| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF004K14 | Sequence | 415 | 009332 (9) | ref|XP_011078829.1| | 8e-11 | PREDICTED: enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic-like [S | 287 | 008811 (47) | ref|XP_010273654.1| | 70.1 | PREDICTED: mannose/glucose-specific lectin-like [Nelumbo nucifera] |
| JMSF024B08 | Sequence | 681 | 009332 (9) | ref|XP_011078829.1| | 6e-71 | PREDICTED: enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic-like [S | 732 | 009332 (9) | emb|CDP10132.1| | 2e-90 | unnamed protein product [Coffea canephora] |
| JMSF028G08 | Sequence | 636 | 009332 (9) | ref|XP_011078829.1| | 3e-60 | PREDICTED: enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic-like [S | 760 | 009332 (9) | emb|CDP10132.1| | 3e-98 | unnamed protein product [Coffea canephora] |
| JMSF036L08 | Sequence | 654 | 009332 (9) | ref|XP_011078829.1| | 3e-72 | PREDICTED: enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic-like [S | 749 | 009332 (9) | emb|CDP10132.1| | 3e-90 | unnamed protein product [Coffea canephora] |
| JMSF048D18 | Sequence | 700 | 009332 (9) | ref|XP_011078829.1| | 1e-108 | PREDICTED: enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic-like [S | 762 | 009332 (9) | emb|CDP10132.1| | 8e-108 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMSF024B08- TGTCAATACTTCCCAAAA
rJMSF036L08- CAAGCAAATCAGTTAAATGTCAATACTTCCCAAAA
____________________________________________________________
consensus CAAGCAAATCAGTTAAATGTCAATACTTCCCAAAA
. : . : . : . : . : . :
rJMSF024B08- CATCAAACATTATCAAATAAGTGTTACTCTAGACAATAATTTAATCATACGGCCTATTCT
rJMSF036L08- CATCAAACATTATCAAATAAGTGTTACTCTAGACAATAATTTAATCATACGGCCTATTCT
rJMSF028G08- AGTGTTACTCTAGACAATAATTTAATCATACGGCCTATTCT
rJMSF048D18- AGTGTTACTCTAGACAATAATTTAATCATACGGCCTATTCT
____________________________________________________________
consensus CATCAAACATTATCAAATAAGTGTTACTCTAGACAATAATTTAATCATACGGCCTATTCT
. : . : . : . : . : . :
rJMSF024B08- GAGGGACCCTACATATAGAAATTGACAAGCAATTGACAGGCCATTACTTATTTTGGACGT
rJMSF036L08- GAGGGACCCTACATATAGAAATTGACAAGCAATTGACAGGCCATTACTTATTTTGGACGT
rJMSF028G08- GAGGGACCCTACATATAGAAATTGACAAGCAATTGACAGGCCATTACTTATTTTGGACGT
rJMSF048D18- GAGGGACCCTACATATAGAAATTGACAAGCAATTGACAGGCCATTACTTATTTTGGACGT
____________________________________________________________
consensus GAGGGACCCTACATATAGAAATTGACAAGCAATTGACAGGCCATTACTTATTTTGGACGT
. : . : . : . : . : . :
rJMSF024B08- CAAAATTTGTACGAACTCACACAGAAACAGCTTGTTTAACAGTCTCATGGCTCTTGTCTT
rJMSF036L08- CAAAATTTGTACGAACTCACACAGAAACAGCTTGTTTAACAGTCTCATGGCTCTTGTCTT
rJMSF028G08- CAAAATTTGTACGAACTCACACAGAAACAGCTTGTTTAACAGTCTCATGGCTCTTGTCTT
