Contig 009316:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033O14Sequence407009316 (6)ref|XP_010065507.1|9e-39PREDICTED: pinin [Eucalyptus grandis] gb|KCW63027.1| hypothetical protein EUGRSU735001964 (7)gb|KDP43620.1|3e-44hypothetical protein JCGZ_16907 [Jatropha curcas]
JMFF047E02Sequence475009316 (6)ref|XP_010065507.1|3e-45PREDICTED: pinin [Eucalyptus grandis] gb|KCW63027.1| hypothetical protein EUGRSU
JMSF021O17Sequence615009316 (6)ref|XP_011087796.1|2e-70PREDICTED: pinin [Sesamum indicum]781001964 (7)ref|XP_011087796.1|5e-71PREDICTED: pinin [Sesamum indicum]
JMSF035G19Sequence654009316 (6)ref|XP_011087796.1|4e-84PREDICTED: pinin [Sesamum indicum]720001964 (7)ref|XP_011087796.1|1e-65PREDICTED: pinin [Sesamum indicum]
JMSF036F11Sequence596009316 (6)ref|XP_011087796.1|3e-70PREDICTED: pinin [Sesamum indicum]724001964 (7)ref|XP_011087796.1|2e-61PREDICTED: pinin [Sesamum indicum]
JMSF050P19Sequence591009316 (6)ref|XP_011087796.1|2e-68PREDICTED: pinin [Sesamum indicum]723001964 (7)ref|XP_011087796.1|2e-61PREDICTED: pinin [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF035G19+ TTCAAAGAATC
                      ____________________________________________________________
consensus TTCAAAGAATC
 
. : . : . : . : . : . :
JMSF035G19+ TGACCTCCGCATATATGCTTCAGAGCCAGAAAGTTGCATGTCTTCTTTCCTGAATTTCTC
JMSF050P19+ AATTTCTC
JMSF036F11+ AATTTCTC
JMSF021O17+ AATTTCTC
                      ____________________________________________________________
consensus TGACCTCCGCATATATGCTTCAGAGCCAGAAAGTTGCATGTCTTCTTTCCTGAATTTCTC
 
. : . : . : . : . : . :
JMSF035G19+ TAATGTCCCAAGAAGTTGGCCCAGCATTCTCTTATTTCTACTAACCAATTTAGGATCTTC
JMSF050P19+ TAATGTCCCAAGAAGTTGGCCCAGCATTCTCTTATTTCTACTAACCAATTTAGGATCTTC
JMSF036F11+ TAATGTCCCAAGAAGTTGGCCCAGCATTCTCTTATTTCTACTAACCAATTTAGGATCTTC
JMSF021O17+ TAATGTCCCCAGAAGTTGGCCCAGCATTCTCTTATTTCCACTAACCAATTTAGGATCTTC
                      ____________________________________________________________
consensus TAATGTCCCAAGAAGTTGGCCCAGCATTCTCTTATTTCTACTAACCAATTTAGGATCTTC
 
. : . : . : . : . : . :
JMSF035G19+ ATCTTTTGGCAACACTCTTGGAACATGCTCTGGCGGAGGAATATCAGAGCCCATCTTGAA
JMFF047E02+ TCAGAGCCCATCTTGAA
JMSF050P19+ ATCTTTTGGCAACACTCTTGGAACATGCTCTGGCGGAGGAATATCAGAGCCCATCTTGAA
JMSF036F11+ ATCTTTTGGCAACACTCTTGGAACATGCTCTGGCGGAGGAATATCAGAGCCCATCTTGAA
JMSF021O17+ ATCTTTTGGCAACACTCTTGGAACATGCTCTGGCGGAGGAATATCAGAGCCCATCTTGAA
                      ____________________________________________________________
consensus ATCTTTTGGCAACACTCTTGGAACATGCTCTGGCGGAGGAATATCAGAGCCCATCTTGAA
 
