Contig 009299:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052A07-                 ATGTCGTATATATGATCTCTTATGTAAGAATCATAAACTCATATCACTAGACT
                      ____________________________________________________________
consensus                    ATGTCGTATATATGATCTCTTATGTAAGAATCATAAACTCATATCACTAGACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052A07-          ACAAGACCCACATGATAAATGGTTTAATTCACTAGCCTACACAGCTAGTGTCAAAGAGTT
                      ____________________________________________________________
consensus             ACAAGACCCACATGATAAATGGTTTAATTCACTAGCCTACACAGCTAGTGTCAAAGAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052A07-          TTGAGTCCCAAAACCCAAAAACATTATTGGGAGGCAGATGAAGTAGAAATTTCATTCATG
JMSF052A07+                                        GGAGGCAGATGAAGTAGAAATTTCATTCATG
                      ____________________________________________________________
consensus             TTGAGTCCCAAAACCCAAAAACATTATTGGGAGGCAGATGAAGTAGAAATTTCATTCATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052A07-          TTTTGCAGTATGTATGATGATGCATAGGCCATCAAGTTACCATATGATTATATGAAAAAA
JMSF052A07+           TTTTGCAGTATGTATGATGATGCATAGGCCATCAAGTTACCATATGATTATATGAAAAAA
rJMSF020M08-                      TATGATGATGCATAGGCCATCAAGTTACCATATGATTATATGAAAAAA
JMSF020M08+               GCAGTATGTATGATGATGCATAGGCCATCAAGTTACCATATGATTATATGAAAAAA
                      ____________________________________________________________
consensus             TTTTGCAGTATGTATGATGATGCATAGGCCATCAAGTTACCATATGATTATATGAAAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052A07-          GAACATACATCACAGCCATATCAATATATCATCATAAGATCCAACTTGTGCTTCACTGCA
JMSF052A07+           GAACATACATCACAGCCATATCAATATATCATCATAAGATCCAACTTGTGCTTCACTGCA
rJMSF020M08-          GAACATACATCACAGCCATATCAATATATCATCATAAGATCCAACTTGTGCTTCACTGCA
JMSF020M08+           GAACATACATCACAGCCATATCAATATATCATCATAAGATCCAACTTGTGCTTCACTGCA
                      ____________________________________________________________
consensus             GAACATACATCACAGCCATATCAATATATCATCATAAGATCCAACTTGTGCTTCACTGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052A07-          TCAAAAGCTTTGAACATGACAACAAATATAGTAGTAGCATCCCTTAAAGATCTGGCATGC
JMSF052A07+           TCAAAAGCTTTGAACATGACAACAAATATAGTAGTAGCATCCCTTAAAGATCTGGCATGC
rJMSF020M08-          TCAAAAGCTTTGAACATGACAACAAATATAGTAGTAGCATTCCTTAAAGATCTGGCATGC
JMSF020M08+           TCAAAAGCTTTGAACATGACAACAAATATAGTAGTAGCATTCCTTAAAGATCTGGCATGC
                      ____________________________________________________________
consensus             TCAAAAGCTTTGAACATGACAACAAATATAGTAGTAGCATTCCTTAAAGATCTGGCATGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052A07-          CTTTTCCAGTTTTCGGGTCATATGTCTTCTCCAAGACATCTTCCAATGGAGTGTCCTTCG
JMSF052A07+           CTTTTCCAGTTTTCGGGTCATATGTCTTCTCCAAGACATCTTCCAATGGAGTGTCCTTCG
rJMSF020M08-          CTTTTCCAGTTTTCGGGTCATATGTCTTCTCCAAGACATCTTCCAATGGAGTGTCCTTCG
JMSF020M08+           CTTTTCCAGTTTTCGGGTCATATGTCTTCTCCAAGACATCTTCCAATGGAGTGTCCTTCG
                      ____________________________________________________________
consensus             CTTTTCCAGTTTTCGGGTCATATGTCTTCTCCAAGACATCTTCCAATGGAGTGTCCTTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052A07-          GCCCAGCAACTGATGGTCTTGGTGTAGTCCTTATCTTCAAGATCTCAGGACGAGGAATAA
JMSF052A07+           GCCCAGCAACTGATGGTCTTGGTGTAGTCCTTATCTTCAAGATCTCAGGACGAGGAATAA
rJMSF020M08-          GCCCAGCAACTGATGGTCTTGGTGTAGTCCTTATCTTCAAGATCTCAGGACGAGGAATAA
JMSF020M08+           GCCCAGCAACTGATGGTCTTGGTGTAGTCCTTATCTTCAAGATCTCAGGACGAGGAATAA
                      ____________________________________________________________
consensus             GCCCAGCAACTGATGGTCTTGGTGTAGTCCTTATCTTCAAGATCTCAGGACGAGGAATAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052A07-          TGGAGCCTGATGTTCCAATACCTCTGGAAACTCTTACTTTGGTGCCATCTTCCAAGTATC
