| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF033O14 | Sequence | 407 | 009316 (6) | ref|XP_010065507.1| | 9e-39 | PREDICTED: pinin [Eucalyptus grandis] gb|KCW63027.1| hypothetical protein EUGRSU | 735 | 001964 (7) | gb|KDP43620.1| | 3e-44 | hypothetical protein JCGZ_16907 [Jatropha curcas] |
| JMFF047E02 | Sequence | 475 | 009316 (6) | ref|XP_010065507.1| | 3e-45 | PREDICTED: pinin [Eucalyptus grandis] gb|KCW63027.1| hypothetical protein EUGRSU | |||||
| JMSF021O17 | Sequence | 615 | 009316 (6) | ref|XP_011087796.1| | 2e-70 | PREDICTED: pinin [Sesamum indicum] | 781 | 001964 (7) | ref|XP_011087796.1| | 5e-71 | PREDICTED: pinin [Sesamum indicum] |
| JMSF035G19 | Sequence | 654 | 009316 (6) | ref|XP_011087796.1| | 4e-84 | PREDICTED: pinin [Sesamum indicum] | 720 | 001964 (7) | ref|XP_011087796.1| | 1e-65 | PREDICTED: pinin [Sesamum indicum] |
| JMSF036F11 | Sequence | 596 | 009316 (6) | ref|XP_011087796.1| | 3e-70 | PREDICTED: pinin [Sesamum indicum] | 724 | 001964 (7) | ref|XP_011087796.1| | 2e-61 | PREDICTED: pinin [Sesamum indicum] |
| JMSF050P19 | Sequence | 591 | 009316 (6) | ref|XP_011087796.1| | 2e-68 | PREDICTED: pinin [Sesamum indicum] | 723 | 001964 (7) | ref|XP_011087796.1| | 2e-61 | PREDICTED: pinin [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMSF035G19+ TTCAAAGAATC
____________________________________________________________
consensus TTCAAAGAATC
. : . : . : . : . : . :
JMSF035G19+ TGACCTCCGCATATATGCTTCAGAGCCAGAAAGTTGCATGTCTTCTTTCCTGAATTTCTC
JMSF050P19+ AATTTCTC
JMSF036F11+ AATTTCTC
JMSF021O17+ AATTTCTC
____________________________________________________________
consensus TGACCTCCGCATATATGCTTCAGAGCCAGAAAGTTGCATGTCTTCTTTCCTGAATTTCTC
. : . : . : . : . : . :
JMSF035G19+ TAATGTCCCAAGAAGTTGGCCCAGCATTCTCTTATTTCTACTAACCAATTTAGGATCTTC
JMSF050P19+ TAATGTCCCAAGAAGTTGGCCCAGCATTCTCTTATTTCTACTAACCAATTTAGGATCTTC
JMSF036F11+ TAATGTCCCAAGAAGTTGGCCCAGCATTCTCTTATTTCTACTAACCAATTTAGGATCTTC
JMSF021O17+ TAATGTCCCCAGAAGTTGGCCCAGCATTCTCTTATTTCCACTAACCAATTTAGGATCTTC
____________________________________________________________
consensus TAATGTCCCAAGAAGTTGGCCCAGCATTCTCTTATTTCTACTAACCAATTTAGGATCTTC
. : . : . : . : . : . :
JMSF035G19+ ATCTTTTGGCAACACTCTTGGAACATGCTCTGGCGGAGGAATATCAGAGCCCATCTTGAA
JMFF047E02+ TCAGAGCCCATCTTGAA
JMSF050P19+ ATCTTTTGGCAACACTCTTGGAACATGCTCTGGCGGAGGAATATCAGAGCCCATCTTGAA
JMSF036F11+ ATCTTTTGGCAACACTCTTGGAACATGCTCTGGCGGAGGAATATCAGAGCCCATCTTGAA
