Contig 009334:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF024F09-                                              AGGATTCATACTAAATGTTCCAGT
rJMSF038B22-                                    GGATTCTTTAAGGATTCATACTAAATGTTCCAGT
                      ____________________________________________________________
consensus                                       GGATTCTTTAAGGATTCATACTAAATGTTCCAGT
 
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rJMSF024F09-          AACATATGTACACTCACTTGTACCAGGTAATCTGGGCTGTCTGCCTGGTGCAAGTTATAC
rJMSF038B22-          AACATATGTACACTCACTTGTACCAGGTAATCTGGGCTGTCTGCCTGGTGCAAGTTATAC
                      ____________________________________________________________
consensus             AACATATGTACACTCACTTGTACCAGGTAATCTGGGCTGTCTGCCTGGTGCAAGTTATAC
 
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rJMSF024F09-          ACAAGACAATCATAGAAATAAATTCCAGTTATGAGATGTTCATGAACCTCGAGAAGCACG
rJMSF038B22-          ACAAGACAATCATAGAAATAAATTCCAGTTATGAGATGTTCATGAACCTCGAGAAGCACG
                      ____________________________________________________________
consensus             ACAAGACAATCATAGAAATAAATTCCAGTTATGAGATGTTCATGAACCTCGAGAAGCACG
 
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rJMSF024F09-          AGCAAACAGAGAGACGAGGATCTAAGCAGCCTCGTTGTTGTCTTCAAAGGCTGCTCCTGC
rJMSF038B22-          AGCAAACAGAGAGACGAGGATCTAAGCAGCCTCGTTGTTGTCTTCAAAGGCTGCTCCTGC
                      ____________________________________________________________
consensus             AGCAAACAGAGAGACGAGGATCTAAGCAGCCTCGTTGTTGTCTTCAAAGGCTGCTCCTGC
 
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rJMSF024F09-          TGAAATTACCGTGTTCAGAATTGCTTGGTCCCAACTTCTTCGAATACGTGAAGTGAATCT
rJMSF038B22-          TGAAATTACCGTGTTCAGAATTGCTTGGTCCCAACTTCTTCGAATACGTGAAGTGAATCT
                      ____________________________________________________________
consensus             TGAAATTACCGTGTTCAGAATTGCTTGGTCCCAACTTCTTCGAATACGTGAAGTGAATCT
 
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rJMSF024F09-          ATGAAAACAAGACTGCCTACTTGAATGCTCTTCGCCAGACTTGGAAGGAGACCCCGGGAT
rJMSF038B22-          ATGAAAACAAGACTGCCTACTTGAATGCTCTTCGCCAGACTTGGAAGGAGA-CCCGGGAT
                      ____________________________________________________________
consensus             ATGAAAACAAGACTGCCTACTTGAATGCTCTTCGCCAGACTTGGAAGGAGACCCCGGGAT
 
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rJMSF024F09-          GCTTTTCTTCCGGGTAGTACTTCAAAATGCACTTCCCTGATTGGTCGAGTATTTCAGCAT
rJMSF038B22-          GCTTTTCTTCCGGGTAGTACTTCAAAATGCACTTCCCTGATTGGTCGAGTATTTCAGCAT
                      ____________________________________________________________
consensus             GCTTTTCTTCCGGGTAGTACTTCAAAATGCACTTCCCTGATTGGTCGAGTATTTCAGCAT
 
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rJMSF024F09-          CGAATGCAGGTAAGAGTGGTCTCCCAACAACTTGAACATGGGCCACGCATATATAAAACA
rJMSF038B22-          CGAATGCAGGTAAGAGTGGTCTCCCAACAACTTGAACATGGGCCACGCATATATAAAACA
                      ____________________________________________________________
consensus             CGAATGCAGGTAAGAGTGGTCTCCCAACAACTTGAACATGGGCCACGCATATATAAAACA
 
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rJMSF024F09-          GGCCATCCATTTCTTGTCTCTGAACTCTGCCCAACAATTCTAATTGCAAAATCCCTCCAA
rJMSF038B22-          GGCTATCCATTTCTTGTCTCTGAACTCTGCCCAACAATTCTAATTGCAAAATCCCTCCAA
                      ____________________________________________________________
consensus             GGCTATCCATTTCTTGTCTCTGAACTCTGCCCAACAATTCTAATTGCAAAATCCCTCCAA
 
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rJMSF024F09-          CACAAAGCACCGCCTTCGGCAGCTTGAATTTTTGCAGCTTCTTATCTTGAGCCATTGGGA
rJMSF038B22-          CACAAAGCACCGCCTTCGGCAGCTTGAATTTTTGCAGCTTCTTATCTTGAGCCATTGGGA
                      ____________________________________________________________
consensus             CACAAAGCACCGCCTTCGGCAGCTTGAATTTTTGCAGCTTCTTATCTTGAGCCATTGGGA
 
