCCTGCAAATTGCTTCTCTTGCATGGTTCCTTCAGA
rJMSF007K12- CATACCTTGGCATTCATAGCTCCTTCCTGCAAATTGCTTCTCTTGCATGGTTCCTTCAGA
rJMSF038E11- CATACCTTGGCNTTCATAGCTCCTTCCTGCNAATTGCTTCTCTTGCNTGGTTCCTTCNGA
____________________________________________________________
consensus CATACCTTGGCATTCATAGCTCCTTCCTGCAAATTGCTTCTCTTGCATGGTTCCTTCAGA
. : . : . : . : . : . :
rJMSF007F23- GAATTAAATAATTGTAATCCCCGATGCATGTAGAGCAGAGGATGCTCCCACAAGCTACTT
rJMSF025E04- GAATTAAATAATTGTANTCCCCGATGCATGTAGAGCAGAGGATGCTCCCACAAGCTACTT
rJMSF007K12- GAATTAAATAATTGTAATCCCCGATGCATGTAGAGCAGAGGATGCTCCCACAAGCTACTT
rJMSF038E11- GAATTAAATAATTGTAATCCCCGATGCATGTNNAGCAGAGGATGCTCCCACAAGCTACTT
____________________________________________________________
consensus GAATTAAATAATTGTAATCCCCGATGCATGTAGAGCAGAGGATGCTCCCACAAGCTACTT
. : . : . : . : . : . :
rJMSF007F23- ATCCTCATATTGTAGCTCCTATAAGCAAATTGAGCAAACCTACGAATATATGGGAAAAGA
rJMSF025E04- ATCCTCATATTGTAGCTCCTATAAGCAAATTGAGCAAACCTACGAATATATGGGAAAAGA
rJMSF007K12- ATCCTCATATTGTAGCTCCTATAAGCAAATTGAGCAAACCTACGAATATATGGGAAAAGA
rJMSF038E11- ATCCTCATATTGTAGCTCCTATAAGCAAATTGAGCAAACCTACGAATATATGGGAAAAGA
____________________________________________________________
consensus ATCCTCATATTGTAGCTCCTATAAGCAAATTGAGCAAACCTACGAATATATGGGAAAAGA
. : . : . : . : . : . :
rJMSF007F23- GCATAGAGCAATCTCATAAGAACAAATACAGTTGCCAACATCAAGTATGTCTCCTGCCGA
rJMSF025E04- GCATAGAGCAATCTCATAAGAACAAATACAGTTGCCAACATCAAGTATGTCTCCTGCCGA
rJMSF007K12- GCATAGAGCAATCTCATAAGAACAAATACAGTTGCCAACATCAAGTATGTCTCCTGCCGA
rJMSF038E11- GCATAGAGCAATCTCATAAGANCANATACAGTTGCCAACNTCNAGTATGTCTCCTGCCGA
____________________________________________________________
consensus GCATAGAGCAATCTCATAAGAACAAATACAGTTGCCAACATCAAGTATGTCTCCTGCCGA
. : . : . : . : . : . :
rJMSF007F23- AGTAAGTTCTCAGGAGACCTCGCCCAGGAGAATGGGCAACTTTCCTGTTCACTGCCACTA
rJMSF025E04- AGTAAGTTCTCAGGAGACCTCGCCCAGGAGAATGGGCAACTTTCCTGTTCACTGCCACTA
rJMSF007K12- AGTAAGTTCTCAGGAGACCTCGCCCAGGAGAATGGGCAACTTTCCTGTTCACTGCCACTA
rJMSF038E11- AGTANGTTCTCAGGAGACCTCGCCNAGGAGAATGGGCAACTTTCCTGTTCACTGCCACTA
____________________________________________________________
consensus AGTAAGTTCTCAGGAGACCTCGCCCAGGAGAATGGGCAACTTTCCTGTTCACTGCCACTA
. : . : . : . : . : . :
rJMSF007F23- TACCCATCGTGGCTTGTAGAACATCCAATCTTGTCTAGAGATATGCCATCCTCTGTTGAT
rJMSF025E04- TACCCATCGTGGCTTGTAGAACATCCGATCTTGTCTAGAGATATGCCATCCTCTGTTGAT
rJMSF007K12- TACCCATCGTGGCTTGTAGAACATCCAATCTTGTCTAGAGATATGCCATCCTCTGTTGAT
rJMSF038E11- TACCCATCGTGGCTTGNAGAACATCCANTCTTGTCNAGAGATATGCCATCCTCNGTTGAT
____________________________________________________________
consensus TACCCATCGTGGCTTGTAGAACATCCAATCTTGTCTAGAGATATGCCATCCTCTGTTGAT