JMSF021O17+ ATCTTTTGGCAACACTCTTGGAACATGCTCTGGCGGAGGAATATCAGAGCCCATCTTGAA
____________________________________________________________
consensus ATCTTTTGGCAACACTCTTGGAACATGCTCTGGCGGAGGAATATCAGAGCCCATCTTGAA
. : . : . : . : . : . :
JMSF035G19+ GGTCCTTTGATTCCCATCCCTCCTAGACCAGGTTCCTGGCTTGCTCTCACCCTGTGTTGC
JMFF047E02+ GGTCCTTTGATTCCCATCCCTCCTAGACCAGGTTCCTGGCTTGCTCTCACCCTGTGTTGC
JMSF050P19+ GGTCCTTTGATTCCCATCCCTCCTAGACCAGGTTCCTGGCTTGCTCTCACCCTGTGTTGC
JMSF036F11+ GGTCCTTTGATTCCCATCCCTCCTAGACCAGGTTCCTGGCTTGCTCTCACCCTGTGTTGC
JMSF021O17+ GGTCCTTTGATTCCCATCCCTCCTAGACCAGGTTCCTGGCTTGCTCTCACCCTGTGTTGC
____________________________________________________________
consensus GGTCCTTTGATTCCCATCCCTCCTAGACCAGGTTCCTGGCTTGCTCTCACCCTGTGTTGC
. : . : . : . : . : . :
JMSF035G19+ AATTGTTTTTCCTGAGCTTTCTTCATAAACAGAGTCCTTCATCTCTTTGGGAGTTTCAGG
JMFF047E02+ AATTGTTTTTCCTGAGCTTTCTTCATAAACAGAGTCCTTCATCTCTTTGGGAGTTTCAGG
JMSF050P19+ AATTGTTTTTCCTGAGCTTTCTTCATAAACAGAGTCCTTCATCTCTTTGGGAGTTTCAGG
JMSF036F11+ AATTGTTTTTCCTGAGCTTTCTTCATAAACAGAGTCCTTCATCTCTTTGGGAGTTTCAGG
JMFF033O14+ TGAGCTTTCTTCATAAACAGAGTCCTTCATCTCTTTGGGAGTTTCAGG
JMSF021O17+ AATTGTTTTTCCTGAGCTTTCTTCATAAACAGAGTCCTTCATCTCTTTGGGAGTTTCAGG
____________________________________________________________
consensus AATTGTTTTTCCTGAGCTTTCTTCATAAACAGAGTCCTTCATCTCTTTGGGAGTTTCAGG
. : . : . : . : . : . :
JMSF035G19+ AGTGTCCTCCACAATCTCCCCATCTTCAATCTTAACTACTGTAGACAATAATCTCTTTTT
JMFF047E02+ AGTGTCCTCCACAATCTCCCCATCTTCAATCTTAACTACTGTAGACAATAATCTCTTTTT
JMSF050P19+ AGTGTCCTCCACAATCTCCCCATCTTCAATCTTAACTACTGTAGACAATAATCTCTTTTT
JMSF036F11+ AGTGTCCTCCACAATCTCCCCATCTTCAATCTTAACTACTGTAGACAATAATCTCTTTTT
JMFF033O14+ AGTGTCCTCCACAATCTCCCCATCTTCAATCTTAACTACTGTAGACAATAATCTCTTTTT
JMSF021O17+ AGTGTCCTCCACAATCTCCCCATCTTCAATCTTAACTACTGTAGACAATAATCTCTTTTT
____________________________________________________________
consensus AGTGTCCTCCACAATCTCCCCATCTTCAATCTTAACTACTGTAGACAATAATCTCTTTTT
. : . : . : . : . : . :
JMSF035G19+ TGGCATCGGCTGATCCTCAGCATCATTCCTCTCGGCCGGTCTGACAAGGCCACGCTGGCG
JMFF047E02+ TGGCATCGGCTGATCCTCAGCATCATTCCTCTCGGCCGGTCTGACAAGGCCACGCTGGCG
JMSF050P19+ TGGCATCGGCTGATCCTCAGCATCATTCCTCTCGGCCGGTCTGACAAGGCCACGCTGGCG
JMSF036F11+ TGGCATCGGCTGATCCTCAGCATCATTCCTCTCGGCCGGTCTGACAAGGCCACGCTGGCG
JMFF033O14+ TGGCATCGGCTGATCCTCAGCATCATTCCTCTCGGCCGGTCTGACAAGGCCACGCTGGCG
JMSF021O17+ TGGCATCGGCTGATCCTCAGCATCATTCCTCTCGGCCGGCCTGACAAGGCCACGCTGGCG