. : . : . : . : . : . :
JMSF035G19+ GGTCCTTTGATTCCCATCCCTCCTAGACCAGGTTCCTGGCTTGCTCTCACCCTGTGTTGC
JMFF047E02+ GGTCCTTTGATTCCCATCCCTCCTAGACCAGGTTCCTGGCTTGCTCTCACCCTGTGTTGC
JMSF050P19+ GGTCCTTTGATTCCCATCCCTCCTAGACCAGGTTCCTGGCTTGCTCTCACCCTGTGTTGC
JMSF036F11+ GGTCCTTTGATTCCCATCCCTCCTAGACCAGGTTCCTGGCTTGCTCTCACCCTGTGTTGC
JMSF021O17+ GGTCCTTTGATTCCCATCCCTCCTAGACCAGGTTCCTGGCTTGCTCTCACCCTGTGTTGC
                      ____________________________________________________________
consensus GGTCCTTTGATTCCCATCCCTCCTAGACCAGGTTCCTGGCTTGCTCTCACCCTGTGTTGC
 
. : . : . : . : . : . :
JMSF035G19+ AATTGTTTTTCCTGAGCTTTCTTCATAAACAGAGTCCTTCATCTCTTTGGGAGTTTCAGG
JMFF047E02+ AATTGTTTTTCCTGAGCTTTCTTCATAAACAGAGTCCTTCATCTCTTTGGGAGTTTCAGG
JMSF050P19+ AATTGTTTTTCCTGAGCTTTCTTCATAAACAGAGTCCTTCATCTCTTTGGGAGTTTCAGG
JMSF036F11+ AATTGTTTTTCCTGAGCTTTCTTCATAAACAGAGTCCTTCATCTCTTTGGGAGTTTCAGG
JMFF033O14+ TGAGCTTTCTTCATAAACAGAGTCCTTCATCTCTTTGGGAGTTTCAGG
JMSF021O17+ AATTGTTTTTCCTGAGCTTTCTTCATAAACAGAGTCCTTCATCTCTTTGGGAGTTTCAGG
                      ____________________________________________________________
consensus AATTGTTTTTCCTGAGCTTTCTTCATAAACAGAGTCCTTCATCTCTTTGGGAGTTTCAGG
 
. : . : . : . : . : . :
JMSF035G19+ AGTGTCCTCCACAATCTCCCCATCTTCAATCTTAACTACTGTAGACAATAATCTCTTTTT
JMFF047E02+ AGTGTCCTCCACAATCTCCCCATCTTCAATCTTAACTACTGTAGACAATAATCTCTTTTT
JMSF050P19+ AGTGTCCTCCACAATCTCCCCATCTTCAATCTTAACTACTGTAGACAATAATCTCTTTTT
JMSF036F11+ AGTGTCCTCCACAATCTCCCCATCTTCAATCTTAACTACTGTAGACAATAATCTCTTTTT
JMFF033O14+ AGTGTCCTCCACAATCTCCCCATCTTCAATCTTAACTACTGTAGACAATAATCTCTTTTT
JMSF021O17+ AGTGTCCTCCACAATCTCCCCATCTTCAATCTTAACTACTGTAGACAATAATCTCTTTTT
                      ____________________________________________________________
consensus AGTGTCCTCCACAATCTCCCCATCTTCAATCTTAACTACTGTAGACAATAATCTCTTTTT
 
. : . : . : . : . : . :
JMSF035G19+ TGGCATCGGCTGATCCTCAGCATCATTCCTCTCGGCCGGTCTGACAAGGCCACGCTGGCG
JMFF047E02+ TGGCATCGGCTGATCCTCAGCATCATTCCTCTCGGCCGGTCTGACAAGGCCACGCTGGCG
JMSF050P19+ TGGCATCGGCTGATCCTCAGCATCATTCCTCTCGGCCGGTCTGACAAGGCCACGCTGGCG
JMSF036F11+ TGGCATCGGCTGATCCTCAGCATCATTCCTCTCGGCCGGTCTGACAAGGCCACGCTGGCG
JMFF033O14+ TGGCATCGGCTGATCCTCAGCATCATTCCTCTCGGCCGGTCTGACAAGGCCACGCTGGCG
JMSF021O17+ TGGCATCGGCTGATCCTCAGCATCATTCCTCTCGGCCGGCCTGACAAGGCCACGCTGGCG
                      ____________________________________________________________
consensus TGGCATCGGCTGATCCTCAGCATCATTCCTCTCGGCCGGTCTGACAAGGCCACGCTGGCG
 
