Contig 009295:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010H20Sequence359009295 (2)ref|XP_009629921.1|74.3PREDICTED: uncharacterized protein LOC104119982 [Nicotiana tomentosiformis]794012540 (2)emb|CDP16319.1|6e-79unnamed protein product [Coffea canephora]
JMSF020J02Sequence625009295 (2)ref|XP_009786191.1|212PREDICTED: uncharacterized protein LOC104234335 [Nicotiana sylvestris]805012540 (2)emb|CDP16319.1|9e-79unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF020J02+                                              ATCCTCCCGCACCTTGAGATATGCC
                      ____________________________________________________________
consensus                                                ATCCTCCCGCACCTTGAGATATGCC
 
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JMSF020J02+           CTCTCACAGTTTCCCCGCAATATGCAGGAGCTGCAAACATTTCCTTCATCAATGCCCAGA
                      ____________________________________________________________
consensus             CTCTCACAGTTTCCCCGCAATATGCAGGAGCTGCAAACATTTCCTTCATCAATGCCCAGA
 
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JMSF020J02+           TGCGCTCTTAGGCGCTTCCCAGAGTTGACAACTTTCCTATCCACGCTGGGGCATCCAGCT
                      ____________________________________________________________
consensus             TGCGCTCTTAGGCGCTTCCCAGAGTTGACAACTTTCCTATCCACGCTGGGGCATCCAGCT
 
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JMSF020J02+           TGTGCAATCACTTCAATATCTTTTTGGGACAGGTATCTTACAAGATCAAACTGATCACGG
                      ____________________________________________________________
consensus             TGTGCAATCACTTCAATATCTTTTTGGGACAGGTATCTTACAAGATCAAACTGATCACGG
 
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JMSF020J02+           GCGAAATTCAAACAGGCAGTGCGTATTTCGTTCGAGTCTTTGTTGCCCAATTCGATGTCT
                      ____________________________________________________________
consensus             GCGAAATTCAAACAGGCAGTGCGTATTTCGTTCGAGTCTTTGTTGCCCAATTCGATGTCT
 
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JMSF010H20+            GGAGACATGGGTTACCAACGCTGACGAAATATCCATTCTTGAGTAGCGTTTCCATCAAG
JMSF020J02+           CGGAGACATGGGTTACCAACGCTGACGAAATATCCATTCTTGAGTAGCGTTTCCATCAAG
                      ____________________________________________________________
consensus             CGGAGACATGGGTTACCAACGCTGACGAAATATCCATTCTTGAGTAGCGTTTCCATCAAG
 
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JMSF010H20+           TCAACCCACTCCGGGCACGGGTGAGATATAACTCCGGAATCAGATTCTGTCGGTCGCGAT
JMSF020J02+           TCAACCCACTCCGGGCACGGGTGAGATATAACTCCGGAATCAGATTCTGTCGGTCGCGAT
                      ____________________________________________________________
consensus             TCAACCCACTCCGGGCACGGGTGAGATATAACTCCGGAATCAGATTCTGTCGGTCGCGAT
 
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JMSF010H20+           ATCTCTCCATTCCCAGAAGAAAGTCGTTGAATTGGCTCCGGGGAGGACTGGAGGTCATCC
JMSF020J02+           ATCTCTCCATTCCCAGAAGAAAGTCGTTGAATTGGCTCCGGGGAGGACTGGAGGTCATCC
                      ____________________________________________________________
consensus             ATCTCTCCATTCCCAGAAGAAAGTCGTTGAATTGGCTCCGGGGAGGACTGGAGGTCATCC
 
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JMSF010H20+           TGGGCTTCTTCAAGAATGAATTGGATTGCGGGATTGGAGGGCGGGATTGTGCTATGGAAA
JMSF020J02+           TGGGCTTCTTCAAGAATGAATTGGATTGCGGGATTGGAGGGCGGGATTGTGCTATGGAAA
                      ____________________________________________________________
consensus             TGGGCTTCTTCAAGAATGAATTGGATTGCGGGATTGGAGGGCGGGATTGTGCTATGGAAA
 
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JMSF010H20+           TGGGAAGTGAGAATTTCGAGTTTGGGGATTTTTAGTGCTTGAAGAAGGGTTGAATTTCTA
JMSF020J02+           TGGGAAGTGAGAATTTCGAGTTTGGGGATTTTTAGTGCTTGAAGAAGGGTTGAATTTCTA
                      ____________________________________________________________
consensus             TGGGAAGTGAGAATTTCGAGTTTGGGGATTTTTAGTGCTTGAAGAAGGGTTGAATTTCTA
 
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JMSF010H20+           ATTGTTGATGAGAAGAGCTTTAACATCTGGTTGAGCTCTTGAGCCAGCCAGTGGAGGTTC
JMSF020J02+           ATTGTTGATGAGAAGAGCTTTAACATCTGGTTGAGCTCTTGAGCCAGCCAGTGGAGGTTC
                      ____________________________________________________________
consensus             ATTGTTGATGAGAAGAGCTTTAACATCTGGTTGAGCTCTTGAGCCAGCCAGTGGAGGTTC