clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF043G14 | Sequence | 607 | 009318 (8) | ref|XP_006492975.1| | 3e-16 | PREDICTED: uncharacterized protein LOC102615780 isoform X1 [Citrus sinensis] | |||||
JMFS002B10 | Sequence | 433 | 009318 (8) | ref|XP_006360934.1| | 7e-07 | PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like [Solanum tu | |||||
JMFS050F04 | Sequence | 589 | 009318 (8) | ref|XP_006421067.1| | 5e-31 | hypothetical protein CICLE_v10004448mg [Citrus clementina] gb|ESR34307.1| hypoth | |||||
JMFS123A12 | Sequence | 572 | 009318 (8) | ref|XP_006421067.1| | 7e-27 | hypothetical protein CICLE_v10004448mg [Citrus clementina] gb|ESR34307.1| hypoth | |||||
JMFS132D06 | Sequence | 606 | 009318 (8) | ref|XP_007034240.1| | 2e-33 | RNA recognition motif-containing protein isoform 1 [Theobroma cacao] ref|XP_007 | |||||
JMSF022E10 | Sequence | 699 | 009318 (8) | ref|XP_007034240.1| | 3e-26 | RNA recognition motif-containing protein isoform 1 [Theobroma cacao] ref|XP_007 | |||||
JMSF042M19 | Sequence | 282 | 009318 (8) | ref|XP_007034240.1| | 2e-35 | RNA recognition motif-containing protein isoform 1 [Theobroma cacao] ref|XP_007 | 669 | 002959 (2) | |||
JMSF043M19 | Sequence | 280 | 009318 (8) | gb|KJB28110.1| | 3e-33 | hypothetical protein B456_005G028400 [Gossypium raimondii] | 507 | 002959 (2) |
This contig is upended
. : . : . : . : . : . :
JMSF042M19+ GCAATCCAGGAACTGCCCCAGACACAGAACCAGAGTAATTTGG
JMSF043M19+ AATCCAGGAACTGCCCCAGACACAGAACCAGAGTAATTTGG
____________________________________________________________
consensus GCAATCCAGGAACTGCCCCAGACACAGAACCAGAGTAATTTGG
. : . : . : . : . : . :
JMSF042M19+ CATATTTGGCATTGTCTGATTAACCATATTTGGAAATGTAGTTGATGGAGCTACACCCCA
JMSF043M19+ CATATTTGGCATTGTCTGATTAACCATATTTGGAAATGTAGTTGATGGAGCTACA-CCCA
JMSF022E10+ TTGGAAATGTAGTTGATGGAGCTACA-CCCA
____________________________________________________________
consensus CATATTTGGCATTGTCTGATTAACCATATTTGGAAATGTAGTTGATGGAGCTACA-CCCA
. : . : . : . : . : . :
JMSF042M19+ ATAGCCCTCCTGTAGATGTACCAGTGCTGAAGAAAACAGGGAATGGGCTACCCATAATTG
JMSF043M19+ ATAGCCCTCCTGTAGATGTACCAGTGCTGAAGAAAACAGGGAATGGGCTACCCATAATTG
JMFS050F04+ AGAAAACAGGGAATGGGCTACCCATAATTG
JMFS123A12+ GGCTACCCATAATTG
JMFS132D06+ ATGTACCAGTGCTGAAGAAAACAGGGAATGGGCTACCCATAATTG
JMFF043G14+ GGCTACCCATAATGG
JMSF022E10+ ATAGCCCTCCTGTAGATGTACCAGTGCTGAAGAAAACAGGGAATGGGCTACCCATAATTG
____________________________________________________________
consensus ATAGCCCTCCTGTAGATGTACCAGTGCTGAAGAAAACAGGGAATGGGCTACCCATAATTG
. : . : . : . : . : . :
JMSF042M19+ GCTTCCCATTGCACTCCACATAAACCATATAATTTCCTCGGCTGGGAACCACATAGGTCA
JMSF043M19+ GCTTCCCATTGCACTCCACATAAACCATATAATTTCCTCGGCTGGGAACCACATAGGTCA
JMFS050F04+ GCTTCCCATTGCACTCCACATAAACCATATAATTTCCTCGGCTGGGAACCACATAGGTCA
JMFS123A12+ GCTTCCCATTGCACTCCACATAAACCATATAATTTCCTCGGCTGGGAACCACATAGGTCA