. : . : . : . : . : . :
JMSF035G19+ GCCGCCGTTGGCGACGAAATTCCGAGGACCGGAGCCAGTAAATCCACCGCGGCGAATGCC
JMFF047E02+ GCCGCCGTTGGCGACGAAATTCCGAGGACCGGAGCCAGTAAATCCACCGCGGCGAATGCC
JMSF050P19+ GCCGCCGTTGGCGACGAAATTCCGAGGACCGGAGCCAGTAAATCCACCGCGGCGAATGCC
JMSF036F11+ GCCGCCGTTGGCGACGAAATTCCGAGGACCGGAGCCAGTAAATCCACCGCGGCGAATGCC
JMFF033O14+ GCCGCCGTTGGCGANGAAATTCCGAGGACCGGAGCCAGTAAATCCACCGCGGCGAATGCC
JMSF021O17+ GCCGCCGTTGGCGACGAAATTCCGAGGACCGGAGCCAGTAAATCCACCGCGGCGAATGCC
                      ____________________________________________________________
consensus GCCGCCGTTGGCGACGAAATTCCGAGGACCGGAGCCAGTAAATCCACCGCGGCGAATGCC
 
. : . : . : . : . : . :
JMSF035G19+ TCTTGGATCGCGAAGCCGTTCAGTTATCTCGCGTCGTTGACGATTGAGTTCATCAATTTC
JMFF047E02+ TCTTGGATCGCGAAGCCGTTCAGTTATCTCGCGTCGTTGACGATTGAGTTCATCAATTTC
JMSF050P19+ TCTTGGATCGCGAAGCCGTTCAGTTATCTCGCGTCGTTGACGATTGAGTTCATCAATTTC
JMSF036F11+ TCTTGGATCGCGAAGCCGTTCAGTTATCTCGCGTCGTTGACGATTGAGTTCATCAATTTC
JMFF033O14+ TCTTGGATCGCGAAGCCGTTCAGTTATCTCGCGTCGTNGACGATTGAGTTCATCAATTTC
JMSF021O17+ TCTTGGATCGCGAAGCCGTTCAGTTATCTCGCGTCGTTGACGATTGAGTTCATCAATTTC
                      ____________________________________________________________
consensus TCTTGGATCGCGAAGCCGTTCAGTTATCTCGCGTCGTTGACGATTGAGTTCATCAATTTC
 
. : . : . : . : . : . :
JMSF035G19+ CTTTCGCAGCTCCTCCTCCGTCTTCTCCGCGACGGCGCTTGCCATTGTTTTGGCTCTGAG
JMFF047E02+ CTTTCGCAGCTCCTCCTCCGTCTTCTCCGCGACGGCGCTTGCCATTGTTTTGGCTCTGAG
JMSF050P19+ CTTTCGCAGCTCCTCCTCCGTCTTCTCCGCGACGGCGCTTGCCATTGTTTTGGCTCTGAG
JMSF036F11+ CTTTCGCAGCTCCTCCTCCGTCTTCTCCGCGACGGCGCTTGCCATTGTTTTGGCTCTGAG
JMFF033O14+ CTTTCGCAGCTCCTCCTCCGTCTTCTCCGCGACGGCGCTTGCCATTGTTTTGGCTATGAG
JMSF021O17+ CTTTCGCAGCTCCTCCTCCGTCTTCTCCGCGACGGCGCTTGCCATTGTTTTGGCTCTGAG
                      ____________________________________________________________
consensus CTTTCGCAGCTCCTCCTCCGTCTTCTCCGCGACGGCGCTTGCCATTGTTTTGGCTCTGAG
 
. : . : . : . : . : . :
JMSF035G19+ CAACACTCCGTTCTCTCTGCGACTCTCGTTTTTGCACCG
JMFF047E02+ CAACACTCCGTTCTCTCTGCGACTCTCGTTTTTCCACC
JMSF050P19+ CAACACTCCGTTCTCTCTGCGACTCTCGTTTTTGCACCG
JMSF036F11+ CAACACTCCGTTCTCTCTGCGACTCTCGTTTTTGCACCG
JMFF033O14+ CAACACTCCGTTCTCTCTGCGACTCTCGTTTNTGCNCCGTNTACCAAAAAACCCTCGAC
JMSF021O17+ CAACACTCCGTTCTCTCTGCGACTCTCGTTTTTGCACCGTCTACCAAAAAACCCTCGACT
                      ____________________________________________________________
consensus CAACACTCCGTTCTCTCTGCGACTCTCGTTTTTGCACCGTCTACCAAAAAACCCTCGACT