| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010J15 | Sequence | 588 | 009329 (9) | ref|XP_009618223.1| | 6e-105 | PREDICTED: probable enoyl-CoA hydratase, mitochondrial isoform X2 [Nicotiana to | 694 | 009329 (9) | emb|CDO98754.1| | 2e-114 | unnamed protein product [Coffea canephora] |
| JMFF033M23 | Sequence | 568 | 009329 (9) | ref|XP_009618223.1| | 2e-100 | PREDICTED: probable enoyl-CoA hydratase, mitochondrial isoform X2 [Nicotiana to | 583 | 009329 (9) | emb|CDO98754.1| | 2e-89 | unnamed protein product [Coffea canephora] |
| JMFN003J03 | Sequence | 611 | 009329 (9) | emb|CDO98754.1| | 2e-105 | unnamed protein product [Coffea canephora] | |||||
| JMFN017P02 | Sequence | 608 | 009329 (9) | ref|XP_009618223.1| | 4e-106 | PREDICTED: probable enoyl-CoA hydratase, mitochondrial isoform X2 [Nicotiana to | |||||
| JMSF023O03 | Sequence | 649 | 009329 (9) | ref|XP_009618223.1| | 1e-111 | PREDICTED: probable enoyl-CoA hydratase, mitochondrial isoform X2 [Nicotiana to | 711 | 009329 (9) | emb|CDO98754.1| | 4e-125 | unnamed protein product [Coffea canephora] |
| JMSF042D21 | Sequence | 611 | 009329 (9) | ref|XP_010065219.1| | 2e-65 | PREDICTED: probable enoyl-CoA hydratase, mitochondrial [Eucalyptus grandis] gb| | 750 | 016171 | ref|XP_006842146.1| | 2e-91 | hypothetical protein AMTR_s00078p00125860 [Amborella trichopoda] gb|ERN03821.1| |
This contig is upended
. : . : . : . : . : . :
rJMFF033M23- TTTATTTCTTTTGGAACGGAAGAACATTACAGGACAAT
rJMFF010J15- GGTAGTTTATTTCTTTTGGAACGGAAGAACATTACAGGACAAT
____________________________________________________________
consensus GGTAGTTTATTTCTTTTGGAACGGAAGAACATTACAGGACAAT
. : . : . : . : . : . :
JMSF042D21+ AAAAAAAAATCTACAAC
JMFN003J03+ AGAGGATGAATACATCCGAGTTTTATTTTACAATGATGAAGAAAAAAAAATCTACAAC
rJMFF033M23- GAAGAGGATGAATACATCCGAGTTTTATTTTACAATGATGAAGAAAAAAAAATCTACAAC
rJMFF010J15- GAAGAGGATGAATACATCCGAGTTTTATTTTACAATGATGAAGAAAAAAAAATCTACAAC
rJMSF023O03- AGAGGATGAATACATCCGAGTTTTATTTTACAATGATGAAG-AAAAAAAATCTACAAC
____________________________________________________________
consensus GAAGAGGATGAATACATCCGAGTTTTATTTTACAATGATGAAGAAAAAAAAATCTACAAC
