Contig 009291:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008D22Sequence630009291 (3)ref|XP_004234161.1|2e-64PREDICTED: 65-kDa microtubule-associated protein 3 [Solanum lycopersicum]730013953 (3)emb|CDP05295.1|2e-40unnamed protein product [Coffea canephora]
JMSF019P22Sequence280009291 (3)ref|XP_006348061.1|3e-10PREDICTED: 65-kDa microtubule-associated protein 3-like [Solanum tuberosum]741013953 (3)emb|CDP05295.1|3e-40unnamed protein product [Coffea canephora]
JMSF027P16Sequence645009291 (3)ref|XP_006348061.1|3e-60PREDICTED: 65-kDa microtubule-associated protein 3-like [Solanum tuberosum]764013953 (3)emb|CDP05295.1|9e-51unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF008D22+                                                  TCAAGCTTTCTTAAAGATAGA
                      ____________________________________________________________
consensus                                                    TCAAGCTTTCTTAAAGATAGA
 
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JMFF008D22+           TCATTTTCATCCACTGCTGCGCTGCTAGAATGGTGTCCAGCAGACCTATGAATCTCACTT
JMSF027P16+                          GCTGCGCTGCTAGAATGGTGTCCAGCAGACCTATGAATCTCACTT
                      ____________________________________________________________
consensus             TCATTTTCATCCACTGCTGCGCTGCTAGAATGGTGTCCAGCAGACCTATGAATCTCACTT
 
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JMFF008D22+           TTGATCTTTTGTATCTGCTCTAATGTTTCAACAAATTGCTTCCTCCTTTCACACTTCCTC
JMSF027P16+           TTGATCTTTNGTATCTGCTCTAATGTTTCAACAAATTGCTTCCTCCTTTCACACTTCCTC
                      ____________________________________________________________
consensus             TTGATCTTTTGTATCTGCTCTAATGTTTCAACAAATTGCTTCCTCCTTTCACACTTCCTC
 
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JMFF008D22+           TTCCTCATCTCCTCAATTTCCGGAAGAATTGTTCTGAGTTCTGCCTTTAGGCCTTTCAAG
JMSF027P16+           TTCCTCATCTCCTCAATTTCCGGAAGAATTGTTCTGAGTTCTGCCTTTAGGCCTTTCAAG
                      ____________________________________________________________
consensus             TTCCTCATCTCCTCAATTTCCGGAAGAATTGTTCTGAGTTCTGCCTTTAGGCCTTTCAAG
 
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JMFF008D22+           TTTTGCTCACACTGTTGTCGAATGTGCACTGGTCGTTCCCCCATCGAAGAACAAATAGCT
JMSF027P16+           TTTTGCTCACACTGTTGTCGAATGTGCACTGGTCGTTCCCCCATCGAAGAACAAATAGCT
                      ____________________________________________________________
consensus             TTTTGCTCACACTGTTGTCGAATGTGCACTGGTCGTTCCCCCATCGAAGAACAAATAGCT
 
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JMFF008D22+           GCAAGTTCTGCTTCAGAATCTGCAATTGCCTGCCTTAGCTGAGCTCTACACTTGTTTGCT
JMSF027P16+           GCAAGTTCTGCTTCAGAATCTGCAATTGCCTGCCTTAGCTGAGCTCTACACTTGTTTGCT
                      ____________________________________________________________
consensus             GCAAGTTCTGCTTCAGAATCTGCAATTGCCTGCCTTAGCTGAGCTCTACACTTGTTTGCT
 
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JMFF008D22+           TGGTCTACTTTTCTCCTGTATACCTCGAGGCATTCTTGTTCAAGCTCAAGCAGCATTCTG
JMSF027P16+           TGGTCTACTTTTCTCCTGTATACCTCGAGGCATTCTTGTTCAAGCTCAAGCAGCATTCTG
                      ____________________________________________________________
consensus             TGGTCTACTTTTCTCCTGTATACCTCGAGGCATTCTTGTTCAAGCTCAAGCAGCATTCTG
 
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JMFF008D22+           TCTCTTTCGGAATCAGATTCCCCTACTTCATCCCATATTATCTGCAGTTCATATAGCAGC
JMSF027P16+           TCTCTTTCGGAATCAGATTCCCCTACTTCATCCCATATTATCTGCAGTTCATATAGCAGC
JMSF019P22+                  CGGAATCAGATTCCCCTACTTCATCCCATATTATCTGCAGTTCATATAGCAGC
                      ____________________________________________________________
consensus             TCTCTTTCGGAATCAGATTCCCCTACTTCATCCCATATTATCTGCAGTTCATATAGCAGC
 
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JMFF008D22+           GAACCACACGTTGTTTCCACTTGTGAAAGTGGATCCCCTTGTGAGCTAGACATGCCGGGG
JMSF027P16+           GAACCACACGTTGTTTCCACTTGTGAAAGTGGATCCCCTTGTGAGCTAGACATGCCGGGG
JMSF019P22+           GAACCACACGTTGTTTCCACTTGTGAAAGTGGATCCCCTTGTGAGCTAGACATGCCGGGG
                      ____________________________________________________________
consensus             GAACCACACGTTGTTTCCACTTGTGAAAGTGGATCCCCTTGTGAGCTAGACATGCCGGGG
 
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JMFF008D22+           AAATGTTGGGATCTGCAAATAATAACTCAAAGATGTGGAAATTCGATTGCCGAGCAAGCC
JMSF027P16+           AAATGTTGGGATCTGCAAATAATAACTCAAAGATGTGGAAATTCGATTGCCGAGCAAGCC
JMSF019P22+           AAATGTTGGGAT-------------CTCAAAGATGTGGAAATTCGATTGCCGAGCAAGCC
                      ____________________________________________________________
consensus             AAATGTTGGGATCTGCAAATAATAACTCAAAGATGTGGAAATTCGATTGCCGAGCAAGCC
 
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JMFF008D22+           AGAGAAAGAGTCGTTCGTTCAAATTCGGATTTGGGTTTCGGACACACGAAGCTTAGAGTA
JMSF027P16+           AGAGAAAGAGTCGTTCGTTCAAATTCGGATTTGGGTTTCGGACACACGAAGCTTAGAGTA
JMSF019P22+           AGAGAAAGAGTCGTTCGTTCAAATTCGGATTTGGGTTTCGGACACACGAAGCTTAGAGTA
                      ____________________________________________________________
consensus             AGAGAAAGAGTCGTTCGTTCAAATTCGGATTTGGGTTTCGGACACACGAAGCTTAGAGTA
 
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JMFF008D22+           GAGAAAGAT                                                   
JMSF027P16+           GAGAGAGATGGAGAAAGAGAGAGAGAGAGTGTAGTAGTTTAAGGAATTGGAAATTCGACC
JMSF019P22+           GAGAGAGATGGAGAAAGAGAGAGAGAGAGTGTAGTAGTTTAAGGAATTGGAAATTCGACC
                      ____________________________________________________________
consensus             GAGAGAGATGGAGAAAGAGAGAGAGAGAGTGTAGTAGTTTAAGGAATTGGAAATTCGACC