JMFS132D06+ GCTTCCCATTGCACTCCACATAAACCATATAATTTCCTCGGCTGGGAACCACATAGGTCA
JMFF043G14+ CTTTCCCATTGCACTCCACATAAACCATAT-ATTTCCTCGGCT-GGAACCACATAGGTCA
JMSF022E10+ GCTTCCCATTGCACTCCACATAAACCATATAATTTCCTCGGCTGGGAACCACATAGGTCA
____________________________________________________________
consensus GCTTCCCATTGCACTCCACATAAACCATATAATTTCCTCGGCTGGGAACCACATAGGTCA
. : . : . : . : . : . :
JMSF042M19+ CACTATACGTCCCATCATTCATATCCTTAACAATCCCCTCCTGCTCGGAGCCGCCAACT
JMSF043M19+ CACTATACGTCCCATCATTCATATCCTTAACAATCCCCTCCTGCTCGGAGCCGCCAACT
JMFS050F04+ CACTATACGTCCCATCATTCATATCCTTAACAATCCCCTCCTGCTCGGAGCCGCCAACTC
JMFS123A12+ CACTATACGTCCCATCATTCATATCCTTAACAATCCCCTCCTGCTCGGAGCCGCCAACTC
JMFS132D06+ CACTATACGTCCCATCATTCATATCCTTAACAATCCCCTCCTGCTCGGAGCCGCCAACTC
JMFF043G14+ CACTATACGTCCCATCATTCATATCCTTAACAATCCCCTCCTGCTCGGAGCCGCCAACTC
JMSF022E10+ CACTATACGTCCCATCATTCATATCCTTAACAATCCCCTCCTGCTCGGAGCCGCCAACTC
____________________________________________________________
consensus CACTATACGTCCCATCATTCATATCCTTAACAATCCCCTCCTGCTCGGAGCCGCCAACTC
. : . : . : . : . : . :
JMFS050F04+ CCACTCCAGGAGCAACCTTAACCTTAACCTGCGCCCCACCGTGGAGCAATTTGCGACCGT
JMFS123A12+ CCACTCCAGGAGCAACCTTAACCTTAACCTGCGCCCCACCGTGGAGCAATTTGCGACCGT
JMFS132D06+ CCACTCCAGGAGCAACCTTAACCTTAACCTGCGCCCCACCGTGGAGCAATTTGCGACCGT
JMFS002B10+ TGCGCCCCACCGTGGAGCAATTTGCGACCGT
JMFF043G14+ CCACTCCAGGAGCAACCTTAACCTTAACCTGCGCCCCACCGTGGAGCAATTTGCGACCGT
JMSF022E10+ CCACTCCAGGAGCAACCTTAACCTTAACCTGCGCCCCACCGTGGAGCAATTTGCGACCGT
____________________________________________________________
consensus CCACTCCAGGAGCAACCTTAACCTTAACCTGCGCCCCACCGTGGAGCAATTTGCGACCGT
. : . : . : . : . : . :
JMFS050F04+ CTGCGTCCTTCGTAACAACCGTGAACGTGGAGGGTGCGCAGGCCGTCCCGCCAGCGATGC
JMFS123A12+ CTGCGTCCTTCGTAACAACCGTGAACGTGGAGGGTGCGCAGGCCGTCCCGCCAGCGATGC
JMFS132D06+ CTGCGTCCTTCGTAACAACCGTGAACGTGGAGGGTGCGCAGGCCGTCCCGCCAGCGATGC
JMFS002B10+ CTGCGTCCTTCGTAACAACCGTGAACGTGGAGGGTGCGCAGGCCGTCCCGCCAGCGATGC
JMFF043G14+ CTGCGTCCTTCGTAACAACCGTGAACGTGGAGGGTGCGCAGGCCGTCCCGCCAGCGATGC
JMSF022E10+ CTGCGTCCTTCGTAACAACCGTGAACGTGGAGGGTGCGCAGGCCGTCCCGCCAGCGATGC
____________________________________________________________
consensus CTGCGTCCTTCGTAACAACCGTGAACGTGGAGGGTGCGCAGGCCGTCCCGCCAGCGATGC
. : . : . : . : . : . :
JMFS050F04+ CAGGGCCGGCCGCCGTGCACTTGTTGGGGTCCAAGGGGCCGATCGGCTTCTTGGCCAGCC
JMFS123A12+ CAGGGCCGGCCGCCGTGCACTTGTTGGGGTCCAAGGGGCCGATCGGCTTCTTGGCCAGCC
JMFS132D06+ CAGGGCCGGCCGCCGTGCACTTGTTGGGGTCCAAGGGGCCGATCGGCTTCTTGGCCAGCC
JMFS002B10+ CAGGGCCGGCCGCCGTGCACTTGTTGGGGTCCAAGGGGCCGATCGGCTTCTTGGCCAGCC
JMFF043G14+ CAGGGCCGGCCGCCGTGCACTTGTTGGGGTCCAAGGGGCCGATCGGCTTCTTGGCCAGCC
JMSF022E10+ CAGGGCCGGCCGCCGTGCACTTGTTGGGGTCCAAGGGGCCGATCGGCTTCTTGGCCAGCC
____________________________________________________________
consensus CAGGGCCGGCCGCCGTGCACTTGTTGGGGTCCAAGGGGCCGATCGGCTTCTTGGCCAGCC
. : . : . : . : . : . :
