Contig 009323:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022P17Sequence630009323 (4)ref|XP_009788398.1|1e-32PREDICTED: uncharacterized protein LOC104236215 isoform X2 [Nicotiana sylvestri713001426 (4)ref|XP_004236832.1|370PREDICTED: uncharacterized protein LOC101261219 [Solanum lycopersicum]
JMSF035A22Sequence708009323 (4)ref|XP_009788397.1|5e-40PREDICTED: uncharacterized protein LOC104236215 isoform X1 [Nicotiana sylvestri610001426 (4)ref|XP_006359309.1|115PREDICTED: uncharacterized protein LOC102597261 [Solanum tuberosum]
JMSF035L21Sequence650009323 (4)ref|XP_009788397.1|2e-33PREDICTED: uncharacterized protein LOC104236215 isoform X1 [Nicotiana sylvestri644001426 (4)ref|XP_006359309.1|97.8PREDICTED: uncharacterized protein LOC102597261 [Solanum tuberosum]
JMSF047B19Sequence689009323 (4)ref|XP_009788397.1|1e-36PREDICTED: uncharacterized protein LOC104236215 isoform X1 [Nicotiana sylvestri799001426 (4)ref|XP_004236832.1|187PREDICTED: uncharacterized protein LOC101261219 [Solanum lycopersicum]

Alignment

This contig is upended


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JMSF047B19+                                       GCCCTGTACGTATAAACCCCACGAGTACCCTT
JMSF035A22+                      CTTCCCATGGCCTTCCTGCCCTGTACGTATAAACCCCACGAGTACCCTT
                      ____________________________________________________________
consensus                        CTTCCCATGGCCTTCCTGCCCTGTACGTATAAACCCCACGAGTACCCTT
 
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JMSF047B19+           CCATGGGCTATTCCCGGCAGCCACCCCGTGAGCTACAACCCGAGTCTTAAAATAAAACCT
JMSF035A22+           CCATGGGCTATTCCCGGCAGCCACCCCGTGAGCTACAACCCGAGTCTTAAAATAAAACCT
JMSF035L21+                    ATTCCCGGCAGCCACCCCGTGAGCTACAACCCGAGTCTTAAAATAAAACCT
JMSF022P17+                                         AGCTACAACCCGAGTCTTAAAATAAAACCT
                      ____________________________________________________________
consensus             CCATGGGCTATTCCCGGCAGCCACCCCGTGAGCTACAACCCGAGTCTTAAAATAAAACCT
 
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JMSF047B19+           GGCGGATTCAAGGCCACAGCGGAGCAGCGCAGCATCTTCGGCACCGAGCTCAATCACTGC
JMSF035A22+           GGCGGATTCAAGGCCACAGCGGAGCAGCGCAGCATCTTCGGCACCGAGCTCAATCACTGC
JMSF035L21+           GGCGGATTCAAGGCCACAGCGGAGCAGCGCAGCATCTTCGGCACCGAGCTCAATCACTGC
JMSF022P17+           GGCGGATTCAAGGCCACAGCGGAGCAGCGCAGCATCTTCGGCACCGAGCTCAATCACTGC
                      ____________________________________________________________
consensus             GGCGGATTCAAGGCCACAGCGGAGCAGCGCAGCATCTTCGGCACCGAGCTCAATCACTGC
 
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JMSF047B19+           GGCATTGTGCCTCATCAGCGAGCTAGACAAGGCATCCACGGCACGCAAATAGCCCCCCGC
JMSF035A22+           GGCATTGTGCCTCATCAGCGAGCTAGACAAGGCATCCACGGCACGCAAATAGCCCCCCGC
JMSF035L21+           GGCATTGTGCCTCATCAGCGAGCTAGACAAGGCATCCACGGCACGCAAATAGCCCCCCGC
JMSF022P17+           GGCATTGTGCCTCATCAGCGAGCTAGACAAGGCATCCACGGCACGCAAATAGCCCCCCGC
                      ____________________________________________________________
consensus             GGCATTGTGCCTCATCAGCGAGCTAGACAAGGCATCCACGGCACGCAAATAGCCCCCCGC
 
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JMSF047B19+           AGGAGCACCGTCGTAGGGCAGAATATCAGAAAGCTTAACCCTTGCCAAAGGCTGAAGCGG
JMSF035A22+           AGGAGCACCGTCGTAGGGCAGAATATCAGAAAGCTTAACCCTTGCCAAAGGCTGAAGCGG
JMSF035L21+           AGGAGCACCGTCGTAGGGCAGAATATCAGAAAGCTTAACCCTTGCCAAAGGCTGAAGCGG
JMSF022P17+           AGGAGCACCGTCGTAGGGCAGAATATCAGAAAGCTTAACCCTTGCCAAAGGCTGAAGCGG
                      ____________________________________________________________
consensus             AGGAGCACCGTCGTAGGGCAGAATATCAGAAAGCTTAACCCTTGCCAAAGGCTGAAGCGG
 
