Contig 009301:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF049D10+                                                                   AGTA
                      ____________________________________________________________
consensus                                                                     AGTA
 
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JMFF049D10+           AAGTTGGATAAAAGAGAGCTCGAGCCCCGGCTCCAACCAACACCCTTTTCACATCTGAAC
JMSF020O17+                                                                  TGAAC
                      ____________________________________________________________
consensus             AAGTTGGATAAAAGAGAGCTCGAGCCCCGGCTCCAACCAACACCCTTTTCACATCTGAAC
 
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JMFF049D10+           ATGGCTCCTCCTCCTCACTCCCTGTTTCCCCCTCCTTCAGTTCCTCAATATACATAATTT
JMSF020O17+           ATGGNTCCTCCTCCTCACTCCCTGTTTNCCCCTCCTTCAGTTCCTCAATATACATAATTT
                      ____________________________________________________________
consensus             ATGGCTCCTCCTCCTCACTCCCTGTTTCCCCCTCCTTCAGTTCCTCAATATACATAATTT
 
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JMFF049D10+           CTACCCCTAACAAAGTTCAGAAACAGTCACAATTCACCTACAAGCTCAAATTGAATCGAT
JMSF020O17+           CTACCCCTAACAAAGTTCAGAAACNGTCACAATTCNCCTACAAGNTCAAATTGAATCGNT
                      ____________________________________________________________
consensus             CTACCCCTAACAAAGTTCAGAAACAGTCACAATTCACCTACAAGCTCAAATTGAATCGAT
 
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JMFF049D10+           TAATGAACTGCAATTCCAATAAACTAATGAATTAAAATCCCAAAACTGCAAAATTAAATC
JMSF020O17+           TAATGAACTGCAATTCCNATAAACTAATGAATTAAAATCCCNAAACTGCAAAATTAAATC
                      ____________________________________________________________
consensus             TAATGAACTGCAATTCCAATAAACTAATGAATTAAAATCCCAAAACTGCAAAATTAAATC
 
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JMFF049D10+           CACAAACAAGCATTCAAATCAAACCCTAACCCTAACCCTAACCCTAACCCAAATGAACTT
JMSF020O17+           CNCAAACNAGCNTTCAAATCAAACCCTAACCCTAACCCTAACCCTAACCCAAATGAACTT
                      ____________________________________________________________
consensus             CACAAACAAGCATTCAAATCAAACCCTAACCCTAACCCTAACCCTAACCCAAATGAACTT
 
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JMFF049D10+           TGCAAATAACAATCTTCACAATCCAGCTACTTCTTCAAACGAATTCGACCCAGAACAACA
JMSF020O17+           TGCAAATAACAATTTTCNCAATCCAGNTACTTTTTCAAACGAATTNGNCCCNGAACAACN
                      ____________________________________________________________
consensus             TGCAAATAACAATTTTCACAATCCAGCTACTTTTTCAAACGAATTCGACCCAGAACAACA
 
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JMFF049D10+           CCTTCTCCGATTCCTACAGCAAAACAAAAAAAACCCAAACTTTTATTTCACTTCAAGAAC
JMSF020O17+           CCTTTTNCGNTTCCTNCAGCAAAACAAAAAAAACCCNAACTTTTATTTCNCTTCAAGAAC
                      ____________________________________________________________
consensus             CCTTTTCCGATTCCTACAGCAAAACAAAAAAAACCCAAACTTTTATTTCACTTCAAGAAC
 
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JMFF049D10+           AAGAATGCAGGTTTTCTTGATCACGTTTCGCAATCTAAACCCCCACATGGGAGAGGGGAA
JMSF020O17+           AAGAATGCNGGTTTTNTTGATCNCGTTTCGCAATNTAAACCCCCNCNTGGGNGAGGGGAA
                      ____________________________________________________________
consensus             AAGAATGCAGGTTTTCTTGATCACGTTTCGCAATCTAAACCCCCACATGGGAGAGGGGAA
 
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JMFF049D10+           CTGGGGAAGTTGATGAAAGGAAGCAAATTTAGAAAGCCCGGAATTCAATGAATTGTGATG
JMSF020O17+           CTGGGGAAGTTGATGAAAGGAAGCAAATTTAGAAAGCCCGGAATTCAATGAATTGTGATG
                      ____________________________________________________________
consensus             CTGGGGAAGTTGATGAAAGGAAGCAAATTTAGAAAGCCCGGAATTCAATGAATTGTGATG
 
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JMFF049D10+           AGAGAGGGAAGCGGTACGGGACAAGAAAATCAACGACGAAAAAAAAAAGAGGTTTTTGTC
JMSF020O17+           AGAGAGGGAAGCGGTNCGGGACNAGAAAATCAACGNCGNAAAAAAAAAGAGGTTTTTGTC
                      ____________________________________________________________
consensus             AGAGAGGGAAGCGGTACGGGACAAGAAAATCAACGACGAAAAAAAAAAGAGGTTTTTGTC
 
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JMFF049D10+           TATGTAATACAGCGGTTT                                          
JMSF020O17+           TATGTAATACAGCGGTTTAGAAAGGAACGAGGCTATTCTGGGGTTGTCGGGCAATTCTTT
                      ____________________________________________________________
consensus             TATGTAATACAGCGGTTTAGAAAGGAACGAGGCTATTCTGGGGTTGTCGGGCAATTCTTT