JMFS050F04+ TCTCTTCGTCCTCCTCTTCCTCGTCATCACTATCCGAAGCTGCGGTAGCAGCTACGGTTG
JMFS123A12+ TCTCTTCGTCCTCCTCTTCCTCGTCATCACTATCCGAAGCTGCGGTAGCAGCTACGGTTG
JMFS132D06+ TCTCTTCGTCCTCCTCTTCCTCGTCATCACTATCCGAAGCTGCGGTAGCAGCTACGGTTG
JMFS002B10+ TCTCTTCGTCCTCCTCTTCCTCGTCATCACTATCCGAAGCTGCGGTAGCAGCTACGGTTG
JMFF043G14+ TCTCTTCGTCCTCCTCTTCCTCGTCATCACTATCCGAAGCTGCGGTAGCAGCTACGGTTG
JMSF022E10+ TCTCTTCGTCCTCCTCTTCCTCGTCATCACTATCCGAAGCTGCGGTAGCAGCTACGGTTG
____________________________________________________________
consensus TCTCTTCGTCCTCCTCTTCCTCGTCATCACTATCCGAAGCTGCGGTAGCAGCTACGGTTG
. : . : . : . : . : . :
JMFS050F04+ AGGGGTCAACGTTTTTGAAAGTAGCCTCGAAGGCAGCCTTCGCGGCGGCAGCTTTCTCGG
JMFS123A12+ AGGGGTCAACGTTTTTGAAAGTAGCCTCGAAGGCAGCCTTCGCGGCGGCAGCTTTCTCGG
JMFS132D06+ AGGGGTCAACGTTTTTGAAAGTAGCCTCGAAGGCAGCCTTCGCGGCGGCAGCTTTCTCGG
JMFS002B10+ AGGGGTCAACGTTTTTGAAAGTAGCCTCGAAGGCAGCCTTCGCGGCGGCAGCTTTCTCGG
JMFF043G14+ AGGGGTCAACGTTTTTGAAAGTAGCCTCGAAGGCAGCCTTCGCGGCGGCAGCTTTCTCGG
JMSF022E10+ AGGGGTCAACGTTTTTGAAAGTAGCCTCGAAGGCAGCCTTCGCGGCGGCAGCTTTCTCGG
____________________________________________________________
consensus AGGGGTCAACGTTTTTGAAAGTAGCCTCGAAGGCAGCCTTCGCGGCGGCAGCTTTCTCGG
. : . : . : . : . : . :
JMFS050F04+ CTTCACTCTTCAACTTGGCCTCCTCGGCATGTTTTACCCATATCGGCTTCGCCGCCGCCG
JMFS123A12+ CTTCACTCTTCAACTTGGCCTCCTCGGCATGTTTTACCCATATCGGCTTCGCCGCCGCCG
JMFS132D06+ CTTCACTCTTCAACTTGGCCTCCTCGGCATGTTTTACCCATATCGGCTTCGCCGCCGCCG
JMFS002B10+ CTTCACTCTTCAACTTGGCCTCCTCGGCATGTTTTACCCATATCGGCTTCGCCGCCGCCG
JMFF043G14+ CTTCACTCTTCAACTTGGCCTCCTCGGCATGTTTTACCCATATCGGCTTCGCCGCCGCCG
JMSF022E10+ CTTCACTCTTCAACTTGGCCTCCTCGGCATGTTTTACCCATATCGGCTTCGCCGCCGCCG
____________________________________________________________
consensus CTTCACTCTTCAACTTGGCCTCCTCGGCATGTTTTACCCATATCGGCTTCGCCGCCGCCG
. : . : . : . : . : . :
JMFS050F04+ TCGCCGCCGTCGAATTGCTGTTGCGATCCGCCATGAAGGACAAGCAATTCGCCGTTGCCC
JMFS123A12+ TCGCCGCCGTCGAATTGCTGTTGCGATCCGCCATGAAGGACAAGCAATTCGCCGTTGCCC
JMFS132D06+ TCGCCGCCGTCGAATTGCTGTTGCGATCCGCCATGAAGGACAAGCAATTCGCCGTTGCCC
JMFS002B10+ TCGCCGCCGTCGAATTGCTGTTGCGATCCGCCATGAAGGACAAGCAATTCGCCGTTGCCC
JMFF043G14+ TCGCCGCCGTCGAATTGCTGTTGCGATCCGCCATGAAGGACAAGCAATTCGCCGTTGCCC
JMSF022E10+ TCGCCGCCGTCGAATTGCTGTTGCGATCCGCCATGAAGGACAAGCAATTCGCCGTTGCCC
____________________________________________________________
consensus TCGCCGCCGTCGAATTGCTGTTGCGATCCGCCATGAAGGACAAGCAATTCGCCGTTGCCC
. : . : . : . : . : . :
JMFS050F04+ AAACCCTAATGTT
JMFS123A12+ AAACCCTAATGTTGAGA
JMFS132D06+ AAACCCTAATGTTGAGAATCA
JMFS002B10+ AAACCCTAATGTTGAGAATCACTTAGATTTTACCCAAAACGG
JMFF043G14+ AAACCCTAATGTTGAGAATCACTTAGATTTTACCCAAAACGGGGGAACGAGGAG
JMSF022E10+ AAACCCTAATGTTGAGAATCACTTAGATTTTACCCAAAACGGGGGAACGAGGAGTGAACC
____________________________________________________________
consensus AAACCCTAATGTTGAGAATCACTTAGATTTTACCCAAAACGGGGGAACGAGGAGTGAACC