| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN044F09 | Sequence | 546 | 009341 (9) | ref|XP_006341438.1| | 4e-74 | PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic-like [Solan | |||||
| JMSF001F20 | Sequence | 381 | 009341 (9) | ref|XP_009765128.1| | 2e-40 | PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic-like [Nicot | 753 | 009341 (9) | ref|XP_009604635.1| | 1e-114 | PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic [Nicotiana |
| JMSF008G06 | Sequence | 398 | 009341 (9) | ref|XP_009762796.1| | 8e-14 | PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic-like [Nicot | 737 | 009341 (9) | ref|XP_009604635.1| | 1e-112 | PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic [Nicotiana |
| JMSF025B06 | Sequence | 636 | 009341 (9) | ref|XP_009765128.1| | 1e-59 | PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic-like [Nicot | 750 | 009341 (9) | ref|XP_009604635.1| | 8e-118 | PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic [Nicotiana |
| JMSF025F20 | Sequence | 620 | 009341 (9) | ref|XP_009765128.1| | 3e-91 | PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic-like [Nicot | 721 | 009341 (9) | ref|XP_009604635.1| | 2e-109 | PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic [Nicotiana |
This contig is upended
. : . : . : . : . : . :
rJMSF001F20- TTGATC
____________________________________________________________
consensus TTGATC
. : . : . : . : . : . :
rJMSF008G06- GGAGAATTCATAGTTTCATACTACATTTATAAAAATT
rJMSF025F20- GGAGAATTCATAGTTTCATACTACATTTATAAAAATT
rJMSF001F20- TGACACAGGTTTACAGCATCACTGGAGAATTCATAGTTTCATACTACATTTATAAAAATT
rJMSF025B06- TTTCATACTACATTTATAAAAATT
____________________________________________________________
consensus TGACACAGGTTTACAGCATCACTGGAGAATTCATAGTTTCATACTACATTTATAAAAATT
. : . : . : . : . : . :
rJMSF008G06- CAT-GTAGATGTTCAAATGGAGCTTGAAATGAACATGAACTTAATCAACTTATACAGTAA
rJMSF025F20- CAT-GTAGATGTTCAAATGGAGCTTGAAATGAACATGAACTTAATCAACTTATACGGTAN
rJMSF001F20- CAT-GTAGATGTTCAAATGGAGCTTGAAATGAACATGAACTTAATCAACTTATACAGTAA
rJMSF025B06- CATGGTAGATGTTCAAATGGAGCTTGAAATGAACATGAACTTAATCAACTTATACAGTAA
____________________________________________________________
consensus CAT-GTAGATGTTCAAATGGAGCTTGAAATGAACATGAACTTAATCAACTTATACAGTAA
. : . : . : . : . : . :
rJMSF008G06- ACACCATATGTTAGACATGAATAGAGGCTGCCAGTGCCAGTTTGCATCATTAGCCAACAT