. : . : . : . : . : . :
JMSF042D21+ TTGGAGGAAGGTTTTTTTGAGCTCCGACTTGCTATGAATTCTTGCATCTTCTGAAATTGC
JMFN003J03+ TTGGAGGAAGGTTTTTTTGAGCTCCGACTTGCTATGAATTCTTGCATCTTCTGAAATTGC
rJMFF033M23- TTGGAGGAAGGTTTTTTTGAGCTCCGACTTGCTATGAATTCTTGCATCTTCTGAAATTGC
rJMFF010J15- TTGGAGGAAGGTTTTTTTGAGCTCCGACTTGCTATGAATTCTTGCATCTTCTGAAATTGC
rJMSF023O03- TTGGAGGAAGGTTTTTTTGAGCTCCGACTTGCTATGAATTCTTGCATCTTCTGAAATTGC
____________________________________________________________
consensus TTGGAGGAAGGTTTTTTTGAGCTCCGACTTGCTATGAATTCTTGCATCTTCTGAAATTGC
. : . : . : . : . : . :
JMSF042D21+ TCCTTAGTCATTCCATTATAATACTCATGCGCTCTCTCCTTCTCAAGAGCAAGAGCACGA
JMFN003J03+ TCCTTAGTCATTCCATTATAATACTCATGCGCTCTCTCCTTCTCAAGAGCAAGAGCACGA
rJMFF033M23- TCCTTAGTCATTCCATTATAATACTCATGCGCTCTCTCCTTCTCAAGAGCAAGAGCACGA
rJMFF010J15- TCCTTAGTCATTCCATTATAATACTCATGCGCTCTCTCCTTCTCAAGAGCAAGAGCACGA
rJMSF023O03- TCCTTAGTCATTCCATTATAATACTCATGCGCTCTCTCCTTCTCAAGAGCAAGAGCACGA
____________________________________________________________
consensus TCCTTAGTCATTCCATTATAATACTCATGCGCTCTCTCCTTCTCAAGAGCAAGAGCACGA
. : . : . : . : . : . :
JMSF042D21+ TCCAAGTCAAGTTTGAAACCATCATTTATTACTGCCTTGTACCTTAACACCATGTCCTGG
JMFN003J03+ TCCAAGTCAAGTTTGAAACCATCATTTATTACTGCCTTGTACCTTAACACCATGTCCTGG
rJMFF033M23- TCCAAGTCAAGTTTGAAACCATCATTTATTACTGCCTTGTACCTTAACACCATGTCCTGG
rJMFF010J15- TCCAAGTCAAGTTTGAAACCATCATTTATTACTGCCTTGTACCTTAACACCATGTCCTGG
rJMSF023O03- TCCAAGTCAAGTTTGAAACCATCATTTATTACTGCCTTGTACCTTAACACCATGTCCTGG
____________________________________________________________
consensus TCCAAGTCAAGTTTGAAACCATCATTTATTACTGCCTTGTACCTTAACACCATGTCCTGG
. : . : . : . : . : . :
JMSF042D21+ TTGTTCTTGATTATTGCTTCTGCAACCTGTCGAGCCTTTTTCAAGAGTTCACTTCTTTCA
JMFN003J03+ TTGTTCTTGATTATTGCTTCTGCAACCTGTCGAGCCTTTTTCAAGAGTTCACTTCTTTCA
rJMFF033M23- TTGTTCTTGATTATTGCTTCTGCAACCTGTCGAGCCTTTTTCAAGAGTTCACTTCTTTCA
rJMFF010J15- TTGTTCTTGATTATTGCTTCTGCAACCTGTCGAGCCTTTTTCAAGAGTTCACTTCTTTCA
rJMSF023O03- TTGTTCTTGATTATTGCTTCTGCAACCTGTCGAGCCTTTTTCAAGAGTTCACTTCTTTCA
JMFF033M23+ A
JMFF010J15+ TTCAAGAGTTCACTTCTTTCA
JMFN017P02+ TTTTCAAGAGTTCACTTCTTTCA
JMSF023O03+ TATTGCTTCTGCAACCTGTCGAGCCTTTTTCAAGAGTTCACTTCTTTCA
