Contig 009333:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016M10Sequence596009333 (7)779002698 (5)ref|XP_004241498.1|6e-81PREDICTED: probable boron transporter 2 [Solanum lycopersicum]
JMFS008D11Sequence619009333 (7)
JMFS052H09Sequence617009333 (7)
JMFS067F04Sequence627009333 (7)
JMFS108H05Sequence633009333 (7)
JMFS142D12Sequence620009333 (7)
JMSF024E11Sequence708009333 (7)783002698 (5)ref|XP_004241498.1|2e-95PREDICTED: probable boron transporter 2 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFS052H09+                                                        TTAATGGATATATAA
                      ____________________________________________________________
consensus                                                          TTAATGGATATATAA
 
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JMFS052H09+           AGAAAGAATGATATTGTGTATATATCCAAGAAGAACAAAAGAATCAATTAGCAAAANAGT
JMFS108H05+                                                                     GT
                      ____________________________________________________________
consensus             AGAAAGAATGATATTGTGTATATATCCAAGAAGAACAAAAGAATCAATTAGCAAAANAGT
 
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JMFS052H09+           GTAACTTTGGTAAAGGATGGAATTTGATATCCAACTTCTGAACAAGACCTCTACCTACTT
JMFS108H05+           GTAACTTTGGTAAAGGATGGAATTTGATATCCAACTTCTGAACAAGACCTCTACCTACTT
JMFS067F04+                      AAAGGATGGAATTTGATATCCAACTTCTGAACAAGACCTCTACCTACTT
                      ____________________________________________________________
consensus             GTAACTTTGGTAAAGGATGGAATTTGATATCCAACTTCTGAACAAGACCTCTACCTACTT
 
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JMFS052H09+           GAATTCCATGGAGGCAAAAATTAGTTAGATTAACGAAACAAACCCATACTTATACAGAAT
JMFS108H05+           GAATTCCATGGAGGCAAAAATTAGTTAGATTAACGAAACAAACCCATACTTATACAGAAT
JMFS067F04+           GAATTCCATGGAGGCAAAAATTAGTTAGATTAACGAAACAAACCCATACTTATACAGAAT
                      ____________________________________________________________
consensus             GAATTCCATGGAGGCAAAAATTAGTTAGATTAACGAAACAAACCCATACTTATACAGAAT
 
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JMFS052H09+           CAAAAAACTAACGGAATAAATACCAACTTTCCATCCTCCAAGAAATCAACTAGCGCTTAA
JMFS108H05+           CAAAAAACTAACGGAATAAATACCAACTTTCCATCCTCCAAGAAATCAACTAGCGCTTAA
JMFS067F04+           CAAAAAACTAACGGAATAAATACCAACTTTCCATCCTCCAAGAAATCAACTAGCGCTTAA
JMFS008D11+                  CTAACGGAATAAATACCAACTTTCCATCCTCCAAGAAATCAACTAGCGCTTAA
JMFS142D12+                 ACTAACGGAATAAATACCAACTTTCCATCCTCCAAGAAATCAACTAGCGCTTAA
                      ____________________________________________________________
consensus             CAAAAAACTAACGGAATAAATACCAACTTTCCATCCTCCAAGAAATCAACTAGCGCTTAA
 
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JMFS052H09+           CTTGGACAGAGTAGGGATCCATGACAACAATTTTCAAACTGTTCATAAAAATGCTCTGTC
JMFS108H05+           CTTGGACAGAGTAGGGATCCATGACAACAATTTTCAAACTGTTCATAAAAATGCTCTGTC
JMFS067F04+           CTTGGACAGAGTAGGGATCCATGACAACAATTTTCAAACTGTTCATAAAAATGCTCTGTC
JMFS008D11+           CTTGGACAGAGTAGGGATCCATGACAACAATTTTCAAACTGTTCATAAAAATGCTCTGTC
JMFS142D12+           CTTGGACAGAGTAGGGATCCATGACAACAATTTTCAAACTGTTCATAAAAATGCTCTGTC
JMFF016M10+              GGACAGAGTAGGGATCCATGACAACAATTTTCAAACTGTTCATAAAAATGCTCTGTC
                      ____________________________________________________________
consensus             CTTGGACAGAGTAGGGATCCATGACAACAATTTTCAAACTGTTCATAAAAATGCTCTGTC
 
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JMFS052H09+           AAAGTAGAAAATCTCAAAGAGGCCTAGGTTCCAGTTACATAGTTGAAATCTATAAATGCG
JMFS108H05+           AAAGTAGAAAATCTCAAAGAGGCCTAGGTTCCAGTTACATAGTTGAAATCTATAAATGCG
JMFS067F04+           AAAGTAGAAAATCTCAAAGAGGCCTAGGTTCCAGTTACATAGTTGAAATCTATAAATGCG
JMFS008D11+           AAAGTAGAAAATCTCAAAGAGGCCTAGGTTCCAGTTACATAGTTGAAATCTATAAATGCG
JMFS142D12+           AAAGTAGAAAATCTCAAAGAGGCCTAGGTTCCAGTTACATAGTTGAAATCTATAAATGCG
JMFF016M10+           AAAGTAGAAAATCTCAAAGAGGCCTAGGTTCCAGTTACATAGTTGAAATCTATAAATGCG
JMSF024E11+                       CTCAAAGAGGCCTAGGTTCCAGTTACATAGTTGAAATCTATAAATGCG
                      ____________________________________________________________
consensus             AAAGTAGAAAATCTCAAAGAGGCCTAGGTTCCAGTTACATAGTTGAAATCTATAAATGCG
 