rJMSF048D18- CAAAATTTGTACGAACTCACACAGAAACAGCTTGTTTAACAGTCTCATGGCTCTTGTCTT
____________________________________________________________
consensus CAAAATTTGTACGAACTCACACAGAAACAGCTTGTTTAACAGTCTCATGGCTCTTGTCTT
. : . : . : . : . : . :
rJMSF024B08- TGGGGATGTCAAGATCCTTAAACACTGGGCTGTCAACTCCCACTCCCATTGCATTAAGCC
rJMSF036L08- TGGGGATGTCAAGATCCTTAAACACTGGGCTGTCAACTCCCACTCCCATTGCATTAAGCC
rJMSF028G08- TGGGGATGTCAAGATCCTTAAACACTGGGCTGTCAACTCCCACTCCCATTGCATTAAGCC
rJMSF048D18- TGGGGATGTCAAGATCCTTAAACACTGGGCTGTCAACTCCCACTCCCATTGCATTAAGCC
____________________________________________________________
consensus TGGGGATGTCAAGATCCTTAAACACTGGGCTGTCAACTCCCACTCCCATTGCATTAAGCC
. : . : . : . : . : . :
rJMSF024B08- CATTATCAACATACACAACAGCGCCCGTGATGGCTGAAGCCAGAGGTGATGCAAGGAAAG
rJMSF036L08- CATTATCAACATACACAACAGCGCCCGTGATGGCTGAAGCCAGAGGTGATGCAAGGAAAG
rJMSF028G08- CATTATCAACATACACAACAGCGCCCGTGATGGCTGAAGCCAGAGGTGATGCAAGGAAAG
rJMSF048D18- CATTATCAACATACACAACAGCGCCCGTGATGGCTGAAGCCAGAGGTGATGCAAGGAAAG
____________________________________________________________
consensus CATTATCAACATACACAACAGCGCCCGTGATGGCTGAAGCCAGAGGTGATGCAAGGAAAG
. : . : . : . : . : . :
rJMSF024B08- CAGCAGCATTCCCAACCTCCTCTGCAGACAACTCCTTTTGCAAGGGAGCATTCTCAATTG
rJMSF036L08- CAGCAGCATTCCCAACCTCCTCTGCAGACAACTCCTTTTGCAAGGGAGCATTCTCAATTG
rJMSF028G08- CAGCAGCATTCCCAACCTCCTCTGCAGACAACTCCTTTTGCAAGGGAGCATTCTCAATTG
rJMSF048D18- CAGCAGCATTCCCAACCTCCTCTGCAGACAACTCCTTTTGCAAGGGAGCATTCTCAATTG
____________________________________________________________
consensus CAGCAGCATTCCCAACCTCCTCTGCAGACAACTCCTTTTGCAAGGGAGCATTCTCAATTG
. : . : . : . : . : . :
rJMSF024B08- AATAGTCAATCATCATATCAATAAAGCCAATAGCTTTTGCAGCACGACTTCTAAGTGGAC
rJMSF036L08- AATAGTCAATCATCATATCAATAAAGCCAATAGCTTTTGCAGCACGACTTCTAAGTGGAC
rJMSF028G08- AATAGTCAATCATCATATCAATAAAGCCAATAGCTTTTGCAGCACGACTTCTAAGTGGAC
rJMSF048D18- AATAGTCAATCATCATATCAATAAAGCCAATAGCTTTTGCAGCACGACTTCTAAGTGGAC
____________________________________________________________
consensus AATAGTCAATCATCATATCAATAAAGCCAATAGCTTTTGCAGCACGACTTCTAAGTGGAC
. : . : . : . : . : . :
rJMSF024B08- CTGCAGAAATTGTGTTTACTCTGACCTTGTGCTTCCTTCCAGCTTCAAAAGCCAGGACTC
rJMSF036L08- CTGCAGAAATTGTGTTTACTCTGACCTTGTGCTTCCTTCCAGCTTCAAAAGCCAGGACTC
rJMSF028G08- CTGCAGAAATTGTGTTTACTCTGACCTTGTGCTTCCTTCCAGCTTCAAAAGCCAGGACTC
rJMSF048D18- CTGCAGAAATTGTGTTTACTCTGACCTTGTGCTTCCTTCCAGCTTCAAAAGCCAGGACTC
____________________________________________________________
consensus CTGCAGAAATTGTGTTTACTCTGACCTTGTGCTTCCTTCCAGCTTCAAAAGCCAGGACTC
. : . : . : . : . : . :
rJMSF024B08- TAGTGTCACTCTCTAAAGCAGATTTTGCTGAGCTCATGCCACCTCCATATCCTGGAATTA
