Contig 009340:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051P04Sequence505009340 (3)ref|XP_009371612.1|2e-17PREDICTED: U-box domain-containing protein 5-like [Pyrus x bretschneideri] ref|X637024438
JMSF025A21Sequence535009340 (3)ref|XP_008241693.1|3e-07PREDICTED: U-box domain-containing protein 5-like isoform X2 [Prunus mume]728002938 (2)ref|XP_008338347.1|2e-46PREDICTED: U-box domain-containing protein 5-like [Malus domestica] ref|XP_00833
JMSF037P05Sequence650009340 (3)emb|CDP02009.1|3e-40unnamed protein product [Coffea canephora]666002938 (2)ref|XP_010095253.1|4e-42U-box domain-containing protein 5 [Morus notabilis] gb|EXB59099.1| U-box domain-

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037P05+                                                   CTCTGCAGCCAGCAATACGG
                      ____________________________________________________________
consensus                                                     CTCTGCAGCCAGCAATACGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037P05+           GAACCATGTTTTGAATCTGGCTCAAGCTAACCTCCAGTAAGCTCCACGACTTTTGACACC
                      ____________________________________________________________
consensus             GAACCATGTTTTGAATCTGGCTCAAGCTAACCTCCAGTAAGCTCCACGACTTTTGACACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF051P04+                              TTTCAGAGCCAAGTAGAGTTTACTTGATTCACTGCACGGCT
JMSF037P05+           TCGAGAGTATAACATCTCCTTTCAGAGCCAAGTAGAGTTTACTTGATTCACTGCACTGCT
                      ____________________________________________________________
consensus             TCGAGAGTATAACATCTCCTTTCAGAGCCAAGTAGAGTTTACTTGATTCACTGCACTGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF051P04+           TAAGTATTAACTTCGCCTTCTCAATGGCTTTGTTCAATAAGCAAAGCGCCTCTATCCCTG
JMSF037P05+           TAAGTATTAACTTCGCCTTCTCAATGGCTTTGTTCAATAAGCAAAGCGCCTCTATCCCTG
                      ____________________________________________________________
consensus             TAAGTATTAACTTCGCCTTCTCAATGGCTTTGTTCAATAAGCAAAGCGCCTCTATCCCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF051P04+           ATCTGCATCGAGGCCGGGATGCTTCTATTCGCTGGAAGTATTTTTGAAGCTCTACTTACT
JMSF037P05+           ATCTGCATCGAGGCCGGGATGCTTCTA-TCGCTGGAAGTATTTTTGAAGCTCTACTTACT
JMSF025A21+               GCATCGAGGCCGGGATGCTTCTA-TCGCTGGAAGTATTTTTGAAGCTCTACTTACT
                      ____________________________________________________________
consensus             ATCTGCATCGAGGCCGGGATGCTTCTA-TCGCTGGAAGTATTTTTGAAGCTCTACTTACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF051P04+           GAGTTGATTAATTCTGTGCACATTAACCGATGCACCTTAATGGAGTTAGGAGTTGGAAGT
JMSF037P05+           GAGTTGATTAATTCTGTGCACATTAACCGATGCACCTTAATGGAGTTAGGAGTTGGAAGT
JMSF025A21+           GAGTTGATTAATTCTGTGCACATTAACTGATGCACCTTAATGGAGTTAGGAGTTGGAAGT
                      ____________________________________________________________
consensus             GAGTTGATTAATTCTGTGCACATTAACCGATGCACCTTAATGGAGTTAGGAGTTGGAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF051P04+           GCTTCAGTAACAACTGTCTTCATACTCAAAGGAAATGGAAACGGAAGAACAGATAACTTA
JMSF037P05+           GCTTCAGTAACAACTGTCTTCATACTCAAAGGAAATGGAAACAGAAGAACAGATAACTTA
JMSF025A21+           GCTTCAGTAACAACTGTCTTCATACTCAAAGGAAATGGAAACAGAAGAACAGATAACTTA
                      ____________________________________________________________
consensus             GCTTCAGTAACAACTGTCTTCATACTCAAAGGAAATGGAAACAGAAGAACAGATAACTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF051P04+           TCT                                                         
JMSF037P05+           TCTAGCAAAAAGGTAGAGTTATCAAGACCACCAAATAACTACACTTCTGGAAACAGAAAC
JMSF025A21+           TCTAGCAAAAAGGTAGAGTTATCAAGACCACCAAATAACTACACTTCTGGAAACAGAAAC
                      ____________________________________________________________
consensus             TCTAGCAAAAAGGTAGAGTTATCAAGACCACCAAATAACTACACTTCTGGAAACAGAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037P05+           CCAAACCCAATGGCCAATTCCCTTCTGGAACCACACCCACCTTGAAAAGCTGCAAGCTTT
JMSF025A21+           CCAAACCCAATGGCCAATTCCCTTCTGGAACCACACCCACCTTGAAAAGCTGCAAGCTTT
                      ____________________________________________________________
consensus             CCAAACCCAATGGCCAATTCCCTTCTGGAACCACACCCACCTTGAAAAGCTGCAAGCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037P05+           CCAGCAAACTTGAATAGAATATTACAAATGACAACTTTCAAGAAAAGCTCCTCCTTCTTC
JMSF025A21+           CCAGCAAACTTGAATAGAATATTACAAATGACAACTTTCAAGAAAAGCTCCTCCTTCTTC
                      ____________________________________________________________
consensus             CCAGCAAACTTGAATAGAATATTACAAATGACAACTTTCAAGAAAAGCTCCTCCTTCTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037P05+           TTCTTCTTCTTCTTTTCTTTTCCGAACAAAGGAACCCGATTCTGAACTGAGATTACAATT
JMSF025A21+           TTCTTCTTCTTCTTTTCTTTTCCGAACAAAGGAACCCGATTCTGAACTGAGATTACAATT
                      ____________________________________________________________
consensus             TTCTTCTTCTTCTTTTCTTTTCCGAACAAAGGAACCCGATTCTGAACTGAGATTACAATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037P05+           TCAAACACAAATCAACCTTATTGAGACCA                               
JMSF025A21+           TCAAACACAAATCAACCTTATTGAGACCACAGAAGACCAAGGAATGATGGATGCACGCAC
                      ____________________________________________________________
consensus             TCAAACACAAATCAACCTTATTGAGACCACAGAAGACCAAGGAATGATGGATGCACGCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF025A21+           AAATGTACAAGCATTTACAAACAGCATTAAAGAGATACCTAACCACCCAGTCACATCTTC
                      ____________________________________________________________
consensus             AAATGTACAAGCATTTACAAACAGCATTAAAGAGATACCTAACCACCCAGTCACATCTTC