Contig 009318:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043G14Sequence607009318 (8)ref|XP_006492975.1|3e-16PREDICTED: uncharacterized protein LOC102615780 isoform X1 [Citrus sinensis]
JMFS002B10Sequence433009318 (8)ref|XP_006360934.1|7e-07PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like [Solanum tu
JMFS050F04Sequence589009318 (8)ref|XP_006421067.1|5e-31hypothetical protein CICLE_v10004448mg [Citrus clementina] gb|ESR34307.1| hypoth
JMFS123A12Sequence572009318 (8)ref|XP_006421067.1|7e-27hypothetical protein CICLE_v10004448mg [Citrus clementina] gb|ESR34307.1| hypoth
JMFS132D06Sequence606009318 (8)ref|XP_007034240.1|2e-33RNA recognition motif-containing protein isoform 1 [Theobroma cacao] ref|XP_007
JMSF022E10Sequence699009318 (8)ref|XP_007034240.1|3e-26RNA recognition motif-containing protein isoform 1 [Theobroma cacao] ref|XP_007
JMSF042M19Sequence282009318 (8)ref|XP_007034240.1|2e-35RNA recognition motif-containing protein isoform 1 [Theobroma cacao] ref|XP_007669002959 (2)
JMSF043M19Sequence280009318 (8)gb|KJB28110.1|3e-33hypothetical protein B456_005G028400 [Gossypium raimondii]507002959 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF042M19+ GCAATCCAGGAACTGCCCCAGACACAGAACCAGAGTAATTTGG
JMSF043M19+ AATCCAGGAACTGCCCCAGACACAGAACCAGAGTAATTTGG
                      ____________________________________________________________
consensus GCAATCCAGGAACTGCCCCAGACACAGAACCAGAGTAATTTGG
 
. : . : . : . : . : . :
JMSF042M19+ CATATTTGGCATTGTCTGATTAACCATATTTGGAAATGTAGTTGATGGAGCTACACCCCA
JMSF043M19+ CATATTTGGCATTGTCTGATTAACCATATTTGGAAATGTAGTTGATGGAGCTACA-CCCA
JMSF022E10+ TTGGAAATGTAGTTGATGGAGCTACA-CCCA
                      ____________________________________________________________
consensus CATATTTGGCATTGTCTGATTAACCATATTTGGAAATGTAGTTGATGGAGCTACA-CCCA
 
. : . : . : . : . : . :
JMSF042M19+ ATAGCCCTCCTGTAGATGTACCAGTGCTGAAGAAAACAGGGAATGGGCTACCCATAATTG
JMSF043M19+ ATAGCCCTCCTGTAGATGTACCAGTGCTGAAGAAAACAGGGAATGGGCTACCCATAATTG
JMFS050F04+ AGAAAACAGGGAATGGGCTACCCATAATTG
JMFS123A12+ GGCTACCCATAATTG
JMFS132D06+ ATGTACCAGTGCTGAAGAAAACAGGGAATGGGCTACCCATAATTG
JMFF043G14+ GGCTACCCATAATGG
JMSF022E10+ ATAGCCCTCCTGTAGATGTACCAGTGCTGAAGAAAACAGGGAATGGGCTACCCATAATTG
                      ____________________________________________________________
consensus ATAGCCCTCCTGTAGATGTACCAGTGCTGAAGAAAACAGGGAATGGGCTACCCATAATTG
 
. : . : . : . : . : . :
JMSF042M19+ GCTTCCCATTGCACTCCACATAAACCATATAATTTCCTCGGCTGGGAACCACATAGGTCA
JMSF043M19+ GCTTCCCATTGCACTCCACATAAACCATATAATTTCCTCGGCTGGGAACCACATAGGTCA
JMFS050F04+ GCTTCCCATTGCACTCCACATAAACCATATAATTTCCTCGGCTGGGAACCACATAGGTCA
JMFS123A12+ GCTTCCCATTGCACTCCACATAAACCATATAATTTCCTCGGCTGGGAACCACATAGGTCA
JMFS132D06+ GCTTCCCATTGCACTCCACATAAACCATATAATTTCCTCGGCTGGGAACCACATAGGTCA
JMFF043G14+ CTTTCCCATTGCACTCCACATAAACCATAT-ATTTCCTCGGCT-GGAACCACATAGGTCA
JMSF022E10+ GCTTCCCATTGCACTCCACATAAACCATATAATTTCCTCGGCTGGGAACCACATAGGTCA
                      ____________________________________________________________
consensus GCTTCCCATTGCACTCCACATAAACCATATAATTTCCTCGGCTGGGAACCACATAGGTCA
 
