Contig 009309:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037F05Sequence313009309 (4)ref|XP_009779255.1|3e-10PREDICTED: putative GEM-like protein 8 [Nicotiana sylvestris]208009309 (4)ref|XP_009779255.1|3e-12PREDICTED: putative GEM-like protein 8 [Nicotiana sylvestris]
JMSF021F01Sequence669009309 (4)emb|CDP17461.1|5e-61unnamed protein product [Coffea canephora]742009309 (4)emb|CDP17461.1|7e-66unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF037F05+ TTTTTTTT
                      ____________________________________________________________
consensus TTTTTTTT
 
. : . : . : . : . : . :
JMFF037F05+ NNGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
                      ____________________________________________________________
consensus NNGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
 
. : . : . : . : . : . :
JMFF037F05+ TTTTTTTTTTTTTTTTTTTCAACAATATAAATTTGTCAAATCATTTATACAGGCTTTAAT
rJMFF037F05- GGCTTTAAT
                      ____________________________________________________________
consensus TTTTTTTTTTTTTTTTTTTCAACAATATAAATTTGTCAAATCATTTATACAGGCTTTAAT
 
. : . : . : . : . : . :
JMFF037F05+ TTTGATCTCTACATTTTACAAGGAATATATATTTTTATGCTTCATCATAATGGGTATTTC
rJMFF037F05- TTTGATCTCTACATTTTACAAGGAATATATATTTTTATGCTTCATCATAATGGGTATTTC
                      ____________________________________________________________
consensus TTTGATCTCTACATTTTACAAGGAATATATATTTTTATGCTTCATCATAATGGGTATTTC
 
. : . : . : . : . : . :
JMFF037F05+ TATGAAAACTGAGCCGATTGAGAAATTGCATCCTGCAGATATTTCAAGGTTCTTTGATGT
rJMFF037F05- TATGAAAACTGAGCCGATTGAGAAATTGCATCCTGCAGATATTTCAAGGTTCTTTGATGT
rJMSF021F01- TGAGAAATTGCATTTTGGAGATATTTTAAGGTTCTTTGATGA
JMSF021F01+ CTTTGATGA
                      ____________________________________________________________
consensus TATGAAAACTGAGCCGATTGAGAAATTGCATCCTGCAGATATTTCAAGGTTCTTTGATGT
 
. : . : . : . : . : . :
JMFF037F05+ TGTTGGAACCACATAAACCAAAACTCAAAATGGTCTTCTGTCACTACTTGCACATACTTC
rJMFF037F05- TGTTGGAACCACATAAACCAAAACTCAAAATGGTCTTCTGTCACTACTTGCACATACTTC
rJMSF021F01- TGTGGGAACCACATAAACCAGAACTCAAAATGATCTTCTGTGACTACTTGTATGTACTTC
JMSF021F01+ TGTGGGAACCACATAAACCAGAACTCAAAATGATCTTCTGTGACTACTTGTATGTACTTC
                      ____________________________________________________________
consensus TGTTGGAACCACATAAACCAGAACTCAAAATGGTCTTCTGTGACTACTTGTATGTACTTC
 
. : . : . : . : . : . :
JMFF037F05+ TCTGA
rJMFF037F05- TCTGATGGA
rJMSF021F01- TCTGATGGATTCTTCAAATTCTCACTTTCATTTGCTCTCTTAATTTTTGTAATTGGGATT
JMSF021F01+ TCTGATGGATTCTTCAAATTCTCACTTTCATTTGCTCTCTTAATTTTTGTAATTGGGATT
                      ____________________________________________________________
consensus TCTGATGGATTCTTCAAATTCTCACTTTCATTTGCTCTCTTAATTTTTGTAATTGGGATT
 
. : . : . : . : . : . :
rJMSF021F01- GACACCTTATAATGCATTCTCTTGGACTTTCCGGTTGAAGAAGGGATTTTGATTGATCTC
JMSF021F01+ GACACCTTATAATGCATTCTCTTGGACTTTCCGGTTGAAGAAGGGATTTTGATTGATCTC
                      ____________________________________________________________
consensus GACACCTTATAATGCATTCTCTTGGACTTTCCGGTTGAAGAAGGGATTTTGATTGATCTC
 