____________________________________________________________
consensus TTGTTCTTGATTATTGCTTCTGCAACCTGTCGAGCCTTTTTCAAGAGTTCACTTCTTTCA
. : . : . : . : . : . :
JMSF042D21+ ACAACATGGTTCACAAAACCCAGCCTTTCTGCTTTGTCAGCAGTTAGAGGTGTTGCAGTA
JMFN003J03+ ACAACATGGTTCACAAAACCCAGCCTTTCTGCTTTGTCAGCAGTTAGAGGTGTTGCAGTA
rJMFF033M23- ACAACATGGTTCACAAAACCCAGCCTTTCTGCTTTGTCAGCAGTTAGAGGTGTTGCAGTA
rJMFF010J15- ACAACATGGTTCACAAAACCCAGCCTTTCTGCTTTGTCAGCAGTTAGAGGTGTTGCAGTA
rJMSF023O03- ACAACATGGTTCACAAAACCCAGCCTTTCTGCTTTGTCAGCAGTTAGAGGTGTTGCAGTA
JMFF033M23+ ACAACATGGTTCACAAAACCCAGCNTTTCTGCTTTGTCAGCAGTTAGAGGTGTTGCAGTA
JMFF010J15+ ACAACATGGTTCACAAAACCCAGCCTTTCTGCTTTGTCAGCAGTTAGAGGTGTTGCAGTA
JMFN017P02+ ACAACATGGTTCACAAAACCCAGCCTTTCTGCTTGNTCAGCAGTTAGAGGTGTTGCAGTA
JMSF023O03+ ACAACATGGTTCACAAAACCCAGCCTTTCTGCTTTGTCAGCAGTTAGAGGTGTTGCAGTA
____________________________________________________________
consensus ACAACATGGTTCACAAAACCCAGCCTTTCTGCTTTGTCAGCAGTTAGAGGTGTTGCAGTA
. : . : . : . : . : . :
JMSF042D21+ AGTGACACTTCACGAGCTTTGTTGGGCCCTATTACACGTGAAAGCTTCTGAGATAGACCC
JMFN003J03+ AGTGACACTTCACGAGCTTTGTTGGGCCCTATTACACGTGAAAGCTTCTGAGATAGACCC
rJMFF033M23- AGTGACACTTCACGAGCTTTGTTGGGCCCTATTACACGTGAAAGCTTCTGAGATAGACCC
rJMFF010J15- AGTGACACTTCACGAGCTTTGTTGGGCCCTATTACACGTGAAAGCTTCTGAGATAGACCC
rJMSF023O03- AGTGACACTTCACGAGCTTTGTTGGGCCCTATTACACGTGAAAGCTTCTGAGATAGACCC
JMFF033M23+ AGTGACACTTCACGAGCTTTGTTGGGCCCTATTACACGTGAAAGCTTCTGAGATAGACCC
JMFF010J15+ AGTGACACTTCACGAGCTTTGTTGGGCCCTATTACACGTGAAAGCTTCTGAGATAGACCC
JMFN017P02+ AGTGACACTTCACGAGCTTTGTTGGGCCCTATTACACGTGAAAGCTTCTGAGATAGACCC
JMSF023O03+ AGTGACACTTCACGAGCTTTGTTGGGCCCTATTACACGTGAAAGCTTCTGAGATAGACCC
____________________________________________________________
consensus AGTGACACTTCACGAGCTTTGTTGGGCCCTATTACACGTGAAAGCTTCTGAGATAGACCC
. : . : . : . : . : . :
JMSF042D21+ CAGGAAGGAAATATCCCAAACCTT
JMFN003J03+ CAGGAAGGAAATATCCCAAACCTTGCGTGAGTATCCATGAACTTAGCATCGTTGGAAGCA
rJMFF033M23- CAGGAAGGAAATATCCCAAACCTTGCGTGAGTATCCATGAACTTANCATCGTTGGAAGCA
rJMFF010J15- CAGGAAGGAAATATCCCAAACCTTGCGTGAGTATCCATGAACTTAGCATCGTTGGAAGCA
rJMSF023O03- CAGGAAGGAAATATCCCAAACCTTGCGTGAGTATCCATGAACTTAGCATCGTTGGAAGCA
