Contig 009326:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF006G16Sequence425009326 (3)ref|XP_011004924.1|101PREDICTED: uncharacterized protein LOC105111310 [Populus euphratica]
JMSF023E09Sequence634009326 (3)ref|XP_007024240.1|2e-63NDH-dependent cyclic electron flow 1 isoform 1 [Theobroma cacao] gb|EOY26862.1| 778009326 (3)gb|KDO56980.1|4e-10hypothetical protein CISIN_1g0293331mg, partial [Citrus sinensis]

Alignment

This contig is upended


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rJMSF023E09-                          GCAGATTATGCATCCAATTTCAGGGGAAGAAAATAGAAAAATAA
                      ____________________________________________________________
consensus                             GCAGATTATGCATCCAATTTCAGGGGAAGAAAATAGAAAAATAA
 
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rJMSF023E09-          AATAGTGGATGATCATCCATCCCCATAAGGTATGCATGTACAATGATTAATGGGACCATG
                      ____________________________________________________________
consensus             AATAGTGGATGATCATCCATCCCCATAAGGTATGCATGTACAATGATTAATGGGACCATG
 
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rJMSF023E09-          TATGAGTTGTTATGTTTCAGATTCCATCTTTGCCCTGTTGGGACCAATAAAAAATTCTAA
                      ____________________________________________________________
consensus             TATGAGTTGTTATGTTTCAGATTCCATCTTTGCCCTGTTGGGACCAATAAAAAATTCTAA
 
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rJMSF023E09-          TAAATCCTTACTTGTAATAATTTTAGCATTACCATTGCTTAATACATCACCTACAACAGG
                      ____________________________________________________________
consensus             TAAATCCTTACTTGTAATAATTTTAGCATTACCATTGCTTAATACATCACCTACAACAGG
 
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rJMSF023E09-          TTGACTTTGGCCCTAGCTTTGATTTACAACATTTATTGCAAAGTACTATCTATTAAATTG
                      ____________________________________________________________
consensus             TTGACTTTGGCCCTAGCTTTGATTTACAACATTTATTGCAAAGTACTATCTATTAAATTG
 
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rJMSF023E09-          TTAGCATAATTCTATGTTTTTTTTGTTAGGCTAGATGTATTTTGACTAGTGGCTCGACCT
                      ____________________________________________________________
consensus             TTAGCATAATTCTATGTTTTTTTTGTTAGGCTAGATGTATTTTGACTAGTGGCTCGACCT
 
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rJMSF023E09-          CGAATAATACATGACGCTTAGACTTTTTTTATACACTTAGTTTAGTAAGACTGAAATCAA
                      ____________________________________________________________
consensus             CGAATAATACATGACGCTTAGACTTTTTTTATACACTTAGTTTAGTAAGACTGAAATCAA
 
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rJMSF023E09-          ATAGCACTTATAAAGATGAAAATAATTATTTATAAAATGAATAGATTGAAACAGGACGTG
                      ____________________________________________________________
consensus             ATAGCACTTATAAAGATGAAAATAATTATTTATAAAATGAATAGATTGAAACAGGACGTG
 
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rJMSF023E09-          AAGGACATTACTCTATTTTCATTGTAGCATGCAATCATTAGAACTTTTTTGGGACTAAAA
                      ____________________________________________________________
consensus             AAGGACATTACTCTATTTTCATTGTAGCATGCAATCATTAGAACTTTTTTGGGACTAAAA
 
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rJMSF023E09-          AGCAGGAGTAATTAATTAATTAATTAATTAGTAGGGAGTAGTATTTAAGATATATTATAT
                      ____________________________________________________________
consensus             AGCAGGAGTAATTAATTAATTAATTAATTAGTAGGGAGTAGTATTTAAGATATATTATAT
 
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rJMSF023E09-          TGGTGTTGAAGTGGATGCTTCCAATTCTGCCCATGCTCCTCCTGATGATTTCAATTCTTT
JMSF023E09+                                     CTGCCCATGCTCCTCCTGATGATTTCAATTCTTT
                      ____________________________________________________________
consensus             TGGTGTTGAAGTGGATGCTTCCAATTCTGCCCATGCTCCTCCTGATGATTTCAATTCTTT
 
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rJMSF023E09-          ATAATTCCACTCATGCCCTTTCCATTCAGGTAGTTGCTGAATCACAAGCGTGCCTTTGGA
JMSF023E09+           ATAATTCCACTCATGCCCTTTCCATTCAGGTAGTTGCTGAATCACAAGCGTGCCTTTGGA
                      ____________________________________________________________
consensus             ATAATTCCACTCATGCCCTTTCCATTCAGGTAGTTGCTGAATCACAAGCGTGCCTTTGGA
 