. : . : . : . : . : . :
rJMSF007F23- GTCTTAACACCAGTAACTCCATTATAGAAAGTGATTAGAGAATCAAGGGTCCTGGGGCCA
rJMSF025E04- GTCTTAACANCAGTAACTCCATTATAGAAAGTGATTAGAGAATCAAGGGTCCTGGGGCCA
rJMSF007K12- GTCTTAACACCAGTAACTCCATTATAGAAAGTGATTAGAGAATCAAGGGTCCTGGGGCCA
rJMSF038E11- GTCNTANCNCCAGTAACTCCATTATAGAAAGTGATTAGAGAATCNAGGGTCCTGGGGCCA
JMSF038E11+ TATAGAAAGTGATTAGAGAATCAAGGGTCCTGGGGCCA
____________________________________________________________
consensus GTCTTAACACCAGTAACTCCATTATAGAAAGTGATTAGAGAATCAAGGGTCCTGGGGCCA
. : . : . : . : . : . :
rJMSF007F23- TGATATTGAACACGCATTGTAGAATTCAGAAT
rJMSF025E04- TGATATTGAACNCGCAT
rJMSF007K12- TGATATTGAACACGCATTGTAGAATTCAGAATGAACAAAGTAGGGAGCCCATGAACTCCA
rJMSF038E11- TGATATTGANCACGCNTTGTAGAATTCNGAATGANCAAAGTAGGGAGCCCATGAACTCCA
JMSF038E11+ TGATATTGAACACGCATTGTAGAATTCAGAATGAACAAAGTAGGGAGCCCATGAACTCCA
____________________________________________________________
consensus TGATATTGAACACGCATTGTAGAATTCAGAATGAACAAAGTAGGGAGCCCATGAACTCCA
. : . : . : . : . : . :
rJMSF007K12- TACTTTGAGAGAGTACTTGGCTT
rJMSF038E11- TACTTTGAGAGAGTACTTGGCTTTAATAGCTGACTCNTCNATTGCAAAGTGGGGAATTGA
JMSF038E11+ TACTTTGAGAGAGTACTTGGC-TTAATAGCTGACTCTTCAATTGCAAAGTGGGGAATTGA
____________________________________________________________
consensus TACTTTGAGAGAGTACTTGGCTTTAATAGCTGACTCTTCAATTGCAAAGTGGGGAATTGA
. : . : . : . : . : . :
rJMSF038E11- GGGG
JMSF038E11+ GGGGAACAGGGAAGACAGCACAGAAAAGATTGGTCTAAAAGTTATGGAGAATGGACACCA
____________________________________________________________
consensus GGGGAACAGGGAAGACAGCACAGAAAAGATTGGTCTAAAAGTTATGGAGAATGGACACCA
. : . : . : . : . : . :
JMSF038E11+ TGAGGCATAGAAGAGGAAAACAACATAGTTATGTGATCTTCGGTGAATCATATAAAGTGC
____________________________________________________________
consensus TGAGGCATAGAAGAGGAAAACAACATAGTTATGTGATCTTCGGTGAATCATATAAAGTGC
. : . : . : . : . : . :
JMSF038E11+ CCTCTGCAATGACATCTCATCTCCCTCAATTACAGCTGCGGCATATGAAGGTTTGATCTC
JMSF025E04+ CCTCAATTACAGCTGCGGCATATGAAGGTTTGATCTC
____________________________________________________________
consensus CCTCTGCAATGACATCTCATCTCCCTCAATTACAGCTGCGGCATATGAAGGTTTGATCTC
. : . : . : . : . : . :
JMSF038E11+ ATCCACTGGACATGTGAAATCTCGGAGGCCCAAGATCGAGTGTTCGACCGAATTCCGCAA
JMSF007F23+ CTGGACATGTGAAATCTCGGAGGCCCAAGATCGAGTGTTCGACCGAATTCCGCAA
JMSF007K12+ CTGGACATGTGAAATCTCGGAGGCCCAAGATCGAGTGTTCGACCGAATTCCGCAA
JMSF025E04+ ATCCACTGGACATGTGAAATCTCGGAGGCCCAAGATCGAGTGTTCGACCGAATTCCGCAA
____________________________________________________________
consensus ATCCACTGGACATGTGAAATCTCGGAGGCCCAAGATCGAGTGTTCGACCGAATTCCGCAA
. : . : . : . : . : . :
JMSF038E11+ GGGACAGACAGCGGCAGGCGAGGGCATGAGGTCCTGAGCGAAAGTTAGCCTCCCGATTAT