rJMSF036L08- TAGTGTCACTCTCTAAAGCAGATTTTGCTGAGCTCATGCCACCTCCATATCCTGGAATTA
rJMSF028G08- TAGTGTCACTCTCTAAAGCAGATTTTGCTGAGCTCATGCCACCTCCATATCCTGGAATTA
rJMSF048D18- TAGTGTCACTCTCTAAAGCAGATTTTGCTGAGCTCATGCCACCTCCATATCCTGGAATTA
____________________________________________________________
consensus TAGTGTCACTCTCTAAAGCAGATTTTGCTGAGCTCATGCCACCTCCATATCCTGGAATTA
. : . : . : . : . : . :
rJMSF024B08- TCCTTTCAGAAGCAATGTATGTTAAGGAGATTGAAGCACCGCCTGGATTCATAATGCGAA
rJMSF036L08- TCCTTTCAGAAGCAATGTATGTTAAGGAGATTGAAGCACCGCCTGGATTCATAATGCGAA
rJMSF028G08- TCCTTTCAGAAGCAATGTATGTTAAGGAGATTGAAGCACCGCCTGGATTCATAATGCGAA
rJMSF048D18- TCCTTTCAGAAGCAATGTATGTTAAGGAGATTGAAGCACCGCCTGGATTCATAATGCGAA
____________________________________________________________
consensus TCCTTTCAGAAGCAATGTATGTTAAGGAGATTGAAGCACCGCCTGGATTCATAATGCGAA
. : . : . : . : . : . :
rJMSF024B08- GAAAATGTTGAAGCAAAGAAATATAGGAATAGCTTGATGCGGATAATGCTGCAAGATATC
rJMSF036L08- GAAAATGTTGAAGCAAAGAAATATAGGAATAGCTTGATGCGGATAATGCTGCAAGATATC
rJMSF028G08- GAAAATGTTGAAGCAAAGAAATATAGGAATAGCTTGATGCGGATAATGCTGCAAGATATC
rJMSF048D18- GAAAATGTTGAAGCAAAGAAATATAGGAATAGCTTGATGCGGATAATGCTGCAAGATATC
____________________________________________________________
consensus GAAAATGTTGAAGCAAAGAAATATAGGAATAGCTTGATGCGGATAATGCTGCAAGATATC
. : . : . : . : . : . :
rJMSF024B08- CATATCTTGAAGTTTCAAGAAGTGGTTTGGTAACCTCTGGACCATTAGCAAGG
rJMSF036L08- CATATCTTGAAGTTTCAAGAAGTGGTTTGGTAACCTCTGGACCATTAGCAAGG
rJMSF028G08- CATATCTTGAAGTTTCAAGAAGTGGTTTGGTAACCTCTGGACCATTAGCAAGGGAATGCA
rJMSF048D18- CATATCTTGAAGTTTCAAGAAGTGGTTTGGTAACCTCTGGACCATTAGCAAGGGAATGCA
____________________________________________________________
consensus CATATCTTGAAGTTTCAAGAAGTGGTTTGGTAACCTCTGGACCATTAGCAAGGGAATGCA
. : . : . : . : . : . :
rJMSF028G08- CAAGAATGTCAATTGTGCC-AAATCCTGTTTCACAGTTTCAACAACTTCCTTAACAGTC
rJMSF048D18- CAAGAATGTCAATTGTGCCAAAATCCTGTTTCACAGTTTCAACAACTTCCTTAACAGTC
JMSF048D18+ TCAATTGTGCCAAAATCCTGTTTCACAGTTTCAACAACTTCCTTAACAGTCC
____________________________________________________________
consensus CAAGAATGTCAATTGTGCCAAAATCCTGTTTCACAGTTTCAACAACTTCCTTAACAGTCC
. : . : . : . : . : . :
JMSF048D18+ AATTTGAGGAGCCTGCATAACGCTTGTTGGCTTTTATATCTTCGGGAACATCTTCAGGAC
____________________________________________________________
consensus AATTTGAGGAGCCTGCATAACGCTTGTTGGCTTTTATATCTTCGGGAACATCTTCAGGAC
. : . : . : . : . : . :
JMSF048D18+ TGTCGAAAACCGCATCTAGTGGGTACACTTTTTTTATTTCCATCAGTGAACCATCAGGCA
JMSF036L08+ CCATCAGTGAACCATCAGGCA
JMSF024B08+ CCATCAGTGAACCATCAGNCA
____________________________________________________________
consensus TGTCGAAAACCGCATCTAGTGGGTACACTTTTTTTATTTCCATCAGTGAACCATCAGGCA
. : . : . : . : . : . :