JMFF033M23+ CAGGAAGGAAATATCCCAAACCTTGCGTGAGTATCCATGAACTTAGCATCGTTGGAAGCA
JMFF010J15+ CAGGAAGGAAATATCCCAAACCTTGCGTGAGTATCCATGAACTTAGCATCGTTGGAAGCA
JMFN017P02+ CAGGAAGGAAATATCCCAAACCTTGCGTGAGTATCCATGAACTTAGCATCGTTGGAAGCA
JMSF023O03+ CAGGAAGGAAATATCCCAAACCTTGCGTGAGTATCCATGAACTTAGCATCGTTGGAAGCA
____________________________________________________________
consensus CAGGAAGGAAATATCCCAAACCTTGCGTGAGTATCCATGAACTTAGCATCGTTGGAAGCA
. : . : . : . : . : . :
JMFN003J03+ ACCAATATGTCGCAAGCGAGGGCGATCTCAAAGCCAGCAGTGACAGCAAAACCGGCAATT
rJMFF033M23- ACCAATATGTCGCAAGCGAGGGCGATCTCAAAGCCAGCAGTGACAGCAAAACCGGCAATT
rJMFF010J15- ACCAATATGTCGCAAGCGAGGGCGATCTCAAAGCCAGCAGTGACAGCAAAACCGGCAATT
rJMSF023O03- ACCAATATGTCGCAAGCGAGGGCGATCTCAAAGCCAGCAGTGACAGCAAAACCGGCAATT
JMFF033M23+ ACCAATATGTCGCAAGCGAGGGCGATCTCAAAGCCAGCAGTGACAGCAAAACCGGCAATT
JMFF010J15+ ACCAATATGTCGCAAGCGAGGGCGATCTCAAAGCCAGCAGTGACAGCAAAACCGGCAATT
JMFN017P02+ ACCAATATGTCGCAAGCGAGGGCGATCTCAAAGCCAGCAGTGACAGCAAAACCGGCAATT
JMSF023O03+ ACCAATATGTCGCAAGCGAGGGCGATCTCAAAGCCAGCAGTGACAGCAAAACCGGCAATT
____________________________________________________________
consensus ACCAATATGTCGCAAGCGAGGGCGATCTCAAAGCCAGCAGTGACAGCAAAACCGGCAATT
. : . : . : . : . : . :
JMFN003J03+ GCTCCGATGATTGGTTTAGGGCAGAGTTGCATCTGTGCCACAGGGTCAGCCTCAACGTCC
rJMFF033M23- GCTCC
rJMFF010J15- GCTCCGATGATTGGTTTAGGGCAGAGTTGCATCTGTGCCACAGGGTCAGCCTCAACGTCC
rJMSF023O03- GCTCCGATGATTGGTTTAGGGCAGAGTTGCATCTGTGCCACAGGGTCAGCCTCAACGTCC
JMFF033M23+ GCTCCGATGATTGGTTTAGGGCAGAGTTGCATCTGTGCCACAGGGTCAGCCTCAACGTCC
JMFF010J15+ GCTCCGATGATTGGTTTAGGGCAGAGTTGCATCTGTGCCACAGGGTCAGCCTCAACGTCC
JMFN017P02+ GCTCCGATGATTGGTTTAGGGCAGAGTTGCATCTGTGCCACAGGGTCAGCCTCAACGTCC
JMSF023O03+ GCTCCGATGATTGGTTTAGGGCAGAGTTGCATCTGTGCCACAGGGTCAGCCTCAACGTCC
____________________________________________________________
consensus GCTCCGATGATTGGTTTAGGGCAGAGTTGCATCTGTGCCACAGGGTCAGCCTCAACGTCC
. : . : . : . : . : . :
JMFN003J03+ TTGACGTCACCCT
rJMFF010J15- TTGACGTCACCCTTGAAAACATCCTCAGCGGCTGTCAAGTCGACTCCGGAG
rJMSF023O03- TTGACGTCACCCTTGAAAACATCCTCAGCGGCTGTCAAGTCGACTCCGGAGCAGAAAGAA
JMFF033M23+ TTGACGTCACCCTTGAAAACATCCTCAGCGGCTGTCAAGTCGACTCCGGAGCAGAAAGAA