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JMSF047B19+           GATAGCACCAAACTCCCCAGGTGGGTGTGCTTGAGCCATTGGCAACGCAATTACATTATC
JMSF035A22+           GATCGCACCAAACTCCCCAGGTGGGTGTGCTTGAGCCATTGGCAACGCAATTACATTATC
JMSF035L21+           GATCGCACCAAACTCCCCAGGTGGGTGTGCTTGAGCCATTGGCAACGCAATTACATTATC
JMSF022P17+           GATCGCACCAAACTCCCCAGGTGGGTGTGCTTGAGCCATTGGCAACGCAATTACATTATC
                      ____________________________________________________________
consensus             GATCGCACCAAACTCCCCAGGTGGGTGTGCTTGAGCCATTGGCAACGCAATTACATTATC
 
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JMSF047B19+           CCGCCCCAGAGAAAGCGGAAAAGTCGAAGGAAACTGAGCGGCGATGGGGACGGCGGCGGT
JMSF035A22+           CCGCCCCAGAGAAAGCGGAAAAGTCGAAGGAAACTGAGCGGCGATGGGGACGGCGGCGGT
JMSF035L21+           CCGCCCCAGAGAAAGCGGAAAAGTCGAAGGAAACTGAGCGGCGATGGGGACGGCGGCGGT
JMSF022P17+           CCGCCCCAGAGAAAGCGGAAAAGTCGAAGGAAACTGAGCGGCGATGGGGACGGCGGCGGT
                      ____________________________________________________________
consensus             CCGCCCCAGAGAAAGCGGAAAAGTCGAAGGAAACTGAGCGGCGATGGGGACGGCGGCGGT
 
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JMSF047B19+           GGCGGATCTAAGAGAGGAGGCGGATGAAGGTGGAGGTGGCGGAGTCGACTGGTGATGCTG
JMSF035A22+           GGCGGATCTAAGAGAGGAGGCGGATGAAGGTGGAGGTGGCGGAGTCGACTGGTGATGCTG
JMSF035L21+           GGCGGATCTAAGAGAGGAGGCGGATGAAGGTGGAGGTGGCGGAGTCGACTGGTGATGCTG
JMSF022P17+           GGCGGATCTAAGAGAGGAGGCGGATGAAGGTGGAGGTGGCGGAGTCGACTGGTGATGCTG
                      ____________________________________________________________
consensus             GGCGGATCTAAGAGAGGAGGCGGATGAAGGTGGAGGTGGCGGAGTCGACTGGTGATGCTG
 
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JMSF047B19+           ATGCATCGCGAGCATAACAATCTACCATGTCTGTGCGTAGCATATACACACATACATATA
JMSF035A22+           ATGCATCGCGAGCATAACAATCTACCATGTCTGTGCGTAGCATATACACACATACATATA
JMSF035L21+           ATGCATCGCGAGCATAACAATCTACCATGTCTGTGCGTAGCATATACACACATACATATA
JMSF022P17+           ATGCATCGCGAGCATAACAATCTACCATGTCTGTGCGTAGCATATACACACATACATATA
                      ____________________________________________________________
consensus             ATGCATCGCGAGCATAACAATCTACCATGTCTGTGCGTAGCATATACACACATACATATA
 
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JMSF047B19+           CAATACAAAATCGACGACGATGATTTCTGTATTGGGGGAGAGATTTTAGGGTTTTGGTAG
JMSF035A22+           CAATACAAAATCGGCGACGATGATTTCTGTATTGGGGGAGAGATTTTAGGGTTTTGGTAG
JMSF035L21+           CAATACAAAATCGACGACGATGATTTCTGTATTGGGGGAGAGATTTTAGGGTTTTGGTAG
JMSF022P17+           CAATACAAAATCGACGACGATGATTTCTGTATTGGGGGAGAGATTTTAGGGTTTTGGTAG
                      ____________________________________________________________
consensus             CAATACAAAATCGACGACGATGATTTCTGTATTGGGGGAGAGATTTTAGGGTTTTGGTAG
 
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JMSF047B19+           AATGAAAAAAGGAGCCTTTCTCAACGGGATTCAGAAACGAGAAATTCCAGTGAGAAAAAT
JMSF035A22+           AATGAAAAAAGGAGCCTTTCTCAACGGGATTCAGAAACGAGAAATTCCAGTGAGAAAAAT
JMSF035L21+           AATGAAAAAAGGAGCCTTTCTCAACGGGATTCAGAAACGAGAAATTCCAGTGAGAAAAAT
JMSF022P17+           AATGAAAAAAGGAGCCTTTCTCAACGGGATTCAGAAACGAGAAATTCCAGTGAGAAAAAT
                      ____________________________________________________________
consensus             AATGAAAAAAGGAGCCTTTCTCAACGGGATTCAGAAACGAGAAATTCCAGTGAGAAAAAT
 
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JMSF047B19+           AGTACTACTCCACTCGAAGTCTTTTCAGCGTTCCTAAAGAAAATCTAAAACACCCCC   
JMSF035A22+           AGTACTACTCCACTCGAAGTCTTTTCAGCGTTCCTAAAGAAAATCTAAAACACCCCC   
JMSF035L21+           AGTACTACTCCACTCGAAGTCTTTTCAGCGTTCCTAAAGAAAATCTAAAACACCCCC   
JMSF022P17+           AGTACTACTCCACTCGAAGTCTTTTCAGCGTTCCTAAAGAAAATCTAAAACACCCCCACC
                      ____________________________________________________________
consensus             AGTACTACTCCACTCGAAGTCTTTTCAGCGTTCCTAAAGAAAATCTAAAACACCCCCACC