JMSF048D18+ AGACTCGTGACTCATCAAATTTCCCACGTCGCAGACTGCTCTCAAAAATATTTAGTGCAG
JMSF036L08+ AGACTCGTGACTCATCAAATTTCCCACGTCGCAGACTGCTCTCAAAAATATTTAGTGCAG
JMSF028G08+ CACGTCGCAGACTGCTCTCAAAAATATTTAGTGCAG
JMSF024B08+ AGACTCGTGACTCATCAAATTTCCCACGTCGCAGACTGCTCTCAAAAATATTTAGTGCAG
____________________________________________________________
consensus AGACTCGTGACTCATCAAATTTCCCACGTCGCAGACTGCTCTCAAAAATATTTAGTGCAG
. : . : . : . : . : . :
JMSF048D18+ GAACCCATGTACCAACAAGAATTTCAGCACCTGCAGCTGCAAGGGACTTTGCTATTGCCC
JMSF036L08+ GAACCCATGTACCAACAAGAATTTCAGCACCTGCAGCTGCAAGGGACTTTGCTATTGCCC
JMSF028G08+ GAACCCATGTACCAACAAGAATTTCAGCACCTGCAGCTGCAAGGGACTTTGCTATTGCCC
JMSF024B08+ GAACCCATGTACCAACAAGAATTTCAGCACCTGCAGCTGCAAGGGACTTTGCTATTGCCC
____________________________________________________________
consensus GAACCCATGTACCAACAAGAATTTCAGCACCTGCAGCTGCAAGGGACTTTGCTATTGCCC
. : . : . : . : . : . :
JMSF048D18+ ATCCATAACCATTATCATCAGCTACACCAGCAATAAATGCCCTCTTGCCTCTCAAGTCAA
JMSF036L08+ ATCCATAACCATTATCATCAGCTACACCAGCAATAAATGCCCTCTTGCCTCTCAAGTCAA
JMSF028G08+ ATCCATAACCATTATCATCAGCTACACCAGCAATAAATGCCCTCTTGCCTCTCAAGTCAA
JMSF024B08+ ATCCATAACCATTATCATCAGCTACACCAGCAATAAATGCCCTCTTGCCTCTCAAGTCAA
____________________________________________________________
consensus ATCCATAACCATTATCATCAGCTACACCAGCAATAAATGCCCTCTTGCCTCTCAAGTCAA
. : . : . : . : . : . :
JMSF048D18+ TTGGCAGCCCTGGCAAAGGGGCATTATCACTTGCACCGGACATTGCCTTTGTAACCATCC
JMSF036L08+ TTGGCAGCCCTGGCAAAGGGGCATTATCACTTGCACCGGACATTGCCTTTGTAACCATCC
JMSF028G08+ TTGGCAGCCCTGGCAAAGGGGCATTATCACTTGCACCGGACATTGCCTTTGTAACCATCC
JMSF004K14+ GTAACCATCC
JMSF024B08+ TTGGCAGCCCTGGCAAAGGGGCATTATCACTTGCACCGGACATTGCCTTTGTAACCATCC
____________________________________________________________
consensus TTGGCAGCCCTGGCAAAGGGGCATTATCACTTGCACCGGACATTGCCTTTGTAACCATCC
. : . : . : . : . : . :
JMSF048D18+ TTCTATGTTTTAAAGGAATGCAACTAAAGCCTTGAGAAGATAGCTTTGTTGCAGAGATAA
JMSF036L08+ TTCTATGTTTTAAAGGAATGCAACTAAAGCCTTGAGAAGATAGCTTTGTTGCAGAGATAA
JMSF028G08+ TTCTATGTTTTAAAGGAATGCAACTAAAGCCTTGAGAAGATAGCTTTGTTGCAGAGATAA
JMSF004K14+ TTCTATGTTTTAAAGGAATGCAACTAAAGCCTTGAGAAGATAGCTTTGTTGCAGAGATAA
JMSF024B08+ TTCTATGTTTTAAAGGAATGCAACTAAAGCCTTGAGAAGATAGCTTTGTTGCAGAGATAA
____________________________________________________________
consensus TTCTATGTTTTAAAGGAATGCAACTAAAGCCTTGAGAAGATAGCTTTGTTGCAGAGATAA
. : . : . : . : . : . :
JMSF048D18+ CACTCAAACTCTTAAGCTCAGCTGCAGATCTGCCCCTATTTTCTAAACCAAAACTTGCAG
JMSF036L08+ CACTCAAACTCTTAAGCTCAGCTGCAGATCTGCCCCTATTTTCTAAACCAAAACTTGCAG
JMSF028G08+ CACTCAAACTCTTAAGCTCAGCTGCAGATCTGCCCCTATTTTCTAAACCAAAACTTGCAG
JMSF004K14+ CACTCAAACTCTTAAGCTCAGCTGCAGATCTGCCCCTATTTTCTAAACCAAAACTTGCAG
