Contig 009339:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN015I15+                               ACGGAACAAATTCTTCAATTTCTTTCCACTAGAGAATAGA
                      ____________________________________________________________
consensus                                 ACGGAACAAATTCTTCAATTTCTTTCCACTAGAGAATAGA
 
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JMFN015I15+           GATTTAGCAAAAGTACAATTGGGCATACACTCATTATATCACCTATATATGTATATATAT
                      ____________________________________________________________
consensus             GATTTAGCAAAAGTACAATTGGGCATACACTCATTATATCACCTATATATGTATATATAT
 
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JMFN015I15+           AAATGGAAAACTTCACAGCACAGCAATTAACAGTGAAATCCTACTAATCTTACTATAGAA
rJMSF024P23-                         CAGCACAGCAATTAACAGTGAAATCCTACTAATCTTACTATAGAA
                      ____________________________________________________________
consensus             AAATGGAAAACTTCACAGCACAGCAATTAACAGTGAAATCCTACTAATCTTACTATAGAA
 
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JMFN015I15+           AAATTCCCTAATGCTACTAACTAGCTACCCAGAAAAATAGAACGAAGCCCTCACAATCTT
rJMSF024P23-          AAATTCCCTAATGCTACTAACTAGCTACCCAGAAAAATAGAACGAAGCCCTCACAATCTT
                      ____________________________________________________________
consensus             AAATTCCCTAATGCTACTAACTAGCTACCCAGAAAAATAGAACGAAGCCCTCACAATCTT
 
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JMFN015I15+           AATTCACTGATTCAGTAGGCAGTATTTGGGAGACGAAAAATAGAACGAAATCGAATCAGA
rJMSF024P23-          AATTCACTGATTCAGTAGGCAGTATTTGGGAGAAGAAAAATAGAACGAAATCGAATCAGA
                      ____________________________________________________________
consensus             AATTCACTGATTCAGTAGGCAGTATTTGGGAGACGAAAAATAGAACGAAATCGAATCAGA
 
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JMFN015I15+           AGACACCAATGTTATGCCTCGCCGGCCCCTGTATATTCTGGTCGAGTTTGCGCTTCAATC
rJMSF025P23-                                CGGCCCCTGTATATTCTGGTCGAGTTTGCGCTTCAATC
rJMSF024P23-          AGACACCAATGTTATGCCTCGCCGGCCCCTGTATATTCTGGTCGAGTTTGCGCTTCAATC
                      ____________________________________________________________
consensus             AGACACCAATGTTATGCCTCGCCGGCCCCTGTATATTCTGGTCGAGTTTGCGCTTCAATC
 
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JMFN015I15+           GCCCTATGCATTCTGCTATTCCTGATTATTAGAATTTTGGCCATGTATCCTGGTTGGTTT
rJMSF025P23-          GCCCTATGCATTCTGCTATTCCTGATTATTAGAATTTTGGCCATGTATCCTGGTTGGTTT
rJMSF024P23-          GCCCTATGCATTCTGCTATTCCTGATTATTAGAATTTTGGCCATGTATCCTGGTTGGTTT
JMSF024P23+                                                TGGCCATGTATCCTGGTTGGTTT
                      ____________________________________________________________
consensus             GCCCTATGCATTCTGCTATTCCTGATTATTAGAATTTTGGCCATGTATCCTGGTTGGTTT
 
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JMFN015I15+           CATATTCAAATCGATCATTTTATTCTCCCTCTTGGCATGACCATCTTTAGTGTTATCTGA
rJMSF025P23-          CATATTCAAATCGATCATTTTATTCTCCCTCTTGGCATGACCATCTTTAGTGTTATCTGA
rJMSF024P23-          CATATTCAAATCGATCATTTTATTCTCCCTCTTGGCATGACCATCTTTAGTGTTATCTGA
JMSF024P23+           CATATTCAAATCGATCATTTTATTCTCCCTCTTGGCATGACCATCTTTAGTGTTATCTGA
                      ____________________________________________________________
consensus             CATATTCAAATCGATCATTTTATTCTCCCTCTTGGCATGACCATCTTTAGTGTTATCTGA
 
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JMFN015I15+           AACCGGAACAGCGGCGGCGGCGGCGTGGTTCTGTTGGCCGGGATCTGAGGTCAGCCGCGG
rJMSF025P23-          AACCGGAACAGCGGCGGCGGCGGCGTGGTTCTGTTGGCCGGGATCTGAGGTCAGCCGCGG
rJMSF024P23-          AACCGGAACAGCGGCGGCGGCGGCGTGGTTCTGTTGGCCGGGATCTGAGGTCAGCCGCGG
JMSF024P23+           AACCGGAACAGCGGCGGCGGCGGCGTGGTTCTGTTGGCCGGGATCTGAGGTCAGCCGCGG
                      ____________________________________________________________
consensus             AACCGGAACAGCGGCGGCGGCGGCGTGGTTCTGTTGGCCGGGATCTGAGGTCAGCCGCGG
 