rJMSF025F20- ACACCATATGTTAGACATGAATAGAGGCTGCCAGTGCCAGTTTGCATCATTAGCCAACAT
rJMSF001F20- ACACCATATGTTAGACATGAATAGAGGCTGCCAGTGCCAGTTTGCATCATTAGCCAACAT
rJMSF025B06- ACACCATATGTTAGACATGAATAGAGGCTGCCAGTGCCAGTTTGCATCATTAGCCAACAT
____________________________________________________________
consensus ACACCATATGTTAGACATGAATAGAGGCTGCCAGTGCCAGTTTGCATCATTAGCCAACAT
. : . : . : . : . : . :
rJMSF008G06- GTTACTTTGTAATCTTGCACTCAAAAGCTTGCTTCCTCTGTGGTCGGTCTTCTCAAGAAA
rJMSF025F20- GTTACTTTGTAATCTTGCACTCAAAAGCTTGCTTCCTCTGTGGTCGGTCTTCNCAAGAAA
rJMSF001F20- GTTACTTTGTAATCTTGCACTCAAAAGCTTGCTTCCTCTGTGGTCGGTCTTCTCAAGAAA
rJMSF025B06- GTTACTTTGTAATCTTGCACTCAAAAGCTTGCTTCCTCTGTGGTCGGTCTTCTCAAGAAA
____________________________________________________________
consensus GTTACTTTGTAATCTTGCACTCAAAAGCTTGCTTCCTCTGTGGTCGGTCTTCTCAAGAAA
. : . : . : . : . : . :
rJMSF008G06- TACCGGAGGCTATTTTCAAGAACCTGTTGAAGGGGCTTAATGAGAGCTTTGCCCTTGTAG
rJMSF025F20- TACCGGAGGCTATTTTCAAGAACCTGTTGAAGGGGCTTAATGAGAGCTTTGCCCTTGTAG
rJMSF001F20- TACCGGAGGCTATTTTCAAGAACCTGTTGAAGGGGCTTAATGAGAGCTTTGCCCTTGTAG
rJMSF025B06- TACCGGAGGCTATTTTCAAGAACCTGTTGAAGGGGCTTAATGAGAGCTTTGCCCTTGTAG
____________________________________________________________
consensus TACCGGAGGCTATTTTCAAGAACCTGTTGAAGGGGCTTAATGAGAGCTTTGCCCTTGTAG
. : . : . : . : . : . :
rJMSF008G06- CTGACATGAAATTTCGCCTTAGCGAGCAATCCCTCGGTGTCAAATTCTCCCGATTCAACA
rJMSF025F20- CTGACATGAAATTTCGCCTTAGCGAGCAATCCCTCGGTGTCAAATTCTCCCGATTCNACA
rJMSF001F20- CTGACATGAAATTTCGCCTTAGCGAGCAATCCCTCGGTGTCAAATTCTCCCGATTCAACA
rJMSF025B06- CTGACATGAAATTTCGCCTTAGCGAGCAATCCCTCGGTGTCAAATTCTCCCGATTCAACA
____________________________________________________________
consensus CTGACATGAAATTTCGCCTTAGCGAGCAATCCCTCGGTGTCAAATTCTCCCGATTCAACA
. : . : . : . : . : . :
rJMSF008G06- TCAACATTTATGTCAGCAATGGCCTTTACAAGATCAACTATTAATCCAGGTCTATCCACT
rJMSF025F20- TCAACATTTATGTCAGCAATGGCCTTTACAAGATCAACTATTAATCCAGGTCTATCCACT
rJMSF001F20- TCAACATTTATGTCAGCAATGGCCTTTACAAGATCAACTATTAATCCAGGTCTATCCACT
rJMSF025B06- TCAACATTTATGTCAGCAATGGCCTTTACAAGATCAACTATTAATCCAGGTCTATCCACT
____________________________________________________________
consensus TCAACATTTATGTCAGCAATGGCCTTTACAAGATCAACTATTAATCCAGGTCTATCCACT
. : . : . : . : . : . :
rJMSF008G06- GTCTCTACACAGAGTAAGCTCCGTTCAGGACTGTCATTGTAGACATGAACATGGGTCGCT