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rJMSF024F09-          ATTCAGGCGAGGTATATGTCCACACAAACTTGTCACTAAACGGTTCTTTAACGCCTCCAA
rJMSF038B22-          ATTCAGGCGAGGTATATGTCCACACAAACTTGTCACTAAACGGTTCTTTAACGCCTCCAA
                      ____________________________________________________________
consensus             ATTCAGGCGAGGTATATGTCCACACAAACTTGTCACTAAACGGTTCTTTAACGCCTCCAA
 
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rJMSF024F09-          ACTCATCTGTGCGATTACGTTCTAATTCCATAGGTTGCTTAGGATGCCCCAATCTGAACC
rJMSF038B22-          ACTCATCTGTGCGATTACGTTCTAATTCCATAGGTTGCTTAGGATGCCCCAATCTGAACC
                      ____________________________________________________________
consensus             ACTCATCTGTGCGATTACGTTCTAATTCCATAGGTTGCTTAGGATGCCCCAATCTGAACC
 
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rJMSF024F09-          GCACTGCCTTCGCTGAA                                           
rJMSF038B22-          GCACTGCCTTCGCTGAATATATCGGGAAGCCAAACTGAAAATAGGCTTGAAACGGCTGTA
JMSF038B22+                                 CGGGAAGCCAAACTGAAAATAGGCTTGAAACGGCTGTA
                      ____________________________________________________________
consensus             GCACTGCCTTCGCTGAATATATCGGGAAGCCAAACTGAAAATAGGCTTGAAACGGCTGTA
 
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rJMSF038B22-          CATGAATCTCAGTAATCACGCAAAACTTTGCAGCTAGTTCATATGTCAGTGTCTCGG   
JMSF038B22+           CATGAATCTCAGTAATCACGCAAAACTTTGCAGCTAGTTCATATGTCAGTGTCTCGGGGA
                      ____________________________________________________________
consensus             CATGAATCTCAGTAATCACGCAAAACTTTGCAGCTAGTTCATATGTCAGTGTCTCGGGGA
 
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JMSF038B22+           CAGCAGGGTCACTTGCTCCTTTGCTCGACCAGTATGAAGCGCTACGACCAACCATATCAT
JMFS036D05+                                 GCTCGACCAGTATGAAGCGCTACGACCAACCATATCAT
                      ____________________________________________________________
consensus             CAGCAGGGTCACTTGCTCCTTTGCTCGACCAGTATGAAGCGCTACGACCAACCATATCAT
 
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JMSF038B22+           TTGGAACTAAAGTATTCCGGATGCTTTCTTCGGGATAGTTATCAGTGCTCGATGCACAAA
JMFS036D05+           TTGGAACTAAAGTATTCCGGATGCTTTCTTCGGGATAGTTATCAGTGCTCGATGCACAAA
JMSF024F09+                                       TTCGGGATAGTTATCAGTGCTCGATGCACAAA
                      ____________________________________________________________
consensus             TTGGAACTAAAGTATTCCGGATGCTTTCTTCGGGATAGTTATCAGTGCTCGATGCACAAA
 
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JMSF038B22+           TGGCCTCCAAGATGCAATCTTTCTTCAGAAAGGGACTCAACCCTCTGCTCAAAAAGGCAT
JMFS036D05+           TGGCCTCCAAGATGCAATCTTTCTTCAGAAAGGGACTCAACCCTCTGCTCAAAAAGGCAT
JMSF024F09+           TGGCCTCCAAGATGCAATCTTTCTTCAGAAAGGGACTCAACCCTCTGCTCAAAAAGGCAT
                      ____________________________________________________________
consensus             TGGCCTCCAAGATGCAATCTTTCTTCAGAAAGGGACTCAACCCTCTGCTCAAAAAGGCAT
 
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JMSF038B22+           ACACTCGGTGATCCCTCTCCAAGCGTGCCAACTTCACAGACTCGTCAACCTCAACTTCCA
JMFS036D05+           ACACTCGGTGATCCCTCTCCAAGCGTGCCAACTTCACAGACTCGTCAACCTCAACTTCCA
JMSF024F09+           ACACTCGGTGATCCCTCTCCAAGCGTGCCAACTTCACAGACTCGTCAACCTCAACTTCCA
                      ____________________________________________________________
consensus             ACACTCGGTGATCCCTCTCCAAGCGTGCCAACTTCACAGACTCGTCAACCTCAACTTCCA
 