. : . : . : . : . : . :
JMSF042M19+ CACTATACGTCCCATCATTCATATCCTTAACAATCCCCTCCTGCTCGGAGCCGCCAACT
JMSF043M19+ CACTATACGTCCCATCATTCATATCCTTAACAATCCCCTCCTGCTCGGAGCCGCCAACT
JMFS050F04+ CACTATACGTCCCATCATTCATATCCTTAACAATCCCCTCCTGCTCGGAGCCGCCAACTC
JMFS123A12+ CACTATACGTCCCATCATTCATATCCTTAACAATCCCCTCCTGCTCGGAGCCGCCAACTC
JMFS132D06+ CACTATACGTCCCATCATTCATATCCTTAACAATCCCCTCCTGCTCGGAGCCGCCAACTC
JMFF043G14+ CACTATACGTCCCATCATTCATATCCTTAACAATCCCCTCCTGCTCGGAGCCGCCAACTC
JMSF022E10+ CACTATACGTCCCATCATTCATATCCTTAACAATCCCCTCCTGCTCGGAGCCGCCAACTC
                      ____________________________________________________________
consensus CACTATACGTCCCATCATTCATATCCTTAACAATCCCCTCCTGCTCGGAGCCGCCAACTC
 
. : . : . : . : . : . :
JMFS050F04+ CCACTCCAGGAGCAACCTTAACCTTAACCTGCGCCCCACCGTGGAGCAATTTGCGACCGT
JMFS123A12+ CCACTCCAGGAGCAACCTTAACCTTAACCTGCGCCCCACCGTGGAGCAATTTGCGACCGT
JMFS132D06+ CCACTCCAGGAGCAACCTTAACCTTAACCTGCGCCCCACCGTGGAGCAATTTGCGACCGT
JMFS002B10+ TGCGCCCCACCGTGGAGCAATTTGCGACCGT
JMFF043G14+ CCACTCCAGGAGCAACCTTAACCTTAACCTGCGCCCCACCGTGGAGCAATTTGCGACCGT
JMSF022E10+ CCACTCCAGGAGCAACCTTAACCTTAACCTGCGCCCCACCGTGGAGCAATTTGCGACCGT
                      ____________________________________________________________
consensus CCACTCCAGGAGCAACCTTAACCTTAACCTGCGCCCCACCGTGGAGCAATTTGCGACCGT
 
. : . : . : . : . : . :
JMFS050F04+ CTGCGTCCTTCGTAACAACCGTGAACGTGGAGGGTGCGCAGGCCGTCCCGCCAGCGATGC
JMFS123A12+ CTGCGTCCTTCGTAACAACCGTGAACGTGGAGGGTGCGCAGGCCGTCCCGCCAGCGATGC
JMFS132D06+ CTGCGTCCTTCGTAACAACCGTGAACGTGGAGGGTGCGCAGGCCGTCCCGCCAGCGATGC
JMFS002B10+ CTGCGTCCTTCGTAACAACCGTGAACGTGGAGGGTGCGCAGGCCGTCCCGCCAGCGATGC
JMFF043G14+ CTGCGTCCTTCGTAACAACCGTGAACGTGGAGGGTGCGCAGGCCGTCCCGCCAGCGATGC
JMSF022E10+ CTGCGTCCTTCGTAACAACCGTGAACGTGGAGGGTGCGCAGGCCGTCCCGCCAGCGATGC
                      ____________________________________________________________
consensus CTGCGTCCTTCGTAACAACCGTGAACGTGGAGGGTGCGCAGGCCGTCCCGCCAGCGATGC
 
. : . : . : . : . : . :
JMFS050F04+ CAGGGCCGGCCGCCGTGCACTTGTTGGGGTCCAAGGGGCCGATCGGCTTCTTGGCCAGCC
JMFS123A12+ CAGGGCCGGCCGCCGTGCACTTGTTGGGGTCCAAGGGGCCGATCGGCTTCTTGGCCAGCC
JMFS132D06+ CAGGGCCGGCCGCCGTGCACTTGTTGGGGTCCAAGGGGCCGATCGGCTTCTTGGCCAGCC
JMFS002B10+ CAGGGCCGGCCGCCGTGCACTTGTTGGGGTCCAAGGGGCCGATCGGCTTCTTGGCCAGCC
JMFF043G14+ CAGGGCCGGCCGCCGTGCACTTGTTGGGGTCCAAGGGGCCGATCGGCTTCTTGGCCAGCC
JMSF022E10+ CAGGGCCGGCCGCCGTGCACTTGTTGGGGTCCAAGGGGCCGATCGGCTTCTTGGCCAGCC
                      ____________________________________________________________
consensus CAGGGCCGGCCGCCGTGCACTTGTTGGGGTCCAAGGGGCCGATCGGCTTCTTGGCCAGCC
 
. : . : . : . : . : . :
JMFS050F04+ TCTCTTCGTCCTCCTCTTCCTCGTCATCACTATCCGAAGCTGCGGTAGCAGCTACGGTTG
JMFS123A12+ TCTCTTCGTCCTCCTCTTCCTCGTCATCACTATCCGAAGCTGCGGTAGCAGCTACGGTTG
JMFS132D06+ TCTCTTCGTCCTCCTCTTCCTCGTCATCACTATCCGAAGCTGCGGTAGCAGCTACGGTTG
JMFS002B10+ TCTCTTCGTCCTCCTCTTCCTCGTCATCACTATCCGAAGCTGCGGTAGCAGCTACGGTTG
JMFF043G14+ TCTCTTCGTCCTCCTCTTCCTCGTCATCACTATCCGAAGCTGCGGTAGCAGCTACGGTTG
JMSF022E10+ TCTCTTCGTCCTCCTCTTCCTCGTCATCACTATCCGAAGCTGCGGTAGCAGCTACGGTTG
                      ____________________________________________________________
consensus TCTCTTCGTCCTCCTCTTCCTCGTCATCACTATCCGAAGCTGCGGTAGCAGCTACGGTTG
 