rJMSF025F20- GTCTCTACACAGAGTAAGCTCCGTTCAGGACTGTCATTGTAGACATGAACATGGGTCGCT
rJMSF001F20- GTCTCTACACAGAGTAAGCTCCGTTCAGGACTGTCATTGTAGACATGAACATGGGTCGCT
rJMSF025B06- GTCTCTACACAGAGTAAGCTCCGTTCAGGACTGTCATTGTAGACATGAACATGGGTCGCT
____________________________________________________________
consensus GTCTCTACACAGAGTAAGCTCCGTTCAGGACTGTCATTGTAGACATGAACATGGGTCGCT
. : . : . : . : . : . :
rJMSF008G06- ATGTCCACATCAACCTTATGATGTGGTTGAAGAACACCAAAAGCTTCCCCCATAGCTAAC
rJMSF025F20- ATGTCCACATCAACCTTATGATGTGGTTGAAGAACACCAAAAGCTTCCCCCATAGCTAAC
rJMSF001F20- ATGTCCACATCAACCTTATGATGTGGTTGAAGAACACCAAAAGCTTCCCCCATAGCTAAC
rJMSF025B06- ATGTCCACATCAACCTTATGATGTGGTTGAAGAACACCAAAAGCTTCCCCCATAGCTAAC
JMFN044F09+ CCAAAAGCTTCCCCCATAGTTACC
JMSF025F20+ TCCACATCAACCTTATGATGTGGTTGAAGAACACCAAAAGCTTCCCCCATAGCTAAC
____________________________________________________________
consensus ATGTCCACATCAACCTTATGATGTGGTTGAAGAACACCAAAAGCTTCCCCCATAGCTAAC
. : . : . : . : . : . :
rJMSF008G06- TGAGAACTCGACTCCGGGTGGTACTCAAGCATATTGTTAATAATTGTCAAACGAATTGCC
rJMSF025F20- TGAGAACTCGACTCCGGGTGGTACTCANGCATATTGTTAATAATTGTCAAACGAATTGCC
rJMSF001F20- TGAGAACTCGACTCCGGGTGGTACTCAAGCATATTGTTAATAATTGTCAAACGAATTGCC
rJMSF025B06- TGAGAACTCGACTCCGGGTGGTACTCAAGCATATTGTTAATAATTGTCAAACGAATTGCC
JMFN044F09+ TGAGAACTCGACTCCGGGTGGTATTCAAGCATATTGCTAATAATTGTCAAATGAATTGCC
JMSF025F20+ TGAGAACTCGACTCCGGGTGGTACTCAAGCATATNGTTAATAATTGTCAAACGAATTGCC
____________________________________________________________
consensus TGAGAACTCGACTCCGGGTGGTACTCAAGCATATTGTTAATAATTGTCAAACGAATTGCC
. : . : . : . : . : . :
rJMSF008G06- TCGAGCAACTCGGGATCCTCAATTTTCTTACCTGTAGAAGCTTTGGTAATGGCAAACTTG
rJMSF025F20- TCGAGCAACTCGGGATCCTCAATTTTCTTACCTGNANAAGCTTTGGTAATGGCAAACTTG
rJMSF001F20- TCGAGCAACTCGGGATCCTCAATTTTCTTACCTGTAGAAGCTTTGGTAATGGCAAACTTG
rJMSF025B06- TCGAGCAACTCGGGATCCTCAATTTTCTTACCTGTAGAAGCTTTGGTAATGGCAAACTTG
JMFN044F09+ TCGAGCAACTCGGGATCCTCAATTTTTCTACCTGTAGAAGCTTTGGTAATGGCAAGCTTG
JMSF025F20+ TCGAGCAACTCGGGATCCTCAATTTTCTTACCTGTAGAAGCTTTGGTAATGGCAAACTTG
JMSF025B06+ TTCTTACCTGTAGAAGCTTTGGTAATGGCAAACTTG
____________________________________________________________
consensus TCGAGCAACTCGGGATCCTCAATTTTCTTACCTGTAGAAGCTTTGGTAATGGCAAACTTG
. : . : . : . : . : . :
rJMSF008G06- TTGTGCTTCCCGGATGAATCAAGATAAACATTTGCCTTGGCAACGTTCAGCCCAAGATTT
rJMSF025F20- TTGTGCTTCCCGGATGAATCAAGATAAACATTTGCCTTGGCAACGTTCAGCCCAAGATTT
