Contig 009309:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF037F05+                                                               TTTTTTTT
                      ____________________________________________________________
consensus                                                                 TTTTTTTT
 
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JMFF037F05+           NNGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
                      ____________________________________________________________
consensus             NNGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
 
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JMFF037F05+           TTTTTTTTTTTTTTTTTTTCAACAATATAAATTTGTCAAATCATTTATACAGGCTTTAAT
rJMFF037F05-                                                             GGCTTTAAT
                      ____________________________________________________________
consensus             TTTTTTTTTTTTTTTTTTTCAACAATATAAATTTGTCAAATCATTTATACAGGCTTTAAT
 
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JMFF037F05+           TTTGATCTCTACATTTTACAAGGAATATATATTTTTATGCTTCATCATAATGGGTATTTC
rJMFF037F05-          TTTGATCTCTACATTTTACAAGGAATATATATTTTTATGCTTCATCATAATGGGTATTTC
                      ____________________________________________________________
consensus             TTTGATCTCTACATTTTACAAGGAATATATATTTTTATGCTTCATCATAATGGGTATTTC
 
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JMFF037F05+           TATGAAAACTGAGCCGATTGAGAAATTGCATCCTGCAGATATTTCAAGGTTCTTTGATGT
rJMFF037F05-          TATGAAAACTGAGCCGATTGAGAAATTGCATCCTGCAGATATTTCAAGGTTCTTTGATGT
rJMSF021F01-                            TGAGAAATTGCATTTTGGAGATATTTTAAGGTTCTTTGATGA
JMSF021F01+                                                              CTTTGATGA
                      ____________________________________________________________
consensus             TATGAAAACTGAGCCGATTGAGAAATTGCATCCTGCAGATATTTCAAGGTTCTTTGATGT
 
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JMFF037F05+           TGTTGGAACCACATAAACCAAAACTCAAAATGGTCTTCTGTCACTACTTGCACATACTTC
rJMFF037F05-          TGTTGGAACCACATAAACCAAAACTCAAAATGGTCTTCTGTCACTACTTGCACATACTTC
rJMSF021F01-          TGTGGGAACCACATAAACCAGAACTCAAAATGATCTTCTGTGACTACTTGTATGTACTTC
JMSF021F01+           TGTGGGAACCACATAAACCAGAACTCAAAATGATCTTCTGTGACTACTTGTATGTACTTC
                      ____________________________________________________________
consensus             TGTTGGAACCACATAAACCAGAACTCAAAATGGTCTTCTGTGACTACTTGTATGTACTTC
 
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JMFF037F05+           TCTGA                                                       
rJMFF037F05-          TCTGATGGA                                                   
rJMSF021F01-          TCTGATGGATTCTTCAAATTCTCACTTTCATTTGCTCTCTTAATTTTTGTAATTGGGATT
JMSF021F01+           TCTGATGGATTCTTCAAATTCTCACTTTCATTTGCTCTCTTAATTTTTGTAATTGGGATT
                      ____________________________________________________________
consensus             TCTGATGGATTCTTCAAATTCTCACTTTCATTTGCTCTCTTAATTTTTGTAATTGGGATT
 
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rJMSF021F01-          GACACCTTATAATGCATTCTCTTGGACTTTCCGGTTGAAGAAGGGATTTTGATTGATCTC
JMSF021F01+           GACACCTTATAATGCATTCTCTTGGACTTTCCGGTTGAAGAAGGGATTTTGATTGATCTC
                      ____________________________________________________________
consensus             GACACCTTATAATGCATTCTCTTGGACTTTCCGGTTGAAGAAGGGATTTTGATTGATCTC
 
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rJMSF021F01-          TCACTAAGGAAGGCAAGTTTATGAGTAGAAACAAAGAGTAGACCAGGCATTGGACCAGAT
JMSF021F01+           TCACTAAGGAAGGCAAGTTTATGAGTAGAAACAAAGAGTAGACCAGGCATTGGACCAGAT
                      ____________________________________________________________
consensus             TCACTAAGGAAGGCAAGTTTATGAGTAGAAACAAAGAGTAGACCAGGCATTGGACCAGAT
 
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rJMSF021F01-          GTTGTTGATAAATAACATTGAGATGCCTTCAACAGCTTTTCCCCTTCTTTAGCACTGAAT
JMSF021F01+           GTTGTTGATAAATAACATTGAGATGCCTTCAACAGCTTTTCCCCTTCTTTAGCACTGAAT
                      ____________________________________________________________
consensus             GTTGTTGATAAATAACATTGAGATGCCTTCAACAGCTTTTCCCCTTCTTTAGCACTGAAT
 
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rJMSF021F01-          TCCTTGTTGAACACCTTTTGGACGCCACCTGCTTGGAGAAGTTTTGCCCCAAGAATCAGC
JMSF021F01+           TCCTTGTTGAACACCTTTTGGACGCCACCTGCTTGGAGAAGTTTTGCCCCAAGAATCAGC
                      ____________________________________________________________
consensus             TCCTTGTTGAACACCTTTTGGACGCCACCTGCTTGGAGAAGTTTTGCCCCAAGAATCAGC
 
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rJMSF021F01-          TTGCTCTTCACAGTGTCTGTTATCTTGGGCATTAATTTCACTGCACCATTTCTTTGTTTT
JMSF021F01+           TTGCTCTTCACAGTGTCTGTTATCTTGGGCATTAATTTCACTGCACCATTTCTTTGTTTT
                      ____________________________________________________________
consensus             TTGCTCTTCACAGTGTCTGTTATCTTGGGCATTAATTTCACTGCACCATTTCTTTGTTTT
 
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rJMSF021F01-          GAACTGGAAGACAGATGGTATTGGGTGGCGGCAGAATGAGGAAGTGCCTGTTTTGTTGAG
JMSF021F01+           GAACTGGAAGACAGATGGTATTGGGTGGCGGCAGAATGAGGAAGTGCCTGTTTTGTTGAG
                      ____________________________________________________________
consensus             GAACTGGAAGACAGATGGTATTGGGTGGCGGCAGAATGAGGAAGTGCCTGTTTTGTTGAG
 
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rJMSF021F01-          CTCTGATTCAATAAAACTGGCCAGTAGTTGATGGGAACCTGCAGGTTCTCTCCAGTTCTT
JMSF021F01+           CTCTGATTCAATAAAACTGGCCAGTAGTTGATGGGAACCTGCAGGTTCTCTCCAGTTCTT
                      ____________________________________________________________
consensus             CTCTGATTCAATAAAACTGGCCAGTAGTTGATGGGAACCTGCAGGTTCTCTCCAGTTCTT
 
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rJMSF021F01-          GATTTCATCTAGTTTTGCTTCATCTCTAACTTACTTTTGTTGTTTTGTATTTGGAAGGAT
JMSF021F01+           GATTTCATCTAGTTTTGCTTCATCTCTAACTTACTTTTGTTGTTTTGTATTTGGAAGGAT
                      ____________________________________________________________
consensus             GATTTCATCTAGTTTTGCTTCATCTCTAACTTACTTTTGTTGTTTTGTATTTGGAAGGAT
 
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rJMSF021F01-          AACAAGAAATTATCTTTGCTAATAAAGCCTAAAGGATGAGTAGACTCGANTGAACTGATC
JMSF021F01+           AACAAGAAATTATCTTTGCTAATAAAGCCTAAAGGATGAGTAGACTCGAATGAACTGATC
                      ____________________________________________________________
consensus             AACAAGAAATTATCTTTGCTAATAAAGCCTAAAGGATGAGTAGACTCGAATGAACTGATC