Contig 009325:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023D20Sequence657009325 (3)ref|XP_007211663.1|1e-88hypothetical protein PRUPE_ppa009006mg [Prunus persica] gb|EMJ12862.1| hypotheti782009325 (3)ref|XP_011095434.1|2e-76PREDICTED: cell differentiation protein RCD1 homolog [Sesamum indicum]
JMSF043L01Sequence794009325 (3)ref|XP_008226846.1|1e-126PREDICTED: cell differentiation protein RCD1 homolog [Prunus mume]561005179 (8)ref|XP_006343159.1|84.7PREDICTED: uncharacterized protein LOC102595503 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF023D20-            TTTATTTTATAAACATAAAGATGTTAAAATAATAACTTATCTTAAAACACTACTCTAA
                      ____________________________________________________________
consensus               TTTATTTTATAAACATAAAGATGTTAAAATAATAACTTATCTTAAAACACTACTCTAA
 
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rJMSF023D20-          GTAACGCTTAAAAAATAAGCTAGTAGCTATTAGCTTTAAACTAGCTTAAAAGCTAAATAT
                      ____________________________________________________________
consensus             GTAACGCTTAAAAAATAAGCTAGTAGCTATTAGCTTTAAACTAGCTTAAAAGCTAAATAT
 
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rJMSF023D20-          GCCAAATAGAGCCTAGCTCTTGAAATATGTGAACCCTAAGCTAGGAAAAAGAGTTTAAAT
                      ____________________________________________________________
consensus             GCCAAATAGAGCCTAGCTCTTGAAATATGTGAACCCTAAGCTAGGAAAAAGAGTTTAAAT
 
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rJMSF023D20-          ACTGTTATTGGGTAACATAAATAATAGAAGTCGATAGAGTCTGCAAATATCTGAACTTTT
                      ____________________________________________________________
consensus             ACTGTTATTGGGTAACATAAATAATAGAAGTCGATAGAGTCTGCAAATATCTGAACTTTT
 
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rJMSF023D20-          TACGTTCCTGGAGATTGAGGTTACTGCACAATCAATGGGAAAAATTTTAACCTCAATGTA
                      ____________________________________________________________
consensus             TACGTTCCTGGAGATTGAGGTTACTGCACAATCAATGGGAAAAATTTTAACCTCAATGTA
 
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rJMSF023D20-          GAGCGAAAGAACTTCTCTGGGGATTTTACGTTCAGGCTTTACTATATGCAGCAGATTCAC
                      ____________________________________________________________
consensus             GAGCGAAAGAACTTCTCTGGGGATTTTACGTTCAGGCTTTACTATATGCAGCAGATTCAC
 
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rJMSF023D20-          AACGAGGTCAGGTCAAGCCAATTTAGCTCACCAGCATACGATCAAATCCTCCGCCTGCTT
                      ____________________________________________________________
consensus             AACGAGGTCAGGTCAAGCCAATTTAGCTCACCAGCATACGATCAAATCCTCCGCCTGCTT
 
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rJMSF023D20-          GAAGGGAAGCACAAGGACCTTGCACATTCTGAAGCAGCTGTTGAAGCCACCTCCTTGTTG
                      ____________________________________________________________
consensus             GAAGGGAAGCACAAGGACCTTGCACATTCTGAAGCAGCTGTTGAAGCCACCTCCTTGTTG
 
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rJMSF023D20-          TTGGATCCTCATGAAGGCAATTGCTGAAGGTGGTGGCATCCCTAAGTATGTCTGGAAGAC
                      ____________________________________________________________
consensus             TTGGATCCTCATGAAGGCAATTGCTGAAGGTGGTGGCATCCCTAAGTATGTCTGGAAGAC
 
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rJMSF023D20-          AACTTCTGAGTGCATCGCAAGCCCTTGGATTATCAGATAACCGAAGGTAACACCGAATGA
                      ____________________________________________________________
consensus             AACTTCTGAGTGCATCGCAAGCCCTTGGATTATCAGATAACCGAAGGTAACACCGAATGA
 
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rJMSF023D20-          TATGCTTGAGCAACCTAGACGAGGGCTGCTCAGCAAGTGCAACCACCATGTTTCCCAACA
                      ____________________________________________________________
consensus             TATGCTTGAGCAACCTAGACGAGGGCTGCTCAGCAAGTGCAACCACCATGTTTCCCAACA
 
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rJMSF023D20-          CCCTGCCTACAGCAAAAAACCTCTCCGCCGTGGTACATATGTATTCCAAACCCATATCAT
JMSF043L01+                                  TCCGCCGTGGTACATATGTATTCCAAACCCATATCAT
                      ____________________________________________________________
consensus             CCCTGCCTACAGCAAAAAACCTCTCCGCCGTGGTACATATGTATTCCAAACCCATATCAT
 
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rJMSF023D20-          CCAGAAGGATTTTTTGCACAATGAAAGTTGCAACTGTTTTTGAGAGCTCACTGCCCATCT
JMSF043L01+           CCAGAAGGATTTTTTGCACAATGAAAGTTGCAACTGTTTTTGAGAGCTCACTGCCCATCT
                      ____________________________________________________________
consensus             CCAGAAGGATTTTTTGCACAATGAAAGTTGCAACTGTTTTTGAGAGCTCACTGCCCATCT
 
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rJMSF023D20-          CC                                                          
JMSF043L01+           CCATTGTGCGCAGACAGAGTGGAATTATTTCAGTTGATAGAAGGAAATTGATAACATCAT
                      ____________________________________________________________
consensus             CCATTGTGCGCAGACAGAGTGGAATTATTTCAGTTGATAGAAGGAAATTGATAACATCAT
 