rJMSF001F20- TTGTGCTTCCCGGATGAATCAAGATAAACATTTGCCTTGGCAACGTTCAGCCCAAGATTT
rJMSF025B06- TTGTGCTTCCCGGATGAATCAAGATAAACATTTGCCTTGGCAACGTTCAGCCCAAGATTT
JMFN044F09+ TGGTGCTTCCCGGATGAATCAAGATAAACATTTGCTTTGCCAACGTTCAGCCCAAGATTT
JMSF025F20+ TTGTGCTTCCCGGATGAATCAAGATAAACATTTGCCTTGGCAACGTTCAGCCCAAGATTT
JMSF001F20+ TTT
JMSF025B06+ TTGTGCTTCCCGGATGAATCAAGATAAACATTTGCCTTGGCAACGTTCAGCCCAAGATTT
____________________________________________________________
consensus TTGTGCTTCCCGGATGAATCAAGATAAACATTTGCCTTGGCAACGTTCAGCCCAAGATTT
. : . : . : . : . : . :
rJMSF008G06- TTCAGTGCATTCATCGTAT
rJMSF025F20- TTCAGTGCATTCATCGTA
rJMSF001F20- TTCAGTGCATTCATCGTATCAAGAAGTG
rJMSF025B06- TTCAGTGCATTCATCGTATCAAGAAGTGCCCCANGGCGATCC
JMFN044F09+ TTCAGTGCATTCATAGTATCAAGAAGTGCCCCAAGGCGATCCCCGAAGGTGCCCTCAAGT
JMSF025F20+ TTCAGTGCNTTCATCGTATCAAGAAGTGCCCCAAGGCGATCCCCGAAGGTGACCTCAACT
JMSF001F20+ TTCAGTGCATTCATCGTATCAAGAAGTGCCCCAAGGCGATCCCCGAAGGTGACCTCAACT
JMSF025B06+ TTCAGTGCATTCATCGTATCAAGAAGTGCCCCAAGGCGATCCCCGAAGGTGACCTCAACT
____________________________________________________________
consensus TTCAGTGCATTCATCGTATCAAGAAGTGCCCCAAGGCGATCCCCGAAGGTGACCTCAACT
. : . : . : . : . : . :
JMFN044F09+ ACAGTTGCATCTGGATCTGATTCCAGTTCTAGTATCACTTTGGGAGCTGGTATTTATGCA
JMSF025F20+ ACAGTTGCATCTGGATCTGAATCCAGATCTAGTATCACTTTGGGAGTTGGTATTTCTGCA
JMSF001F20+ ACAGTTGCATCTGGATCTGAATCCAGATCTAGTATCACTTTGGGAGTTGGTATTTCTGCA
JMSF025B06+ ACAGTTGCATCTGGATCTGAATCCAGATCTAGTATCACTTTGGGAGTTGGTATTTCTGCA
____________________________________________________________
consensus ACAGTTGCATCTGGATCTGAATCCAGATCTAGTATCACTTTGGGAGTTGGTATTTCTGCA
. : . : . : . : . : . :
JMFN044F09+ GTCTCGGAGCAATTTTGGTCCTCGTCAGTAGCTGATGATGCTTTCGGAACGATTGTACTT
JMSF025F20+ GTCTCGGAGAAACTCTTGTCCTCGACAGTAGCTGATGATGCTTTCGGAACGATTGTACTT
JMSF008G06+ TTGTCCTCGACAGTAGCTGATGATGCTTTCGGAACGATTGTACTT
JMSF001F20+ GTCTCGGAGAAACTCTTGTCCTCGACAGTAGCTGATGATGCTTTCGGAACGATTGTACTT
JMSF025B06+ GTCTCGGAGAAACTCTTGTCCTCGACAGTAGCTGATGATGCTTTCGGAACGATTGTACTT
____________________________________________________________
consensus GTCTCGGAGAAACTCTTGTCCTCGACAGTAGCTGATGATGCTTTCGGAACGATTGTACTT
. : . : . : . : . : . :
JMFN044F09+ GCATTAAATCCTCACCTATTAGGAAGAATGCAGATTGTGCGAAATGGATCCATAGCAAAA
JMSF025F20+ GCATTAAATCCTAACCTATTAGGAAGAATGCAGATTCTGCGAAATGGATCCATAGCAAAA