. : . : . : . : . : . :
rJMSF021F01- TCACTAAGGAAGGCAAGTTTATGAGTAGAAACAAAGAGTAGACCAGGCATTGGACCAGAT
JMSF021F01+ TCACTAAGGAAGGCAAGTTTATGAGTAGAAACAAAGAGTAGACCAGGCATTGGACCAGAT
                      ____________________________________________________________
consensus TCACTAAGGAAGGCAAGTTTATGAGTAGAAACAAAGAGTAGACCAGGCATTGGACCAGAT
 
. : . : . : . : . : . :
rJMSF021F01- GTTGTTGATAAATAACATTGAGATGCCTTCAACAGCTTTTCCCCTTCTTTAGCACTGAAT
JMSF021F01+ GTTGTTGATAAATAACATTGAGATGCCTTCAACAGCTTTTCCCCTTCTTTAGCACTGAAT
                      ____________________________________________________________
consensus GTTGTTGATAAATAACATTGAGATGCCTTCAACAGCTTTTCCCCTTCTTTAGCACTGAAT
 
. : . : . : . : . : . :
rJMSF021F01- TCCTTGTTGAACACCTTTTGGACGCCACCTGCTTGGAGAAGTTTTGCCCCAAGAATCAGC
JMSF021F01+ TCCTTGTTGAACACCTTTTGGACGCCACCTGCTTGGAGAAGTTTTGCCCCAAGAATCAGC
                      ____________________________________________________________
consensus TCCTTGTTGAACACCTTTTGGACGCCACCTGCTTGGAGAAGTTTTGCCCCAAGAATCAGC
 
. : . : . : . : . : . :
rJMSF021F01- TTGCTCTTCACAGTGTCTGTTATCTTGGGCATTAATTTCACTGCACCATTTCTTTGTTTT
JMSF021F01+ TTGCTCTTCACAGTGTCTGTTATCTTGGGCATTAATTTCACTGCACCATTTCTTTGTTTT
                      ____________________________________________________________
consensus TTGCTCTTCACAGTGTCTGTTATCTTGGGCATTAATTTCACTGCACCATTTCTTTGTTTT
 
. : . : . : . : . : . :
rJMSF021F01- GAACTGGAAGACAGATGGTATTGGGTGGCGGCAGAATGAGGAAGTGCCTGTTTTGTTGAG
JMSF021F01+ GAACTGGAAGACAGATGGTATTGGGTGGCGGCAGAATGAGGAAGTGCCTGTTTTGTTGAG
                      ____________________________________________________________
consensus GAACTGGAAGACAGATGGTATTGGGTGGCGGCAGAATGAGGAAGTGCCTGTTTTGTTGAG
 
. : . : . : . : . : . :
rJMSF021F01- CTCTGATTCAATAAAACTGGCCAGTAGTTGATGGGAACCTGCAGGTTCTCTCCAGTTCTT
JMSF021F01+ CTCTGATTCAATAAAACTGGCCAGTAGTTGATGGGAACCTGCAGGTTCTCTCCAGTTCTT
                      ____________________________________________________________
consensus CTCTGATTCAATAAAACTGGCCAGTAGTTGATGGGAACCTGCAGGTTCTCTCCAGTTCTT
 
. : . : . : . : . : . :
rJMSF021F01- GATTTCATCTAGTTTTGCTTCATCTCTAACTTACTTTTGTTGTTTTGTATTTGGAAGGAT
JMSF021F01+ GATTTCATCTAGTTTTGCTTCATCTCTAACTTACTTTTGTTGTTTTGTATTTGGAAGGAT
                      ____________________________________________________________
consensus GATTTCATCTAGTTTTGCTTCATCTCTAACTTACTTTTGTTGTTTTGTATTTGGAAGGAT
 
. : . : . : . : . : . :
rJMSF021F01- AACAAGAAATTATCTTTGCTAATAAAGCCTAAAGGATGAGTAGACTCGANTGAACTGATC
JMSF021F01+ AACAAGAAATTATCTTTGCTAATAAAGCCTAAAGGATGAGTAGACTCGAATGAACTGATC
                      ____________________________________________________________
consensus AACAAGAAATTATCTTTGCTAATAAAGCCTAAAGGATGAGTAGACTCGAATGAACTGATC