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JMFN015I15+           CGGCTCCTCC                                                  
rJMSF025P23-          CGGCTCCTCCGTCTGCCCAGCTTTATCTCCCGGGAACTCAACTCTCTGCCTCATCAGAAG
rJMSF024P23-          CGGCTCCTCCGTCTGCCCAGCTTTATCTCCCGGGAACTCAACTCTCTGCCTCATCAGAAG
JMSF024P23+           CGGCTCCTCCGTCTGCCCAGCTTTATCTCCCGGGAACTCAACTCTCTGCCTCATCAGAAG
                      ____________________________________________________________
consensus             CGGCTCCTCCGTCTGCCCAGCTTTATCTCCCGGGAACTCAACTCTCTGCCTCATCAGAAG
 
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rJMSF025P23-          ATATCTACTATGGGTTCTTTTGCCCCCAACATGCACAATCATATCACATTGCAGACACAG
rJMSF024P23-          ATATCTACTATGGGTTCTTTTGCCCCCAACATGCACAATCATATCACATTGCAGACACAG
JMSF024P23+           ATATCTACTATGGGTTCTTTTGCCCCCAACATGCACAATCATATCACATTGCAGACACAG
                      ____________________________________________________________
consensus             ATATCTACTATGGGTTCTTTTGCCCCCAACATGCACAATCATATCACATTGCAGACACAG
 
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rJMSF025P23-          AGAACTCCCATCCACCTCACAGTAAAAAAAAGCAGGCGCATTTTCACAAATATCGCANCG
rJMSF024P23-          AGAACTCCCATCCACCTCACAGTAAAAAAAAGCAGGTGCATTTTCACAAATATCGCAGCG
JMSF024P23+           AGAACTCCCATCCACCTCACAGTAAAAAAAAGCAGGTGCATTTTCACAAATATCGCAGCG
                      ____________________________________________________________
consensus             AGAACTCCCATCCACCTCACAGTAAAAAAAAGCAGGTGCATTTTCACAAATATCGCAGCG
 
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rJMSF025P23-          AGGAACAACAATCGGCGGATTAGCTAACCCAACTCTTACATGTCTACTTGCAAGCTTATT
rJMSF024P23-          AGGAACAACAATCGGCGGATTAGCTAACCCAACTCTTACATGTCTACTTGCAAGCTTATT
JMSF024P23+           AGGAACAACAATCGGCGGATTAGCTAACCCAACTCTTACATGTCTACTTGCAAGCTTATT
                      ____________________________________________________________
consensus             AGGAACAACAATCGGCGGATTAGCTAACCCAACTCTTACATGTCTACTTGCAAGCTTATT
 
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rJMSF025P23-          ACACATATGTACCTTATCATCGCAGGCGCGGCAAAGGGCGGCCTCATCGGCGGC      
rJMSF024P23-          ACACATATGTACCTTATCATCGCAGGCGCGGCAAAGGGCGGCCTCATCGGCGGCGCANAA
JMSF024P23+           ACACATATGTACCTTATCATCGCAGGCGCGGCAAAGGGCGGCCTCATCGGCGGCGCAGAA
                      ____________________________________________________________
consensus             ACACATATGTACCTTATCATCGCAGGCGCGGCAAAGGGCGGCCTCATCGGCGGCGCAGAA
 
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rJMSF024P23-          CAGAATGGCGGCGGCACTTTCACACACGTCACAAAGCGTCCGCATACTTCATCTCTC   
JMSF024P23+           CAGAATGGCGGCGGCACTTTCACACACGTCACAAAGCGTCCGCATACTTCATCTCTCCGA
                      ____________________________________________________________
consensus             CAGAATGGCGGCGGCACTTTCACACACGTCACAAAGCGTCCGCATACTTCATCTCTCCGA
 
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JMSF024P23+           TCATCCAACCCAAAAGTTTCTGAGTTTTCTCTTCTGGTTTTTGTGCCCTGCGACTGGAAG
                      ____________________________________________________________
consensus             TCATCCAACCCAAAAGTTTCTGAGTTTTCTCTTCTGGTTTTTGTGCCCTGCGACTGGAAG
 
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JMSF024P23+           GTTTAAAAGAAAATCAAATTGAAGAAGAAGAAGAGAGGAGACAAGGAAAAATGTTAGTTC
                      ____________________________________________________________
consensus             GTTTAAAAGAAAATCAAATTGAAGAAGAAGAAGAGAGGAGACAAGGAAAAATGTTAGTTC