Contig 009335:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112B01+                                                           CAGGAAAGCTAT
                      ____________________________________________________________
consensus                                                             CAGGAAAGCTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112B01+           AATACCCAATTACATACACCGAATTAACAGTTGCTACTTAGAAAAATTCAGCACAGAATC
                      ____________________________________________________________
consensus             AATACCCAATTACATACACCGAATTAACAGTTGCTACTTAGAAAAATTCAGCACAGAATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112B01+           TAGATACAGCTCCAATCTTAGAGTTAAGATGCCTTTAAAGTATTGCATTTATATATATTA
                      ____________________________________________________________
consensus             TAGATACAGCTCCAATCTTAGAGTTAAGATGCCTTTAAAGTATTGCATTTATATATATTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112B01+           TTACTCTGTATTTTTGCCAAAAAAAGAAAATGACACATGCTCTTTGATTGAACAATCTTT
                      ____________________________________________________________
consensus             TTACTCTGTATTTTTGCCAAAAAAAGAAAATGACACATGCTCTTTGATTGAACAATCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112B01+           AAATGAAAGCAAGCAAAATTACATACCTATCAGCACCAAAACTCAGTTTGTTAAACTCCG
JMSF024G05+                                   ACCTATCAGCACCAAAACTCAGTTTGTTAAACTCCG
                      ____________________________________________________________
consensus             AAATGAAAGCAAGCAAAATTACATACCTATCAGCACCAAAACTCAGTTTGTTAAACTCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112B01+           CCAGTCTAGTGAAAGCAAGCAAAATTTCACCCTTACCTCCCCCGTCGGTTTGAGGCGACG
JMSF024G05+           CCAGTCTAGTGAAAGCAAGCAAAATTTCACCCTTACCTCCCCCGTCGGTTTGAGGCGACG
                      ____________________________________________________________
consensus             CCAGTCTAGTGAAAGCAAGCAAAATTTCACCCTTACCTCCCCCGTCGGTTTGAGGCGACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112B01+           ACTAGCGAAAGGAGGAGCGTCGTCGGTTTGAGGCGATGCCTGCCGACTATAAGCTTGAAT
JMSF024G05+           ACTAGCGAAAGGAGGAGCGTCGTCGGTTTGAGGCGATGCCTGCCGACTATAAGCTTGAAT
                      ____________________________________________________________
consensus             ACTAGCGAAAGGAGGAGCGTCGTCGGTTTGAGGCGATGCCTGCCGACTATAAGCTTGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112B01+           CTCCGGTTCTACTTCTTCCGGTGAGTATATTTTGAGAGAAAAGGGAGCAAATCCGTCCAG
JMSF024G05+           CTCCGGTTCTACTTCTTCCGGTGAGTATATTTTGAGAGAAAAGGGAGCAAATCCGTCCAG
                      ____________________________________________________________
consensus             CTCCGGTTCTACTTCTTCCGGTGAGTATATTTTGAGAGAAAAGGGAGCAAATCCGTCCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112B01+           ATCAGCGGTGGTGGAGGCCAGCACGCAGTGGCGGTGGCGGAGGCTAGTAGGGTCAGTAGT
JMSF024G05+           ATCAGCGGTGGTGGAGGCCAGCACGCAGTGGCGGTGGCGGAGGCTAGTAGGGTCAGTAGT
                      ____________________________________________________________
consensus             ATCAGCGGTGGTGGAGGCCAGCACGCAGTGGCGGTGGCGGAGGCTAGTAGGGTCAGTAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112B01+           AGGTCGAGACGGAATGGCGACGTCGGCAGTTGCGTCTACTACAGGTCGCGGTGGTTCGCG
JMSF024G05+           AGGTCGAGACGGAATGGCGACGTCGGCAGTTGCGTCTACTACAGGTCGCGGTGGTTCGCG
                      ____________________________________________________________
consensus             AGGTCGAGACGGAATGGCGACGTCGGCAGTTGCGTCTACTACAGGTCGCGGTGGTTCGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112B01+           GCGTTGGCGGAGGAGGCAACATCGGCTGAGAGATGGATGAGACGAAGG            
JMSF024G05+           GCGTTGGCGGAGGAGGCAACATCGGCTGAGAGATGGATGAGACGAAGGCTGAGATGAATC
                      ____________________________________________________________
consensus             GCGTTGGCGGAGGAGGCAACATCGGCTGAGAGATGGATGAGACGAAGGCTGAGATGAATC