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JMFS052H09+           AGTCTATGGATGTTTGACCAAAAGAGTTGGTAAATATAGGAACCTCAATCAATGATTTAG
JMFS108H05+           AGTCTATGGATGTTTGACCAAAAGAGTTGGTAAATATAGGAACCTCAATCAATGATTTAG
JMFS067F04+           AGTCTATGGATGTTTGACCAAAAGAGTTGGTAAATATAGGAACCTCAATCAATGATTTAG
JMFS008D11+           AGTCTATGGATGTTTGACCAAAAGAGTTGGTAAATATAGGAACCTCAATCAATGATTTAG
JMFS142D12+           AGTCTATGGATGTTTGACCAAAAGAGTTGGTAAATATAGGAACCTCAATCAATGATTTAG
JMFF016M10+           AGTCTATGGATGTTTGACCAAAAGAGTTGGTAAATATAGGAACCTCAATCAATGATTTAG
JMSF024E11+           AGTCTATGGATGTTTGACCAAAAGAGTTGGTAAATATAGGAACCTCAATCAATGATTTAG
                      ____________________________________________________________
consensus             AGTCTATGGATGTTTGACCAAAAGAGTTGGTAAATATAGGAACCTCAATCAATGATTTAG
 
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JMFS052H09+           CGAGAACCCATTATTGAACAAGCCGTTTTCAGTACTCTAGAACAGATTCAACAAAATGGG
JMFS108H05+           CGAGAACCCATTATTGAACAAGCCGTTTTCAGTACTCTAGAACAGATTCAACAAAATGGG
JMFS067F04+           CGAGAACCCATTATTGAACAAGCCGTTTTCAGTACTCTAGAACAGATTCAACAAAATGGG
JMFS008D11+           CGAGAACCCATTATTGAACAAGCCGTTTTCAGTACTCTAGAACAGATTCAACAAAATGGG
JMFS142D12+           CGAGAACCCATTATTGAACAAGCCGTTTTCAGTACTCTAGAACAGATTCAACAAAATGGG
JMFF016M10+           CGAGAACCCATTATTGAACAAGCCGTTTTCAGTACTCTAGAACAGATTCAACAAAATGGG
JMSF024E11+           CGAGAACCCATTATTGAACAAGCCGTTTTCAGTACTCTAGAACAGATTCAACAAAATGGG
                      ____________________________________________________________
consensus             CGAGAACCCATTATTGAACAAGCCGTTTTCAGTACTCTAGAACAGATTCAACAAAATGGG
 
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JMFS052H09+           CATTGACCAAACACAAAAACCTGAGGAATTAGCGAAATCCCATGATTGGGAATTGGACAG
JMFS108H05+           CATTGACCAAACACAAAAACATGAGGAATTAGCGAAATCCCATGATTGGGAATTGGACAG
JMFS067F04+           CATTGACCAAACACAAAAACCTGAGGAATTAGCGAAATCCCATGATTGGGAATTGGACAG
JMFS008D11+           CATTGACCAAACACAAAAACCTGAGGAATTAGCGAAATCCCATGATTGGGAATTGGACAG
JMFS142D12+           CATTGACCAAACACAAAAACCTGAGGAATTAGCGAAATCCCATGATTGGGAATTGGACAG
JMFF016M10+           CATTGACCAAACACAAAAACCTGAGGAATTAGCGAAATCCCATGATTGGGAATTGGACAG
JMSF024E11+           CATTGACCAAACACAAAAACCTGAGGAATTAGCGAAATCCCATGATTGGGAATTGGACAG
                      ____________________________________________________________
consensus             CATTGACCAAACACAAAAACCTGAGGAATTAGCGAAATCCCATGATTGGGAATTGGACAG
 
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JMFS052H09+           ACAGCGGTGATTTAATCCGATTGAAAGCAAAGGGGCATCAATGAAAGAAAGAAAACAGAT
JMFS108H05+           ACAGCGGTGATTTAATCCGATTGAAAGCAAAGGGGCATCAATGAAAGAAAGAAAACAGAT
JMFS067F04+           ACAGCGGTGATTTAATCCGATTGAAAGCAAAGGGGCATCAATGAAAGAAAGAAAACAGAT
JMFS008D11+           ACAGCGGTGATTTAATCCGATTGAAAGCAAAGGGGCATCAATGAAAGAAAGAAAACAGAT
JMFS142D12+           ACAGCGGTGATTTAATCCGATTGAAAGCAAAGGGGCATCAATGAAAGAAAGAAAACAGAT
JMFF016M10+           ACAGCGGTGATTTAATCCGATTGAAAGCAAAGGGGCATCAATGAAAGAAAGAAAACAGAT
JMSF024E11+           ACAGCGGTGATTTAATCCGATTGAAAGCAAAGGGGCATCAATGAAAGAAAGAAAACAGAT
                      ____________________________________________________________
consensus             ACAGCGGTGATTTAATCCGATTGAAAGCAAAGGGGCATCAATGAAAGAAAGAAAACAGAT
 