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JMSF038B22+           CGGTGTCAATCGTGTTTTTGTCTCCTTCGATGGCATCAGCAATACTCGATACTTCCGGAA
JMFS036D05+           CGGTGTCAATCGTGTTTTTGTCTCCTTCGATGGCATCAGCAATACTCGATACTTCCGGAA
JMSF024F09+           CGGTGTCAATCGTGTTTTTGTCTCCTTCGATGGCATCAGCAATACTCGATACTTCCGGAA
                      ____________________________________________________________
consensus             CGGTGTCAATCGTGTTTTTGTCTCCTTCGATGGCATCAGCAATACTCGATACTTCCGGAA
 
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JMSF038B22+           ACATTTCCAAGCAGAGACGTTTACAAAACCCATTTTCAATCACGTATTGGCGCCAGGAGC
JMFS036D05+           ACATTTCCAAGCAGAGACGTTTACAAAACCCATTTTCAATCACGTATTGGCGCCAGGAGC
JMSF024F09+           ACATTTCCAAGCAGAGACGTTTACAAAACCCATTTTCAATCACGTATTGGCGCCAGGAGC
                      ____________________________________________________________
consensus             ACATTTCCAAGCAGAGACGTTTACAAAACCCATTTTCAATCACGTATTGGCGCCAGGAGC
 
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JMSF038B22+           TCGAGACAGCGCCAACACGAACAAAATCAGAAGGGTCCTCCAAACAAGCCAGGATTTTCA
JMFS036D05+           TCGAGACAGCGCCAACACGAACAAAATCAGAAGGGTCCTCCAAACAAGCCAGGATTTTCA
JMSF024F09+           TCGAGACAGCGCCAACACGAACAAAATCAGAAGGGTCCTCCAAACAAGCCAGGATTTTCA
                      ____________________________________________________________
consensus             TCGAGACAGCGCCAACACGAACAAAATCAGAAGGGTCCTCCAAACAAGCCAGGATTTTCA
 
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JMSF038B22+           TAGACATGTCTGGTCCAAGCCACTGTATAAAATCACCACAATCTTCCATCTTCTACAATT
JMFS036D05+           TAGACATGTCTGGTCCAAGCCACTGTATAAAATCACCACAATCTTCCATCTTCTACAATT
JMSF024F09+           TAGACATGTCTGGTCCAAGCCACTGTATAAAATCACCACAATCTTCCATCTTCTACAATT
                      ____________________________________________________________
consensus             TAGACATGTCTGGTCCAAGCCACTGTATAAAATCACCACAATCTTCCATCTTCTACAATT
 
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JMSF038B22+           TCTCTCTCTAACAATAAAGCCAACAACTCTCAACCAATCCTGCCTCTTGTCCGCTTTACG
JMFS036D05+           TCTCTCTCTAACAATAAAGCCAACAACTCTCAACCAATCCTGCCTCTTGTCCGCTTTACG
JMSF024F09+           TCTCTCTCTAACAATAAAGCCAACAACTCTCAACCAATCCTGCCTCTTGTCCGCTTTACG
                      ____________________________________________________________
consensus             TCTCTCTCTAACAATAAAGCCAACAACTCTCAACCAATCCTGCCTCTTGTCCGCTTTACG
 
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JMSF038B22+           AGTCAGAAAACCAAGAAAGAGATCTAAAGTGAAAAACCTGCAAC                
JMFS036D05+           AGTCAGAAAACCAAGAAAGAGATCTAAAGTGAAAAACCTGCAACTCGGAAAAGAAAGGAG
JMSF024F09+           AGTCAGAAAACCAAGAAAGAGATCTAAAGTGAAAAACCTGCAACTCGGAAAAGAAAGGAG
                      ____________________________________________________________
consensus             AGTCAGAAAACCAAGAAAGAGATCTAAAGTGAAAAACCTGCAACTCGGAAAAGAAAGGAG
 
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JMFS036D05+           AAAGGTGTGTGAGTTTTG                                          
JMSF024F09+           AAAGGTGTGTGAGTTTTGAGGGATGGCTGGGTGGGTAGCACGACACCGACAGAGGCGGCT
                      ____________________________________________________________
consensus             AAAGGTGTGTGAGTTTTGAGGGATGGCTGGGTGGGTAGCACGACACCGACAGAGGCGGCT
 
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JMSF024F09+           TTTGTTTTCTTGACGATGATAGTGACGAGGGAAAGTGAATCCAAAACAGTGTACTCTTCG
                      ____________________________________________________________
consensus             TTTGTTTTCTTGACGATGATAGTGACGAGGGAAAGTGAATCCAAAACAGTGTACTCTTCG
 
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JMSF024F09+           ACCCGATTTTACCTTCCACCCAAACCTGAATGCTAGTACGACAATGGGAATTCAACGTTC
                      ____________________________________________________________
consensus             ACCCGATTTTACCTTCCACCCAAACCTGAATGCTAGTACGACAATGGGAATTCAACGTTC