Contig 009285:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019F11Sequence545009285 (2)emb|CDP16905.1|4e-60unnamed protein product [Coffea canephora]755009285 (2)ref|XP_009624640.1|340PREDICTED: uncharacterized protein LOC104115672 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF019F11-                                                                     G
                      ____________________________________________________________
consensus                                                                        G
 
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rJMSF019F11-          TCTCCATGGATTGCTTACTATTGTGACAAACAGAAAAATGGCTCCTGCCCAAAGCATCTA
                      ____________________________________________________________
consensus             TCTCCATGGATTGCTTACTATTGTGACAAACAGAAAAATGGCTCCTGCCCAAAGCATCTA
 
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rJMSF019F11-          AGCTATCAAACAAATATGTTCCAACAAAAATATGAATATGATAGCATATTTTACCAAATA
                      ____________________________________________________________
consensus             AGCTATCAAACAAATATGTTCCAACAAAAATATGAATATGATAGCATATTTTACCAAATA
 
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rJMSF019F11-          CCATTAGCTTTGTCACCTGTACATGTGATAGATATTGTACATACCAAGGATACAACTTCC
                      ____________________________________________________________
consensus             CCATTAGCTTTGTCACCTGTACATGTGATAGATATTGTACATACCAAGGATACAACTTCC
 
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rJMSF019F11-          ACTTCATCTTCACAATTTCCACAGTTCCTGATCTGAAAGATTGTCCGTGCCATCTCCAAA
                      ____________________________________________________________
consensus             ACTTCATCTTCACAATTTCCACAGTTCCTGATCTGAAAGATTGTCCGTGCCATCTCCAAA
 
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rJMSF019F11-          TGTGGAGAGGGAAAAGGGGGCAATAGCCACATTGAATGTTCGAGAGCCTAAGCTATCAAT
                      ____________________________________________________________
consensus             TGTGGAGAGGGAAAAGGGGGCAATAGCCACATTGAATGTTCGAGAGCCTAAGCTATCAAT
 
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rJMSF019F11-          ATGCTTCATCTCAAAGTCACCCTCCATTCTTCCACTCGAGGTGCCTAATGGACATGCAGA
                      ____________________________________________________________
consensus             ATGCTTCATCTCAAAGTCACCCTCCATTCTTCCACTCGAGGTGCCTAATGGACATGCAGA
 
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rJMSF019F11-          TGAGTATTCAAAACCAGTATTAGGGAGTATAACTGGTTGTTCACCAATGACTCCAATTCC
                      ____________________________________________________________
consensus             TGAGTATTCAAAACCAGTATTAGGGAGTATAACTGGTTGTTCACCAATGACTCCAATTCC
 
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rJMSF019F11-          CCAAACATTCTCAGTTTTCCCATTTGCATCAGTGATGATCCAGTGCCTTCTGAGAAGTTG
                      ____________________________________________________________
consensus             CCAAACATTCTCAGTTTTCCCATTTGCATCAGTGATGATCCAGTGCCTTCTGAGAAGTTG
 
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rJMSF019F11-          AACTATACGATCTGAATTGTTGGTAATTCTTATTCTATAAGCAAAAAGATATAGGCCTTT
                      ____________________________________________________________
consensus             AACTATACGATCTGAATTGTTGGTAATTCTTATTCTATAAGCAAAAAGATATAGGCCTTT
 
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rJMSF019F11-          AGAAGGCTGACTTCGCCCTTCTATATATACGCTTCTAACTTGAACCCTGATTCCCAGTGT
JMSF019F11+                                                                  AGTGT
                      ____________________________________________________________
consensus             AGAAGGCTGACTTCGCCCTTCTATATATACGCTTCTAACTTGAACCCTGATTCCCAGTGT
 
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rJMSF019F11-          TGTTGCATCACTGGTGCATTTCAAAAGAGAGTGTGGTGCAACTTCCTTTAGCTCATCACG
JMSF019F11+           TGTTGCATCACTGGTGCATTTCAAAAGAGAGTGTGGTGCAACTTCCTTTAGCTCATCACG
                      ____________________________________________________________
consensus             TGTTGCATCACTGGTGCATTTCAAAAGAGAGTGTGGTGCAACTTCCTTTAGCTCATCACG
 
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rJMSF019F11-          ATACCTTGCTGCATCCTCAAACCTCTCGTCATCAATGGCCTCCTTCAACCGTCTCTTAAG
JMSF019F11+           ATACCTTGCTGCATCCTCAAACCTCTCGTCATCAATGGCCTCCTTCAACCGTCTCTTAAG
                      ____________________________________________________________
consensus             ATACCTTGCTGCATCCTCAAACCTCTCGTCATCAATGGCCTCCTTCAACCGTCTCTTAAG
 
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rJMSF019F11-          CCGCAAAACAGGCTCTTCATCCTCAA                                  
JMSF019F11+           CCGCAAAACAGGCTCTTCATCCTCAAATGATTTCAGAGAATCACGAAGCCTAGCAGCCTC
                      ____________________________________________________________
consensus             CCGCAAAACAGGCTCTTCATCCTCAAATGATTTCAGAGAATCACGAAGCCTAGCAGCCTC
 
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JMSF019F11+           TTCATAATCCTCAGATTTGGAGGCAACTTCCAGTTGCTGCTTCAACAAAGCATATGTTTG
                      ____________________________________________________________
consensus             TTCATAATCCTCAGATTTGGAGGCAACTTCCAGTTGCTGCTTCAACAAAGCATATGTTTG
 
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JMSF019F11+           GCTCCGCGAAAGGAACGAACTCCGATTCTGACTCTGAGTCGAACCCGGAATCGGTGAATC
                      ____________________________________________________________
consensus             GCTCCGCGAAAGGAACGAACTCCGATTCTGACTCTGAGTCGAACCCGGAATCGGTGAATC
 
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JMSF019F11+           GGAGGCGCCGCTATTACTTCCCTCAGAAGTACAGGCAACGACTCTACACCTCTTCAAATT
                      ____________________________________________________________
consensus             GGAGGCGCCGCTATTACTTCCCTCAGAAGTACAGGCAACGACTCTACACCTCTTCAAATT
 
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JMSF019F11+           ATCCCTGCAATTCAACCATTGCTTCTTATCCACATCAGCGAGTCTTAGACCGAGTCGAGT
                      ____________________________________________________________
consensus             ATCCCTGCAATTCAACCATTGCTTCTTATCCACATCAGCGAGTCTTAGACCGAGTCGAGT
 
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JMSF019F11+           CGACCCCTGCCGATTCTTCACCGCACTAAAATCGGCCACCACTTTGAAACTCAGAGATTG
                      ____________________________________________________________
consensus             CGACCCCTGCCGATTCTTCACCGCACTAAAATCGGCCACCACTTTGAAACTCAGAGATTG
 
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JMSF019F11+           CATTTTCCCTCCGATGATTCTTTCCGGGGGAATTTTCGCCGGAGGATTTTGCAATTTGTC
                      ____________________________________________________________
consensus             CATTTTCCCTCCGATGATTCTTTCCGGGGGAATTTTCGCCGGAGGATTTTGCAATTTGTC