JMSF024B08+ CACTCAAACTCTTAAGCTCAGCTGCAGATCTGCCCCTATTTTCTAAACCAAAACTTGCAG
____________________________________________________________
consensus CACTCAAACTCTTAAGCTCAGCTGCAGATCTGCCCCTATTTTCTAAACCAAAACTTGCAG
. : . : . : . : . : . :
JMSF048D18+ TGCTGGACTTGAAAATTTTACGAGATGCAGAAACACAGGGCTTCGCCGCTGCAATTTGCA
JMSF036L08+ TGCTGGACTTGAAAATTTTACGAGATGCAGAAACACAGGGCTTCGCCGCTGCAATTTGCA
JMSF028G08+ TGCTGGACTTGAAAATTTTACGAGATGCAGAAACACAGGGCTTCGCCGCTGCAATTTGCA
JMSF004K14+ TGCTGGACTTGAAAATTTTACGAGATGCAGAAACACAGGGCTTCGCCGCTGCAATTTGCA
JMSF024B08+ TGCTGGACTTGAAAATTTTACGAGATGCAGAAACACAGGGCTTCGCCGCTGCAATTTGCA
____________________________________________________________
consensus TGCTGGACTTGAAAATTTTACGAGATGCAGAAACACAGGGCTTCGCCGCTGCAATTTGCA
. : . : . : . : . : . :
JMSF048D18+ GGCTAGGAGTAGCAGTTGCAGCCATTATAAGCAGCTTAAATTCACCAGAGTAAAGAGGAA
JMSF036L08+ GGCTAGGAGTAGCAGTTGCAGCCATTATAAGCAGCTTAAATTCACCAGAGTAAAGAGGAA
JMSF028G08+ GGCTAGGAGTAGCAGTTGCAGCCATTATAAGCAGCTTAAATTCACCAGAGTAAAGAGGAA
JMSF004K14+ GGCTAGGAGTAGCAGTTGCAGCCATTATAAGCAGCTTAAATTCACCAGAGTAAAGAGGAA
JMSF024B08+ GGCTAGGAGTAGCAGTTGCAGCCATTATAAGCAGCTTAAATTCACCAGAGTAAAGAGGAA
____________________________________________________________
consensus GGCTAGGAGTAGCAGTTGCAGCCATTATAAGCAGCTTAAATTCACCAGAGTAAAGAGGAA
. : . : . : . : . : . :
JMSF048D18+ TCTGCA-----GATCGACAAGGCCGAAGAGAGCGTGAAAGCTTAGGTCTCTC
JMSF036L08+ TCTGCACTGCGGATCGACAAGGCCGAAGAGAGCGTGAAGGCTTAGGTCTCTCTCCCTTTC
JMSF028G08+ TCTGCACTGCGGATCGACAAGGCCGAAGAGAGCGTGAAAGCTTAGGTCTCTCTCCCTTTC
JMSF004K14+ TCTGCACTGCGGATCGACAGGGCCGAAGAGAGCGTGAAAGCTTAGGTCTCTCTCCCTT--
JMSF024B08+ TCTGCACTGCGGATCGACAAGGCCGAAGAGAGCGTGAAAGCTTAGGTCTCTCTCCCTTTC
____________________________________________________________
consensus TCTGCACTGCGGATCGACAAGGCCGAAGAGAGCGTGAAAGCTTAGGTCTCTCTCCCTTTC
. : . : . : . : . : . :
JMSF036L08+ TCTCTCTTTGCTGTTATATATATGCGGTGAGATGTGAGTGTAGAGGGTTTCGATGAAAAC
JMSF028G08+ TCTCTCTTTGCTGTTATATATATGCGGTGAGATGTGAGTGTAGAGGGTTTCGATGAAAAC
JMSF004K14+ TCTCTCTTTGCTGTTATATATATGCGGTGAGATGTGAGTGTAGAGGGTTTCGATGAAAAC
JMSF024B08+ TCTCTCTTTGCTGTTATATATATGCGGTGAGATGTGAGTGTAGAGGGTTTCGATGAAAAC
____________________________________________________________
consensus TCTCTCTTTGCTGTTATATATATGCGGTGAGATGTGAGTGTAGAGGGTTTCGATGAAAAC
. : . : . : . : . : . :
JMSF036L08+ GAAGCTGAAGAAGTTTGACGACGGAGGCC
JMSF028G08+ GAAGCTGAAGAAGTTTGACGACGGAGGCCGTTGGGAAGCTTTGAAAGTGCCGCAGTTGTC
JMSF004K14+ GAAGCTGAAGAAGTTTGACGACGGAGGCC
JMSF024B08+ GAAGCTGAAGAAGTTTGACGACGGAGGCCGTTGGGAAGCTTTGAAAGTGCCGCAGTTGTC
____________________________________________________________
consensus GAAGCTGAAGAAGTTTGACGACGGAGGCCGTTGGGAAGCTTTGAAAGTGCCGCAGTTGTC