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rJMSF023E09-          ATTGGGTGTNCCACCTGTGGTTTGGCAGGCTAGTCTC                       
JMSF023E09+           ATTGGGTGTTCCAACTGTGGTTTGGCAGGCTAGTCTCCAGTTCCTGGGTTTCCGTTTCAA
                      ____________________________________________________________
consensus             ATTGGGTGTTCCACCTGTGGTTTGGCAGGCTAGTCTCCAGTTCCTGGGTTTCCGTTTCAA
 
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JMSF006G16+                                                                  TCAAC
JMSF023E09+           TTTTTCATTCTCCTTTTCTGTCCGGGGACTCAGTAGCTCCTTTCCTTCCACTACCTCAAC
                      ____________________________________________________________
consensus             TTTTTCATTCTCCTTTTCTGTCCGGGGACTCAGTAGCTCCTTTCCTTCCACTACCTCAAC
 
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JMSF006G16+           CATGCATGTGCCACAGGTCCCTAATCCGCCGCAGTTACACAGAGCTCTGGAATATGGTCC
JMSF023E09+           CATGCATGTGCCACAGGTCCCTAATCCGCCGCAGTTACACAGAGCTCTGGAATATGGTCC
                      ____________________________________________________________
consensus             CATGCATGTGCCACAGGTCCCTAATCCGCCGCAGTTACACAGAGCTCTGGAATATGGTCC
 
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JMSF006G16+           ATACAACTCTACATTACCATCCAGCATTATGTCTCTCAGCTTTTGGCCTCCCTTAGCTTT
JMSF023E09+           ATACAACTCTACATTACCATCCAGCATTATGTCTCTCAGCTTTTGGCCTCCCTTAGCTTT
                      ____________________________________________________________
consensus             ATACAACTCTACATTACCATCCAGCATTATGTCTCTCAGCTTTTGGCCTCCCTTAGCTTT
 
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JMSF006G16+           GCGATAATGCACGTCTGGGCTCCCATCCGGAAACAATACCGAATGGACGAATGCAATTTT
JMSF023E09+           GCGATAATGCACGTCTGGGCTCCCATCCGGAAACAATACCGAATGGACGAATGCAATTTT
                      ____________________________________________________________
consensus             GCGATAATGCACGTCTGGGCTCCCATCCGGAAACAATACCGAATGGACGAATGCAATTTT
 
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JMSF006G16+           CACCATTGCTTCTTCTTCTTCTGCTTCATCTGGTGTAACAGTACTGCCAGAAGCCCTGAT
JMSF023E09+           CACCATTGCTTCTTCTTCTTCTGCTTCATCTGGTGTAACAGTACTGCCAGAAGCCCTGAT
                      ____________________________________________________________
consensus             CACCATTGCTTCTTCTTCTTCTGCTTCATCTGGTGTAACAGTACTGCCAGAAGCCCTGAT
 
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JMSF006G16+           TTTACCTCCAGAAATGTTTCTGCTGAGATTGGGCGAGGCTGTAAACCTTTTGGGATGGAT
JMSF023E09+           TTTACCTCCAGAAATGTTTCTGCTGAGATTGGGCGAGGCTGTAAACCTTTTGGGATGGAT
                      ____________________________________________________________
consensus             TTTACCTCCAGAAATGTTTCTGCTGAGATTGGGCGAGGCTGTAAACCTTTTGGGATGGAT
 
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JMSF006G16+           AATGGTGGTAAGATATTTAGGGTTATTGAAATTGTATTTGTAGGAAGGTGATGAAAAAGA
JMSF023E09+           AATGGTGGTAAGATATTTAGGGTTATTGAAATTGTATTTGTAGGAAGGTGATGAAAAAGA
                      ____________________________________________________________
consensus             AATGGTGGTAAGATATTTAGGGTTATTGAAATTGTATTTGTAGGAAGGTGATGAAAAAGA
 
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JMSF006G16+           AGGTAGCAGGCCATATGAGTTCATTTTCAATTCGTTTCATATATTTACTCAAAAACTC  
JMSF023E09+           AGGTAGCAGGCCATATGAGTTCATTTTCAATTCGTTTCATATATTTACTCAAAAACTCCC
                      ____________________________________________________________
consensus             AGGTAGCAGGCCATATGAGTTCATTTTCAATTCGTTTCATATATTTACTCAAAAACTCCC