JMSF008G06+ GCATTAAATCCTAACCTATTAGGAAGAATGCAGATTCTGCGAAATCGATCCATAGCAAAA
JMSF001F20+ GCATTAAATCCTAACCTATTAGGAAGAATGCAGATTCTGCGAAATGGATCCATAGCAAAA
JMSF025B06+ GCATTAAATCCTAACCTATTAGGAAGAATGCAGATTCTGCGAAATGGATCCATAGCAAAA
____________________________________________________________
consensus GCATTAAATCCTAACCTATTAGGAAGAATGCAGATTCTGCGAAATGGATCCATAGCAAAA
. : . : . : . : . : . :
JMFN044F09+ GAGCAGCTGAAAGCCCCATGACTAGAAAATGGTTGGTTATCAATTACTTTCACGCCACTG
JMSF025F20+ GAGCAGCTGAAAGCACCATGACTAGAAAATGGTTGCTTCTCAATTACTCTCACGCCACTG
JMSF008G06+ GAGCAGCTGAAAGCACCATGACTAGAAAATGGTTGCTTCTCAATTACTCTCACGCCACTG
JMSF001F20+ GAGCAGCTGAAAGCACCATGACTAGAAAATGGTTGCTTCTCAATTACTCTCACGCCACTG
JMSF025B06+ GAGCAGCTGAAAGCACCATGACTAGAAAATGGTTGCTTCTCAATTACTCTCACGCCACTG
____________________________________________________________
consensus GAGCAGCTGAAAGCACCATGACTAGAAAATGGTTGCTTCTCAATTACTCTCACGCCACTG
. : . : . : . : . : . :
JMFN044F09+ CAAAGCCCAGAAAAACGCCCGCAAGAAGCCATCACTATAG
JMSF025F20+ CAAAGCCCAGAAAAACGCCCACAAGAAGCCATAACTATAGACATTCCTTAAGGAAAAAGG
JMSF008G06+ CAAAGCCCAGAAAAACGCCCACAAGAAGCCATAACTATAGACATTCCTTAAGGAAAAAGG
JMSF001F20+ CAAAGCCCAGAAAAACGCCCACAAGAAGCCATAACTATAGACATTCCTTAAGGAAAAAGG
JMSF025B06+ CAAAGCCCAGAAAAACGCCCACAAGAAGCCATAACTATAGACATTCCTTAAGGAAAAAGG
____________________________________________________________
consensus CAAAGCCCAGAAAAACGCCCACAAGAAGCCATAACTATAGACATTCCTTAAGGAAAAAGG
. : . : . : . : . : . :
JMSF025F20+ ATAATAATAATAATAA
JMSF008G06+ ATAATAATAATAATAATAGTCTGCAAGAACTAGGGGCTTGAAGATATTTATGTCCTTGGT
JMSF001F20+ ATAATAATAATAATAA
JMSF025B06+ ATAATAATAATAATAATAGTCTGCAAGAACTAGGGGCTTGAAGATATTTATGTCCTTGGT
____________________________________________________________
consensus ATAATAATAATAATAATAGTCTGCAAGAACTAGGGGCTTGAAGATATTTATGTCCTTGGT
. : . : . : . : . : . :
JMSF008G06+ TTTGTTGGTATTAGAGGAAGGAGCTGAGGATATGGGTTTTGTGGGGACTAGAGAAGAACC
JMSF025B06+ TTTGTTGGTATTAGAGGAAGGAGCTGAGGATATGGGTTTTGTGGGGACTAGAGAAGAACC
____________________________________________________________
consensus TTTGTTGGTATTAGAGGAAGGAGCTGAGGATATGGGTTTTGTGGGGACTAGAGAAGAACC
. : . : . : . : . : . :
JMSF008G06+ ATCTTGTTTCAAGCCAAGTACAAGTTATGGTGGTTTTGCTTGTTGTAGAACT
JMSF025B06+ ATCTTGTTTCAAGCCAAGTACAAGTTATGGTGGTTTTGCTTGTTGTAGAACTAGAATACC
____________________________________________________________
consensus ATCTTGTTTCAAGCCAAGTACAAGTTATGGTGGTTTTGCTTGTTGTAGAACTAGAATACC