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JMFS052H09+           TG                                                          
JMFS108H05+           TGTTGGCTCTTACATTATACAGAACGGAACAAAAGCTTCAAAGGAACAGTGGATTTCAAG
JMFS067F04+           TGTTGGCTCTTACATTATACAGAACGGAACAAAAGCTTCAAAGGAACAGTGGATTTCAAG
JMFS008D11+           TGTTGGCTCTTACATTATACAGAACGGAACAAAAGCTTCAAAGGAACAGTGGATTTCAAG
JMFS142D12+           TGTTGGCTCTTACATTATACAGAACGGAACAAAAGCTTCAAAGGAACAGTGGATTTCAAG
JMFF016M10+           TGTTGGCTCTTACATTATACAGAACGGAACAAAAGCTCCAAAGGAACAGTGGATTTCAAG
JMSF024E11+           TGTTGGCTCTTACATTATACAGAACGGAACAAAAGCTTCAAAGGAACAGTGGATTTCAAG
                      ____________________________________________________________
consensus             TGTTGGCTCTTACATTATACAGAACGGAACAAAAGCTTCAAAGGAACAGTGGATTTCAAG
 
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JMFS108H05+           AAGATGAGGAAAAGACAGAAAGAAACAAACA                             
JMFS067F04+           AAGATGAGGAAAAGACAGAAAGAAACAAACAGTTCCCA                      
JMFS008D11+           AAGATGAGGAAAAGACAGAAAGAAACAAACAGTTCCCAATTTACATTAGCTGAGAAGAGG
JMFS142D12+           AAGATGAGGAAAAGACAGAAAGAAACAAACAGTTCCCAATTTACATTAGCTGAGAAGAGG
JMFF016M10+           AAGATGAGGAAAAGACAGAAAGAAACAAACAGTTCCCAATTTACATTAGCTGAGAAGAGG
JMSF024E11+           AAGATGAGGAAAAGACAGAAAGAAACAAACAGTTCCCAATTTACATTAGCTGAGAAGAGG
                      ____________________________________________________________
consensus             AAGATGAGGAAAAGACAGAAAGAAACAAACAGTTCCCAATTTACATTAGCTGAGAAGAGG
 
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JMFS008D11+           AAATTAAGCAAGCGCGGAAGGAAAACAAGAAAGGGGAATGTGGGTGTGTGAGAGAGAAGA
JMFS142D12+           AAATTAAGCAAGCGCGGAAGGAAAACAAGAAAGGGGAATGTGGGTGTGTGAGAGAGAAGA
JMFF016M10+           AAATTAAGCAAGCGCGGAAGGAAAACAAGAAAGGGGAATGTGGGTGTGTGAGAGAGAAGA
JMSF024E11+           AAATTAAGCAAGCGCGGAAGGAAAACAAGAAAGGGGAATGTGGGTGTGTGAGAGAGAAGA
                      ____________________________________________________________
consensus             AAATTAAGCAAGCGCGGAAGGAAAACAAGAAAGGGGAATGTGGGTGTGTGAGAGAGAAGA
 
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JMFS008D11+           AGAACGAAACAAGAAAACTCACTCCA                                  
JMFS142D12+           AGAACGAAACAAGAAAACTCACTCCA                                  
JMFF016M10+           AGAACGAAACAAGAAAACTCACTCCACTTGGGCAAATGGGGGTGTAATTGGTGTAAAGT 
JMSF024E11+           AGAACGAAACAAGAAAACTCACTCCACTTGGGCAAATGGGGGTGTAATTGGTGTGAAGTG
                      ____________________________________________________________
consensus             AGAACGAAACAAGAAAACTCACTCCACTTGGGCAAATGGGGGTGTAATTGGTGTGAAGTG
 
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JMSF024E11+           TGAAGTGAGTGGCGTGACCAAGAATAAATAACAACAACTTTTCTGCTGCCAGAACAAACA
                      ____________________________________________________________
consensus             TGAAGTGAGTGGCGTGACCAAGAATAAATAACAACAACTTTTCTGCTGCCAGAACAAACA
 
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JMSF024E11+           AAATAATTGAGACGTGGGGAGATAGAACGCAAAAACCAAGTAGTAGTAGTTTAATTTCAA
                      ____________________________________________________________
consensus             AAATAATTGAGACGTGGGGAGATAGAACGCAAAAACCAAGTAGTAGTAGTTTAATTTCAA
 
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JMSF024E11+           TGGTGGTTTAGGTAAAAATTGTGCGTATAATAATAATTTCAACTCGCAACTCGCAAGATC
                      ____________________________________________________________
consensus             TGGTGGTTTAGGTAAAAATTGTGCGTATAATAATAATTTCAACTCGCAACTCGCAAGATC