Contig 009337:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003I24Sequence273009337 (3)gb|AFK39154.1|3e-18unknown [Lotus japonicus]532007130 (3)ref|XP_011008292.1|3e-26PREDICTED: anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase-like [Populus
JMSF024O05Sequence660009337 (3)ref|XP_006354953.1|4e-50PREDICTED: anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase-like [Solanum 672007130 (3)ref|XP_004236775.1|3e-43PREDICTED: anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase isoform X3 [So
JMSF026L12Sequence675009337 (3)ref|XP_006354953.1|2e-50PREDICTED: anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase-like [Solanum 751007130 (3)ref|XP_004236775.1|9e-52PREDICTED: anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase isoform X3 [So

Alignment

This contig is upended


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JMSF026L12+                                                  GATCAAACACCTTCATCCTGT
                      ____________________________________________________________
consensus                                                    GATCAAACACCTTCATCCTGT
 
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JMSF026L12+           TGGTAGGTGCATTAGCGAAACGTGAAACNTGATACGCTTCCTGTTCTCGCAACACAACCT
JMSF024O05+           TGGTAGGTGCATTAGCGAAACGTGAAACNTGATATGCTTCATGTTCTCGCAAGACAACCT
                      ____________________________________________________________
consensus             TGGTAGGTGCATTAGCGAAACGTGAAACNTGATATGCTTCCTGTTCTCGCAAGACAACCT
 
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JMSF026L12+           TGGAATCAGAAGGGAAACCCGGCGGCGCCTCCATTAAATCAGCAGCCGTTACGGCCCTGC
JMSF024O05+           TGGAATCAGAAGGGAAACCCGGCGGCGCCTCCATTAAATCAGCAGCCGTTACGGCCCTGC
                      ____________________________________________________________
consensus             TGGAATCAGAAGGGAAACCCGGCGGCGCCTCCATTAAATCAGCAGCCGTTACGGCCCTGC
 
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JMSF026L12+           CTTTGCCTTTGATAGCCCACATGAGTAGGCACAGTGCTGATACGGTAGGACTAACAACTG
JMSF024O05+           CTTTGCCTTTGATAGCCCACATGAGTAGGGACAGTGCTGATACGGTAGGACTAACAACTG
                      ____________________________________________________________
consensus             CTTTGCCTTTGATAGCCCACATGAGTAGGGACAGTGCTGATACGGTAGGACTAACAACTG
 
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JMSF026L12+           TGAACCACACAGTTTTGCATCCCATCTCTAATACCAAATCTGGGATCCAATAAGCATGGT
JMSF024O05+           AGAATCGCACAGTTTTGCATCCCATCTCTAATACCAATTCTGGGATCCAATAAGCATGGT
                      ____________________________________________________________
consensus             TGAATCGCACAGTTTTGCATCCCATCTCTAATACCAATTCTGGGATCCAATAAGCATGGT
 
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JMSF026L12+           CATACAACACAAGATTGGGCTTTTCCATCTGAAGAAGAATGCTTTTCACCTCATCCTGCA
JMSF024O05+           CATACAACACAAGATTGGGCTTTTCCATGTGAAGAAGAATGCTTTTCACCTCATCCTGCA
                      ____________________________________________________________
consensus             CATACAACACAAGATTGGGCTTTTCCATGTGAAGAAGAATGCTTTTCACCTCATCCTGCA
 
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JMSF026L12+           ACCCATCAAAGGCTAATGTTAGTGAACCATCAAGATTGTTTGT------ATCAGCTGTGG
JMSF024O05+           ATCCATCGAAGGCTACTTCCAGTGAACCATCAAGACTGTTCCTTCTATCATCAGCTGTGG
                      ____________________________________________________________
consensus             ATCCATCGAAGGCTACTTTTAGTGAACCATCAAGATTGTTTGTTCTATCATCAGCTGTGG
 
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JMSF026L12+           TATCTGCACCGGGGGGCAGGCCTTGGACTTGAGGGATTGTAAGAGCACAGAAGGTTATGA
JMSF003I24+                                     ACTTGGGGGATTGTAAGAGCACATAAGGTTATGA
JMSF024O05+           TCTCTGCACCGGGCGGAAGGCCTTCGACTTGGGGGATTGTAAGAGCACATAAGGTTATGA
                      ____________________________________________________________
consensus             TCTCTGCACCGGGGGGCAGGCCTTGGACTTGGGGGATTGTAAGAGCACATAAGGTTATGA
 
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JMSF026L12+           GTTGTGGGTAGAGATTCATATGTTTGAGTTTAAGCAGAGCATTTGATGGGAGTAAGAGTG
JMSF003I24+           GTTGTGGGTAGAGATTCATATGTTTGAGTTTAAGCAGAGCATTTGTTGGGAGTAAGAGTG
JMSF024O05+           GTTGTGGGTAGAGATTCATATGTTTGAGTTTAAGCAGAGCATTTGTTGGGAGTAAGAGTG
                      ____________________________________________________________
consensus             GTTGTGGGTAGAGATTCATATGTTTGAGTTTAAGCAGAGCATTTGTTGGGAGTAAGAGTG
 
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JMSF026L12+           AGATCCTGTGGCCTCTTTTTGCAAGATCGTTGGCTAGTTGGAGGTAAGGGATGAAGTGCC
JMSF003I24+           AGATCCTGTGGCCTCTTTTTGCAAGATCGTTGGCTAGTTGGAGGAAAGGGATGAAGTGCC
JMSF024O05+           AGATCCTGTGGCCTCTTTTTGCAAGATCGTTGGCTAGTTGGAGGAAAGGGATGAAGTGCC
                      ____________________________________________________________
consensus             AGATCCTGTGGCCTCTTTTTGCAAGATCGTTGGCTAGTTGGAGGAAAGGGATGAAGTGCC
 
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JMSF026L12+           CAAACGCAAGCCATGGAAACATGGCTATGTGAAGCTTTG                     
JMSF003I24+           CAAACGCAAGCCATGGAAACATGGCTATGTGAAGCTTTG                     
JMSF024O05+           CAAACGCAAGCCATGGAAACATGGCTATGTGAAGCTTTGCTGAATCCATGGATTTCTGCT
                      ____________________________________________________________
consensus             CAAACGCAAGCCATGGAAACATGGCTATGTGAAGCTTTGCTGAATCCATGGATTTCTGCT
 
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JMSF024O05+           TGCAGCACTTGACAGTTTCTTCACGTAGCATTGATTGGTTATGTGCAGTGGTGTTTCTCT
                      ____________________________________________________________
consensus             TGCAGCACTTGACAGTTTCTTCACGTAGCATTGATTGGTTATGTGCAGTGGTGTTTCTCT