JMFF010J15+ TTGACGTCACCCTTGAAAACATCCTCAGCGGCTGTCAAGTCGACTCCGGAGCAGAAAGAA
JMFN017P02+ TTGACGTCACCCTTGAAAACATCCTCAGCGGCTGTCAAGTCGACTCCGGAGCAGAAAGAA
JMSF023O03+ TTGACGTCACCCTTGAAAACATCCTCAGCGGCTGTCAAGTCGACTCCGGAGCAGAAAGAA
____________________________________________________________
consensus TTGACGTCACCCTTGAAAACATCCTCAGCGGCTGTCAAGTCGACTCCGGAGCAGAAAGAA
. : . : . : . : . : . :
rJMSF023O03- GCGCCGGANGCGGTGAGAATGATGACCCGAACCGATTTGTCTGCGCTCAG
JMFF033M23+ GCGCCGGAGGCGGTGAGAATGATGACCCGAACCGATTTGTCTGCGCTCAGAGACTTAAAA
JMFF010J15+ GCGCCGGAGGCGGTGAGAATGATGACCCGAACCGATTTGTCTGCGCTCAGAGACTTAAAA
JMFN017P02+ GCGCCGGAGGCGGTGAGAATGATGACCCGAACCGATTTGTCTGCGCTCAGAGACTTAAAA
JMSF023O03+ GCGCCGGAGGCGGTGAGAATGATGACCCGAACCGATTTGTCTGCGCTCAGAGACTTAAAA
____________________________________________________________
consensus GCGCCGGAGGCGGTGAGAATGATGACCCGAACCGATTTGTCTGCGCTCAGAGACTTAAAA
. : . : . : . : . : . :
JMFF033M23+ CCTTGAGCTAGATCCGCCATCATGGCCTTCGTTAAGGAGTTGAGCGACTTAGGTCGGTTT
JMFF010J15+ CCTTGAGCTAGATCCGCCATCATGGCCTTCGTTAAGGAGTTGAGCGACTTAGGTCGGTTT
JMFN017P02+ CCTTGAGCTAGATCCGCCATCATGGCCTTCGTTAAGGAGTTGAGCGACTTAGGTCGGTTT
JMSF023O03+ CCTTGAGCTAGATCCGCCATCATGGCCTTCGTTAAGGAGTTGAGCGACTTAGGTCGGTTT
____________________________________________________________
consensus CCTTGAGCTAGATCCGCCATCATGGCCTTCGTTAAGGAGTTGAGCGACTTAGGTCGGTTT
. : . : . : . : . : . :
JMFF033M23+ ATTATGATCCATCCAACGCCGTCGGGGTCGCGATTCACCACGATCAGCTTTTCTGGCACC
JMFF010J15+ ATTATGATCCATCCAACGCCGTCGGGGTCGCGATTCACCACGATCAGCTTTTCTGGCACC
JMFN017P02+ ATTATGATCCATCCAACGCCGTCGGGGTCGCGATTCACCACGATCAGCTTTTCTGGCACC
JMSF023O03+ ATTATGATCCATCCAACGCCGTCGGGGTCGCGATTCACCACGATCAGCTTTTCTGGCACC
____________________________________________________________
consensus ATTATGATCCATCCAACGCCGTCGGGGTCGCGATTCACCACGATCAGCTTTTCTGGCACC
. : . : . : . : . : . :
JMFF033M23+ CGGCTCTCCATTTTCTTTTCTCGA
JMFF010J15+ CGGCTCTCCATTTTCTTTTCTCGA
JMFN017P02+ CGGCTCTCCATTTTCTTTTCTCGA
JMSF023O03+ CGGCTCTCCATTTTCTTTTCTCGATTTACAGAATTACAGTACAACAACTATCTATCCTTC
____________________________________________________________
consensus CGGCTCTCCATTTTCTTTTCTCGATTTACAGAATTACAGTACAACAACTATCTATCCTTC