Contig 009311:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004A22Sequence351009311 (3)ref|XP_009604383.1|3e-64PREDICTED: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase isofo149001239 (29)
JMSF018M16Sequence506009311 (3)ref|XP_009604383.1|1e-66PREDICTED: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase isofo698002830 (3)ref|XP_006359395.1|5e-28PREDICTED: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase-like
JMSF021H10Sequence674009311 (3)ref|XP_009604383.1|1e-60PREDICTED: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase isofo722002830 (3)ref|XP_006359395.1|3e-48PREDICTED: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase-like

Alignment

This contig is upended


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JMSF021H10+                                                         AAGCAAGAGCAGTG
                      ____________________________________________________________
consensus                                                           AAGCAAGAGCAGTG
 
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JMSF021H10+           CACCGTGTAGGATAGTTGTGGCTAAACAATCATTGAACAAGCGAAGCACAAAGATGGAGT
                      ____________________________________________________________
consensus             CACCGTGTAGGATAGTTGTGGCTAAACAATCATTGAACAAGCGAAGCACAAAGATGGAGT
 
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JMSF004A22+                                                         CACATCAGTCTTCA
JMSF018M16+                                                         CACATCAGTCTTCA
JMSF021H10+           GAACCCTTTTGGACAGAGAAAGCAGTGACAAAGCCCACCAGGGAACCACATCAGTCTTCA
                      ____________________________________________________________
consensus             GAACCCTTTTGGACAGAGAAAGCAGTGACAAAGCCCACCAGGGAACCACATCAGTCTTCA
 
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JMSF004A22+           GATAGATGACCAAGGTAATTCCATGATTTAGAATATAGAGAAGGCCAAACAGAATCTGAG
JMSF018M16+           GATAGATGACCAAGGTAATTCCATGATTTAGAATATAGAGAAGGCCAAACAGAATCTGAG
JMSF021H10+           GATAGATGACCAAGGTAATTCCATGATTTAGAATATAGAGAAGGCCAAACAGAATCTGAG
                      ____________________________________________________________
consensus             GATAGATGACCAAGGTAATTCCATGATTTAGAATATAGAGAAGGCCAAACAGAATCTGAG
 
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JMSF004A22+           CAAGAAAGACCTGGCCTCCTGTAACATATTGTATGGCAGAATAAAGGTAGAGAAAGCCAG
JMSF018M16+           CAAGAAAGACCTGGCCTCCTGTAACATATTGTATGGCAGAATAAAGGTAGAGAAAGCCAG
JMSF021H10+           CAAGAAAGACCTGGCCTCCTGTAACATATTGTATGGCAGAATAAAGGTAGAGAAAGCCAG
                      ____________________________________________________________
consensus             CAAGAAAGACCTGGCCTCCTGTAACATATTGTATGGCAGAATAAAGGTAGAGAAAGCCAG
 
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JMSF004A22+           CTGGGTATACTAGAGGCCCAGTGTCACCTTTCAGGTTCTCGTAATCCCTCTCTCCTCCGA
JMSF018M16+           CTGGGTATACTAGAGGCCCAGTGTCACCTTTCAGGTTCTCGTAATCCCTCTCTCCTCCGA
JMSF021H10+           CTGGGTATACTAGAGGCCCAGTGTCACCTTTCAGGTTCTCGTAATCCCTCTCTCCTCCGA
                      ____________________________________________________________
consensus             CTGGGTATACTAGAGGCCCAGTGTCACCTTTCAGGTTCTCGTAATCCCTCTCTCCTCCGA
 
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JMSF004A22+           GAAAACCACTCACCT                                             
JMSF018M16+           GAAAACCACTCACCT                                             
JMSF021H10+           GAAAACCACTCACCTATTCATCAACGAGTAAATCAGCAAAGTACTGAAATCAGAAACCAA
                      ____________________________________________________________
consensus             GAAAACCACTCACCTATTCATCAACGAGTAAATCAGCAAAGTACTGAAATCAGAAACCAA
 
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JMSF021H10+           AACTTGAAGCAAAATTAGACTCAAACCTGAGACATATAAGCATCCCAATCTATCTTTGTA
                      ____________________________________________________________
consensus             AACTTGAAGCAAAATTAGACTCAAACCTGAGACATATAAGCATCCCAATCTATCTTTGTA
 
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JMSF021H10+           TCTGAAACCAATGAATTGCCACATAATAATTAAGAGAAAATTCACAAAACAGAAGAAGAT
                      ____________________________________________________________
consensus             TCTGAAACCAATGAATTGCCACATAATAATTAAGAGAAAATTCACAAAACAGAAGAAGAT
 
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JMSF021H10+           AGAAATAGGGGTGGAGTGTGGATTGCTGATATTTACATGGAACATAGGCGATGATAAGCG
                      ____________________________________________________________
consensus             AGAAATAGGGGTGGAGTGTGGATTGCTGATATTTACATGGAACATAGGCGATGATAAGCG
 
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JMSF021H10+           CAACAAGTATGGACTCGGCAACGATCAAAGCAAAACCGAAGTGTAATTTAGGATTCTGAA
                      ____________________________________________________________
consensus             CAACAAGTATGGACTCGGCAACGATCAAAGCAAAACCGAAGTGTAATTTAGGATTCTGAA
 
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JMSF021H10+           ATCTTCGCACAGCGTTGCGCTTAGCGGCAGATCGAGCCGCCATGGTTGCTTACGCCGTTC
                      ____________________________________________________________
consensus             ATCTTCGCACAGCGTTGCGCTTAGCGGCAGATCGAGCCGCCATGGTTGCTTACGCCGTTC