Contig 009298:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF020L24-                                                                  ACAG
                      ____________________________________________________________
consensus                                                                     ACAG
 
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rJMSF020L24-          TAAACAGCCGAGAATTGGGATACGACAACGTGTTTGGTCTTTTGATTTGACAATTTCATA
                      ____________________________________________________________
consensus             TAAACAGCCGAGAATTGGGATACGACAACGTGTTTGGTCTTTTGATTTGACAATTTCATA
 
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rJMSF020L24-          GGAAAATGAAGCATTCCAAGGAAACAAGAGGGTTCTCTAGCGATTCGCCGGTCTCCTCCG
                      ____________________________________________________________
consensus             GGAAAATGAAGCATTCCAAGGAAACAAGAGGGTTCTCTAGCGATTCGCCGGTCTCCTCCG
 
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rJMSF020L24-          AAACGCCGTCATTAGGCTTCTCTACTTTATCTCCGCGATTCTCTGCACTTTCCGCCGCCG
                      ____________________________________________________________
consensus             AAACGCCGTCATTAGGCTTCTCTACTTTATCTCCGCGATTCTCTGCACTTTCCGCCGCCG
 
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rJMSF020L24-          ACAGGGCACTCTCACTCACGGCGGGGCTTTTGTTTCTTACATTACGGCGTGTATCCACCT
                      ____________________________________________________________
consensus             ACAGGGCACTCTCACTCACGGCGGGGCTTTTGTTTCTTACATTACGGCGTGTATCCACCT
 
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rJMSF020L24-          CCCGGTGTGTCACCGGAGAACTTGACCGCCGTGTGGGTACGGACTGTCGTTGGGCCCCGT
                      ____________________________________________________________
consensus             CCCGGTGTGTCACCGGAGAACTTGACCGCCGTGTGGGTACGGACTGTCGTTGGGCCCCGT
 
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rJMSF020L24-          TTTGAGGACCCACATTGCTGCGCCTCTGTGACGCCATTGGCCTAGTCTGGCCTGCTCTAG
                      ____________________________________________________________
consensus             TTTGAGGACCCACATTGCTGCGCCTCTGTGACGCCATTGGCCTAGTCTGGCCTGCTCTAG
 
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rJMSF020L24-          ACGATGTCAGCGGTTTCCGTTTCTCCGGAGATGGCGCCGATCTTCTCGCCGGAGATCTGA
                      ____________________________________________________________
consensus             ACGATGTCAGCGGTTTCCGTTTCTCCGGAGATGGCGCCGATCTTCTCGCCGGAGATCTGA
 
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rJMSF020L24-          AACTCCTGTCCCTCCCTCCAGCCAGATCCCCAGGGCTGCGCCGCTTCCTGGGCGGCCCCC
                      ____________________________________________________________
consensus             AACTCCTGTCCCTCCCTCCAGCCAGATCCCCAGGGCTGCGCCGCTTCCTGGGCGGCCCCC
 
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rJMSF020L24-          TGGCCGGCGACCTCTGGTTGACTTCTCCATCGTCATCCCTCCTCTCCGTCGCCGTCGTCG
JMSF020L24+                                                              CCGTCGTCG
                      ____________________________________________________________
consensus             TGGCCGGCGACCTCTGGTTGACTTCTCCATCGTCATCCCTCCTCTCCGTCGCCGTCGTCG
 
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rJMSF020L24-          AAATGCTCTCGGTGAAGCTACACAATTCAGAAGGCTCAGACACAATCTCCTCAGCCACAG
JMSF020L24+           AAATGCTCTCGGTGAAGCTACACAATTCAGAAGGCTCAGACACAATCTCCTCAGCCACAG
                      ____________________________________________________________
consensus             AAATGCTCTCGGTGAAGCTACACAATTCAGAAGGCTCAGACACAATCTCCTCAGCCACAG
 
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rJMSF020L24-          CCGTCGGCGGCACAACCCTCCGATCCCCCCCGTCTAGGTCTAGCTCAATCTCAGCCGCCG
JMSF020L24+           CCGTCGGCGGCACAACCCTCCGATCCCCCCCGTCTAGGTCTAGCTCAATCTCAGCCGCCG
                      ____________________________________________________________
consensus             CCGTCGGCGGCACAACCCTCCGATCCCCCCCGTCTAGGTCTAGCTCAATCTCAGCCGCCG
 
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rJMSF020L24-          GCACTTCAATCTTACGCTGTTGAAACTCAACCACTTTCTGCTGAGCATTGCTCTTCTTCT
JMSF020L24+           GCACTTCAATCTTACGCTGTTGAAACTCAACCACTTTCTGCTGAGCATTGCTCTTCTTCT
                      ____________________________________________________________
consensus             GCACTTCAATCTTACGCTGTTGAAACTCAACCACTTTCTGCTGAGCATTGCTCTTCTTCT
 
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rJMSF020L24-          CATCCGCCAACACTTGCAAAGCTAGGGGCTTTGAAACGGGGGTT                
JMSF020L24+           CATCCGCCAACACTTGCAAAGCTAGGGGCTTTGAAACGGGGGTTTCGGATAACACGACTT
                      ____________________________________________________________
consensus             CATCCGCCAACACTTGCAAAGCTAGGGGCTTTGAAACGGGGGTTTCGGATAACACGACTT
 
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JMSF020L24+           CTTTAACAGTTTCTTCGTCCACAGGCGGTGGAGCTCTGTCATTCTTGGCAGGATCCGGTA
                      ____________________________________________________________
consensus             CTTTAACAGTTTCTTCGTCCACAGGCGGTGGAGCTCTGTCATTCTTGGCAGGATCCGGTA
 
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JMSF020L24+           ATGGCGGCTGCTGCTGTTGATCTGTAGTAGAGGCTTTGGTGGTGCTTAAACAGCATCCCA
                      ____________________________________________________________
consensus             ATGGCGGCTGCTGCTGTTGATCTGTAGTAGAGGCTTTGGTGGTGCTTAAACAGCATCCCA
 
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JMSF020L24+           TCTTAAGCAAATACTTATCACACTATGATAAGACTTGATCTTAAGTAAGCAGAAGAAAAA
                      ____________________________________________________________
consensus             TCTTAAGCAAATACTTATCACACTATGATAAGACTTGATCTTAAGTAAGCAGAAGAAAAA
 
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JMSF020L24+           GCATGATGAATAGAAATGGTGTTTGGTTTAGGGAGTTGATGGGTTTTTAGGGTTGCAGAG
                      ____________________________________________________________
consensus             GCATGATGAATAGAAATGGTGTTTGGTTTAGGGAGTTGATGGGTTTTTAGGGTTGCAGAG
 
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JMSF020L24+           AGGAGAAGAGAAGAAGGTGGTTTGGAGTAGAGAGGGAAAGTGAACGGTGAAATCCGTGCC
                      ____________________________________________________________
consensus             AGGAGAAGAGAAGAAGGTGGTTTGGAGTAGAGAGGGAAAGTGAACGGTGAAATCCGTGCC