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JMSF043L01+           TGTCATCAACCTTTACCAGGGCACCAATGACACCTAAGCTAGTAAGCCTCAGGTATTCAA
JMSF023D20+              CATCAACCTTTACCAGGGCACCAATGACACCTAAGCTAGTAAGCCTCAGGTATTCAA
                      ____________________________________________________________
consensus             TGTCATCAACCTTTACCAGGGCACCAATGACACCTAAGCTAGTAAGCCTCAGGTATTCAA
 
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JMSF043L01+           AAGGTCTTGATTTGCTTGTTGTATTAAGAAAAGGATACAAATACAGAGGAATATGAGCAT
JMSF023D20+           AAGGTCTTGATTTGCTTGTTGTATTAAGAAAAGGATACAAATACAGAGGAATATGAGCAT
                      ____________________________________________________________
consensus             AAGGTCTTGATTTGCTTGTTGTATTAAGAAAAGGATACAAATACAGAGGAATATGAGCAT
 
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JMSF043L01+           TAAGGAACAGCATTCTGGTGTCTGGGTGAGAGGCTACGCACTGAAGAAGTGCGAGTGCAT
JMSF023D20+           TAAGGAACAGCATTCTGGTGTCTGGGTGAGAGGCTACGCACTGAAGAAGTGCGAGTGCAT
                      ____________________________________________________________
consensus             TAAGGAACAGCATTCTGGTGTCTGGGTGAGAGGCTACGCACTGAAGAAGTGCGAGTGCAT
 
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JMSF043L01+           TGCAAACTCTATTAGATTGAGCAGGAGTGAGGTTTGGTGGTGACAAAACTGGGTAGATGG
JMSF023D20+           TGCAAACTCTATTAGATTGAGCAGGAGTGAGGTTTGGTGGTGACAAAACTGGGTAGATGG
                      ____________________________________________________________
consensus             TGCAAACTCTATTAGATTGAGCAGGAGTGAGGTTTGGTGGTGACAAAACTGGGTAGATGG
 
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JMSF043L01+           AGACAATTTCCTGCAAGAGTGCAGCAATAGTACCAAATGAATTCCATAGTAGTGGGGCCA
JMSF023D20+           AGACAATTTCCTGCAAGAGTGCAGCAATAGTACCAAATGAATTCCATAGTAGTGGGGCCA
                      ____________________________________________________________
consensus             AGACAATTTCCTGCAAGAGTGCAGCAATAGTACCAAATGAATTCCATAGTAGTGGGGCCA
 
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JMSF043L01+           AATCTTGAAATAGTTCTCTCTTCTTGGAGAGCTCGAGAAGAGCGTTCTCTCGGAGATCAG
JMSF023D20+           AATCTTGAAATAGTTCTCTCTTCTTGGAGAGCTCGAGAAGAGCGTTCTCTCGGAGATCAG
                      ____________________________________________________________
consensus             AATCTTGAAATAGTTCTCTCTTCTTGGAGAGCTCGAGAAGAGCGTTCTCTCGGAGATCAG
 
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JMSF043L01+           GATTGCTGAGGTCGAGCACGAGCTGCTCAGCAGATTGCATTTTGCGTTCCTTGTTGGGCT
JMSF023D20+           GATTGCTGAGGTCGAGCACGAGCTGCTCAGCAGATTGCATTTTGCGTTCCTTGTTGGGCT
                      ____________________________________________________________
consensus             GATTGCTGAGGTCGAGCACGAGCTGCTCAGCAGATTGCATTTTGCGTTCCTTGTTGGGCT
 
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JMSF043L01+           GAGCGCCGACGGCGGTGGCGGAGGAAGAGCCAGGACCTCCTCCGAAAGCGGCGGCGGCGC
JMSF023D20+           GAGCGCCGACGGCGGTGGCGGAGGAAGAGCCAGGACCTCCTCCGAAAGCGGCGGCGGCGC
                      ____________________________________________________________
consensus             GAGCGCCGACGGCGGTGGCGGAGGAAGAGCCAGGACCTCCTCCGAAAGCGGCGGCGGCGC
 
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JMSF043L01+           CCATCGAGAGATTCGGAGGGAGATTAGCCATGTATCTCAGTTTTACTCAGATTCTACTTC
JMSF023D20+           CCATCGAGAGATTCGGAGGGAGATTAGCCATGTATCTCAGTTTTACTCAGATTCTACTTC
                      ____________________________________________________________
consensus             CCATCGAGAGATTCGGAGGGAGATTAGCCATGTATCTCAGTTTTACTCAGATTCTACTTC
 
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JMSF043L01+           TGTCCAATACTGGAATGGGAGGAAAATCTGGAAACGGCTGAACGGAGAAGCAGGCAAATA
JMSF023D20+           TGTCCAATACTGGAATGGGAGGAAAATCTGGAAACGGCTGAACGGAGAAGCAGGCAAATA
                      ____________________________________________________________
consensus             TGTCCAATACTGGAATGGGAGGAAAATCTGGAAACGGCTGAACGGAGAAGCAGGCAAATA
 
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JMSF043L01+           TGTCAGTGAAGTTTGATTCAAAAGTGGCGTTGCGC                         
JMSF023D20+           TGTCAGTGAAGTTTGATTCAAAAGTGGCGTTGCGCTGCTGTTACACGTGCCTGGCTGACC
                      ____________________________________________________________
consensus             TGTCAGTGAAGTTTGATTCAAAAGTGGCGTTGCGCTGCTGTTACACGTGCCTGGCTGACC