. : . : . : . : . : . :
JMFS050F04+ AGGGGTCAACGTTTTTGAAAGTAGCCTCGAAGGCAGCCTTCGCGGCGGCAGCTTTCTCGG
JMFS123A12+ AGGGGTCAACGTTTTTGAAAGTAGCCTCGAAGGCAGCCTTCGCGGCGGCAGCTTTCTCGG
JMFS132D06+ AGGGGTCAACGTTTTTGAAAGTAGCCTCGAAGGCAGCCTTCGCGGCGGCAGCTTTCTCGG
JMFS002B10+ AGGGGTCAACGTTTTTGAAAGTAGCCTCGAAGGCAGCCTTCGCGGCGGCAGCTTTCTCGG
JMFF043G14+ AGGGGTCAACGTTTTTGAAAGTAGCCTCGAAGGCAGCCTTCGCGGCGGCAGCTTTCTCGG
JMSF022E10+ AGGGGTCAACGTTTTTGAAAGTAGCCTCGAAGGCAGCCTTCGCGGCGGCAGCTTTCTCGG
                      ____________________________________________________________
consensus AGGGGTCAACGTTTTTGAAAGTAGCCTCGAAGGCAGCCTTCGCGGCGGCAGCTTTCTCGG
 
. : . : . : . : . : . :
JMFS050F04+ CTTCACTCTTCAACTTGGCCTCCTCGGCATGTTTTACCCATATCGGCTTCGCCGCCGCCG
JMFS123A12+ CTTCACTCTTCAACTTGGCCTCCTCGGCATGTTTTACCCATATCGGCTTCGCCGCCGCCG
JMFS132D06+ CTTCACTCTTCAACTTGGCCTCCTCGGCATGTTTTACCCATATCGGCTTCGCCGCCGCCG
JMFS002B10+ CTTCACTCTTCAACTTGGCCTCCTCGGCATGTTTTACCCATATCGGCTTCGCCGCCGCCG
JMFF043G14+ CTTCACTCTTCAACTTGGCCTCCTCGGCATGTTTTACCCATATCGGCTTCGCCGCCGCCG
JMSF022E10+ CTTCACTCTTCAACTTGGCCTCCTCGGCATGTTTTACCCATATCGGCTTCGCCGCCGCCG
                      ____________________________________________________________
consensus CTTCACTCTTCAACTTGGCCTCCTCGGCATGTTTTACCCATATCGGCTTCGCCGCCGCCG
 
. : . : . : . : . : . :
JMFS050F04+ TCGCCGCCGTCGAATTGCTGTTGCGATCCGCCATGAAGGACAAGCAATTCGCCGTTGCCC
JMFS123A12+ TCGCCGCCGTCGAATTGCTGTTGCGATCCGCCATGAAGGACAAGCAATTCGCCGTTGCCC
JMFS132D06+ TCGCCGCCGTCGAATTGCTGTTGCGATCCGCCATGAAGGACAAGCAATTCGCCGTTGCCC
JMFS002B10+ TCGCCGCCGTCGAATTGCTGTTGCGATCCGCCATGAAGGACAAGCAATTCGCCGTTGCCC
JMFF043G14+ TCGCCGCCGTCGAATTGCTGTTGCGATCCGCCATGAAGGACAAGCAATTCGCCGTTGCCC
JMSF022E10+ TCGCCGCCGTCGAATTGCTGTTGCGATCCGCCATGAAGGACAAGCAATTCGCCGTTGCCC
                      ____________________________________________________________
consensus TCGCCGCCGTCGAATTGCTGTTGCGATCCGCCATGAAGGACAAGCAATTCGCCGTTGCCC
 
. : . : . : . : . : . :
JMFS050F04+ AAACCCTAATGTT
JMFS123A12+ AAACCCTAATGTTGAGA
JMFS132D06+ AAACCCTAATGTTGAGAATCA
JMFS002B10+ AAACCCTAATGTTGAGAATCACTTAGATTTTACCCAAAACGG
JMFF043G14+ AAACCCTAATGTTGAGAATCACTTAGATTTTACCCAAAACGGGGGAACGAGGAG
JMSF022E10+ AAACCCTAATGTTGAGAATCACTTAGATTTTACCCAAAACGGGGGAACGAGGAGTGAACC
                      ____________________________________________________________
consensus AAACCCTAATGTTGAGAATCACTTAGATTTTACCCAAAACGGGGGAACGAGGAGTGAACC