JMSF052A07+           TGGAGCCTGATGTTCCAATACCTCTGGAAACTCTTACTTTGGTGCCATCTTCCAAGTATC
rJMSF020M08-          TGGAGCCTGATGTTCCAATACCTCTGGAAACTCTTACTTTGGTGCCATCTTCCAAGTATC
JMSF020M08+           TGGAGCCTGATGTTCCAATACCTCTGGAAACTCTTACTTTGGTGCCATCTTCCAAGTATC
                      ____________________________________________________________
consensus             TGGAGCCTGATGTTCCAATACCTCTGGAAACTCTTACTTTGGTGCCATCTTCCAAGTATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052A07-          TGATTCCAACTTTGCATGGTTGCCCAGTCACTGGATCTAGAACCTGCACATTAGAGACAT
JMSF052A07+           TGATTCCAACTTTGCATGGTTGCCCAGTCACTGGATCTAGAACCTGCACATTAGAGACAT
rJMSF020M08-          TGATTCCAACTTTGCATGGTTGCCCAGTCACTGGATCTAGAACCTGCACATTAGAGACAT
JMSF020M08+           TGATTCCAACTTTGCATGGTTGCCCAGTCACTGGATCTAGAACCTGCACATTAGAGACAT
                      ____________________________________________________________
consensus             TGATTCCAACTTTGCATGGTTGCCCAGTCACTGGATCTAGAACCTGCACATTAGAGACAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052A07-          GCAATGGGGCTTCAACTGTAAATATCCCACCTTCATGACCTTGCCCTTGTTTAATATGCT
JMSF052A07+           GCAATGGGGCTTCAACTGTAAATATCCCACCTTCATGACCTTGCCCTTGTTTAATATGCT
rJMSF020M08-          GCAATGGGGCTTCAACTGTAAATATCCCACCTTCATGACCTTGCCCTTGTTTAATATGCT
JMSF020M08+           GCAATGGGGCTTCAACTGTAAATATCCCACCTTCATGACCTTGCCCTTGTTTAATATGCT
                      ____________________________________________________________
consensus             GCAATGGGGCTTCAACTGTAAATATCCCACCTTCATGACCTTGCCCTTGTTTAATATGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052A07-          TTTTTACCAGGTTTTTGCCCTCCACAATAACACGATTCTGTGAACGTACAACACGCTTAA
JMSF052A07+           TTTTTACCAGGTTTTTGCCCTCCACAATAACACGATTCTGTGAACGTACAACACGCTTAA
rJMSF020M08-          TTTTTACCAGGTTTTTGCCCTCCACAATAACACGATTCTGTGAACGTACAACACGCTTAA
JMSF020M08+           TTTTTACCAGGTTTTTGCCCTCCACAATAACACGATTCTGTGAACGTACAACACGCTTAA
                      ____________________________________________________________
consensus             TTTTTACCAGGTTTTTGCCCTCCACAATAACACGATTCTGTGAACGTACAACACGCTTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052A07-          CGATTCCCGTCTCACCTTTATCTTTGCCTCTAATTATCATAACATTATCACCTCTGAGAA
JMSF052A07+           CGATTCCCGTCTCACCTTTATCTTTGCCTCTAATTATCATAACATTATCACCTCTGAGAA
rJMSF020M08-          CGATTCCCGTCTCACCTTTATCTTTGCCTCTAATTATCATAACATTATCACCTCTGAGAA
JMSF020M08+           CGATTCCCGTCTCACCTTTATCTTTGCCTCTAATTATCATAACATTATCACCTCTGAGAA
                      ____________________________________________________________
consensus             CGATTCCCGTCTCACCTTTATCTTTGCCTCTAATTATCATAACATTATCACCTCTGAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052A07-          CCTTCCAGTGATGTATGAGTTTCTGAGCAGCCTTCCAACCCATTATCTTTCTACACGAAT
JMSF052A07+           CCTTCCAGTGATGTATGAGTTTCTGAGCAGCCTTCCAACCCATTATCTTTCTACACGAAT
rJMSF020M08-          CCTTCCAGTGATGTATGAGTTTCTGAGCAGCCTTCCAACCCATTATCTTTCTACACGAAT
JMSF020M08+           CCTTCCAGTGATGTATGAGTTTCTGAGCAGCCTTCCAACCCATTATCTTTCTACACGAAT
                      ____________________________________________________________
consensus             CCTTCCAGTGATGTATGAGTTTCTGAGCAGCCTTCCAACCCATTATCTTTCTACACGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052A07-          GGTTAAACGAATCTGCTGATTTCGGCGAGCGAGTTCAAT                     
JMSF052A07+           GGTTAAACGAATCTGCTGATTTCGGCGAGCGAGTTCAAT                     
rJMSF020M08-          GGTTAAACGAATCTGCTGATTTCGGCGAGCGAGTTCAATGGAGGGATTGCAGAGGTCAC 
JMSF020M08+           GGTTAAACGAATCTGCTGATTTCGGCGAGCGAGTTCAATGGAGGGATTGCAGAGGTCACC
                      ____________________________________________________________
consensus             GGTTAAACGAATCTGCTGATTTCGGCGAGCGAGTTCAATGGAGGGATTGCAGAGGTCACC