____________________________________________________________
consensus TGGCATCGGCTGATCCTCAGCATCATTCCTCTCGGCCGGTCTGACAAGGCCACGCTGGCG
. : . : . : . : . : . :
JMSF035G19+ GCCGCCGTTGGCGACGAAATTCCGAGGACCGGAGCCAGTAAATCCACCGCGGCGAATGCC
JMFF047E02+ GCCGCCGTTGGCGACGAAATTCCGAGGACCGGAGCCAGTAAATCCACCGCGGCGAATGCC
JMSF050P19+ GCCGCCGTTGGCGACGAAATTCCGAGGACCGGAGCCAGTAAATCCACCGCGGCGAATGCC
JMSF036F11+ GCCGCCGTTGGCGACGAAATTCCGAGGACCGGAGCCAGTAAATCCACCGCGGCGAATGCC
JMFF033O14+ GCCGCCGTTGGCGANGAAATTCCGAGGACCGGAGCCAGTAAATCCACCGCGGCGAATGCC
JMSF021O17+ GCCGCCGTTGGCGACGAAATTCCGAGGACCGGAGCCAGTAAATCCACCGCGGCGAATGCC
____________________________________________________________
consensus GCCGCCGTTGGCGACGAAATTCCGAGGACCGGAGCCAGTAAATCCACCGCGGCGAATGCC
. : . : . : . : . : . :
JMSF035G19+ TCTTGGATCGCGAAGCCGTTCAGTTATCTCGCGTCGTTGACGATTGAGTTCATCAATTTC
JMFF047E02+ TCTTGGATCGCGAAGCCGTTCAGTTATCTCGCGTCGTTGACGATTGAGTTCATCAATTTC
JMSF050P19+ TCTTGGATCGCGAAGCCGTTCAGTTATCTCGCGTCGTTGACGATTGAGTTCATCAATTTC
JMSF036F11+ TCTTGGATCGCGAAGCCGTTCAGTTATCTCGCGTCGTTGACGATTGAGTTCATCAATTTC
JMFF033O14+ TCTTGGATCGCGAAGCCGTTCAGTTATCTCGCGTCGTNGACGATTGAGTTCATCAATTTC
JMSF021O17+ TCTTGGATCGCGAAGCCGTTCAGTTATCTCGCGTCGTTGACGATTGAGTTCATCAATTTC
____________________________________________________________
consensus TCTTGGATCGCGAAGCCGTTCAGTTATCTCGCGTCGTTGACGATTGAGTTCATCAATTTC
. : . : . : . : . : . :
JMSF035G19+ CTTTCGCAGCTCCTCCTCCGTCTTCTCCGCGACGGCGCTTGCCATTGTTTTGGCTCTGAG
JMFF047E02+ CTTTCGCAGCTCCTCCTCCGTCTTCTCCGCGACGGCGCTTGCCATTGTTTTGGCTCTGAG
JMSF050P19+ CTTTCGCAGCTCCTCCTCCGTCTTCTCCGCGACGGCGCTTGCCATTGTTTTGGCTCTGAG
JMSF036F11+ CTTTCGCAGCTCCTCCTCCGTCTTCTCCGCGACGGCGCTTGCCATTGTTTTGGCTCTGAG
JMFF033O14+ CTTTCGCAGCTCCTCCTCCGTCTTCTCCGCGACGGCGCTTGCCATTGTTTTGGCTATGAG
JMSF021O17+ CTTTCGCAGCTCCTCCTCCGTCTTCTCCGCGACGGCGCTTGCCATTGTTTTGGCTCTGAG
____________________________________________________________
consensus CTTTCGCAGCTCCTCCTCCGTCTTCTCCGCGACGGCGCTTGCCATTGTTTTGGCTCTGAG
. : . : . : . : . : . :
JMSF035G19+ CAACACTCCGTTCTCTCTGCGACTCTCGTTTTTGCACCG
JMFF047E02+ CAACACTCCGTTCTCTCTGCGACTCTCGTTTTTCCACC
JMSF050P19+ CAACACTCCGTTCTCTCTGCGACTCTCGTTTTTGCACCG
JMSF036F11+ CAACACTCCGTTCTCTCTGCGACTCTCGTTTTTGCACCG
JMFF033O14+ CAACACTCCGTTCTCTCTGCGACTCTCGTTTNTGCNCCGTNTACCAAAAAACCCTCGAC
JMSF021O17+ CAACACTCCGTTCTCTCTGCGACTCTCGTTTTTGCACCGTCTACCAAAAAACCCTCGACT
____________________________________________________________
consensus CAACACTCCGTTCTCTCTGCGACTCTCGTTTTTGCACCGTCTACCAAAAAACCCTCGACT