JMSF007F23+ GGGACAGACAGCGGCAGGCGAGGGCATGAGGTCCTGAGCGAAAGTTAGCCTCCCGATTAT
JMSF007K12+ GGGACAGACAGCGGCAGGCGAGGGCATGAGGTCCTGAGCGAAAGTTAGCCTCCCGATTAT
JMSF016C09+ TCCCGATTAT
JMSF025E04+ GGGACAGACAGCGGCAGGCGAGGGCATGAGGTCCTGAGCGAAAGTTAGCCTCCCGATTAT
____________________________________________________________
consensus GGGACAGACAGCGGCAGGCGAGGGCATGAGGTCCTGAGCGAAAGTTAGCCTCCCGATTAT
. : . : . : . : . : . :
JMSF038E11+ GGTCAACAGAGCAAATCCAGCTCCCAGATTCCTGAAACCCGCCATTCCAGAAATAGAACA
JMSF007F23+ GGTCAACAGAGCAAATCCAGCTCCCAGATTCCTGAAACCCGCCATTCCAGAAATAGAACA
JMSF007K12+ GGTCAACAGAGCAAATCCAGCTCCCAGATTCCTGAAACCCGCCATTCCAGAAATAGAACA
JMSF016C09+ GGTCAACAGAGCAAATCCAGCTCCCAGATTCCTGAAACCCGCCATTCCAGAAATAGAACA
JMSF025E04+ GGTCAACAGAGCAAATCCAGCTCCCAGATTCCTGAAACCCGCCATTCCAGAAATAGAACA
____________________________________________________________
consensus GGTCAACAGAGCAAATCCAGCTCCCAGATTCCTGAAACCCGCCATTCCAGAAATAGAACA
. : . : . : . : . : . :
JMSF038E11+ ATATGATTCGACAAGTAGCGCCCGCAGATAAGAAACGGAGCGGCAAAGCACAAACTAAAT
JMSF007F23+ ATATGATTCGACAAGTAGCGCCCGCAGATAAGAAACGGAGCGGCAAAGCACAACCTAAAT
JMSF007K12+ ATATGATTCGACAAGTAGCGCCCGCAGATAAGAAACGGAGCGGCAAAGCACAACCTAAAT
JMSF016C09+ ATATGATTCGACAAGTAGCGCCCGCAGATAAGAAACGGAGCGGCAAAGCACAACCTAAAT
JMSF025E04+ ATATGATTCGACAAGTAGCGCCCGCAGATAAGAAACGGAGCGGCAAAGCACAACCTAAAT
____________________________________________________________
consensus ATATGATTCGACAAGTAGCGCCCGCAGATAAGAAACGGAGCGGCAAAGCACAACCTAAAT
. : . : . : . : . : . :
JMSF038E11+ CGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGGAGGTAGCGGTGGCGGCAATGGCGGTGGT
JMSF007F23+ CGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGGAGGTAGCGGTGGCGGCAATGGCGGTGGT
JMSF007K12+ CGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGGAGGTAGCGGTGGCGGCAATGGCGGTGGT
JMSF016C09+ CGAAGAAGAAGAAGAAGAAGAAAAAGAGAAGGAGGTAGCGGTGGCGGCAATGGCGGTGGT
JMSF025E04+ CGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGGAGGTAGCGGTGGCGGCAATGGCGGTGGT
____________________________________________________________
consensus CGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGGAGGTAGCGGTGGCGGCAATGGCGGTGGT
. : . : . : . : . : . :
JMSF038E11+ TGTGGGAGTGGAGGTGACAGCGAGAGCCCAGCGCATCTTAGCGTTGAGGCTCAGATT
JMSF007F23+ TGTGGGAGTGGAGGTGACAGCGAGAGCCCAGCGCATCTTAGCGTTGAGGCTCAGATT
JMSF007K12+ TGTGGGAGTGGAGGTGACAGCGAGAGCCCAGCGCATCTTAGCGTTGAGGCTCAGATT
JMSF016C09+ TGTGGGAGTGGAGGTGACAGCGAGAGCCCAGCGCATCTTAGCGTTGAGGCTCAGATT
JMSF025E04+ TGTGGGAGTGGAGGTGACAGCGAGAGCCCAGCGCATCTTAGCGTTGAGGCTCAGATTGCC
____________________________________________________________
consensus TGTGGGAGTGGAGGTGACAGCGAGAGCCCAGCGCATCTTAGCGTTGAGGCTCAGATTGCC