Contig 009278:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009L05Sequence610010174 (4)741009278 (7)ref|XP_009616414.1|7e-20PREDICTED: nucleolar MIF4G domain-containing protein 1 [Nicotiana tomentosiform
JMFS056C05Sequence627009278 (7)
JMSF017O24Sequence226009278 (7)668024529gb|KHN19838.1|4e-54Cleavage and polyadenylation specificity factor subunit 2 [Glycine soja]
JMSF023L13Sequence660003673 (3)737009278 (7)ref|XP_009616414.1|9e-20PREDICTED: nucleolar MIF4G domain-containing protein 1 [Nicotiana tomentosiform
JMSF040A13Sequence679009278 (7)744010052 (4)emb|CDP05185.1|3e-101unnamed protein product [Coffea canephora]
JMSF045H09Sequence752009278 (7)803010052 (4)emb|CDP05185.1|1e-127unnamed protein product [Coffea canephora]
JMSF050B23Sequence621009278 (7)754010052 (4)emb|CDP05185.1|6e-114unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF009L05- ATTCTTTTACCCATCAAATTCCTCT
                      ____________________________________________________________
consensus ATTCTTTTACCCATCAAATTCCTCT
 
. : . : . : . : . : . :
rJMFF009L05- ATATGATTATAGCCATCGCAGCTAGCAGATATAGAATCAGATTTTCTAACCCTTTTATCA
                      ____________________________________________________________
consensus ATATGATTATAGCCATCGCAGCTAGCAGATATAGAATCAGATTTTCTAACCCTTTTATCA
 
. : . : . : . : . : . :
rJMFF009L05- ACTACTTCACCCACTACATTCACATCCACATCCACTAATTTCTTCTTCGTGCCTGAAGTG
rJMSF023L13- CCCACTACATTCACATCCACATCCACTAATTTCTTCTTCGTGCCTGAAGTG
                      ____________________________________________________________
consensus ACTACTTCACCCACTACATTCACATCCACATCCACTAATTTCTTCTTCGTGCCTGAAGTG
 
. : . : . : . : . : . :
rJMFF009L05- CGACTCTTTTTACCCTTTGAAAATTCTTGTACTTCACCAACAGAGTTAAGAATAGACGGA
rJMSF023L13- CGACCCTTTTTACCCTTTGAAAATTCTTGTACTTCATCAACAGAGTTAAGAATAGACGGA
                      ____________________________________________________________
consensus CGACTCTTTTTACCCTTTGAAAATTCTTGTACTTCATCAACAGAGTTAAGAATAGACGGA
 
. : . : . : . : . : . :
rJMFF009L05- ATTCCTTCAAATAACATATTAATATCATCACCACCACTCAGTTTCCCATCCTTGACTCTG
rJMSF023L13- ATTCCTTCAAATAACATATTAATATCATCACCACCACTCAGTTTCCCATCCTTGACTCTG
                      ____________________________________________________________
consensus ATTCCTTCAAATAACATATTAATATCATCACCACCACTCAGTTTCCCATCCTTGACTCTG
 
. : . : . : . : . : . :
rJMFF009L05- AGTTTCTTTGCAAGTTTCCTTTCCAGTCTCATATCATCCTCTGCAGAATTAACCCCTCCT
rJMSF023L13- AGTTTCTTTGCAAGTTTCCTTTCCAGTCTCATATCATCCTCTGCAGAATTAACCCCTCCT
                      ____________________________________________________________
consensus AGTTTCTTTGCAAGTTTCCTTTCCAGTCTCATATCATCCTCTGCAGAATTAACCCCTCCT
 
. : . : . : . : . : . :
rJMFF009L05- GTCATCTCCATTTCCAGATATTCATTGAACCTTGTGTTTGAACTTAAGTCACGTTTCCTT
rJMSF023L13- GTCATCTCCATTTCCAGATATTCATTGAACCTTGTGTTTGAACTTAAGTCACATTTCCTT
                      ____________________________________________________________
consensus GTCATCTCCATTTCCAGATATTCATTGAACCTTGTGTTTGAACTTAAGTCACGTTTCCTT
 
. : . : . : . : . : . :
rJMFF009L05- TTCAAATTGTTTGTCTTAACTTCTGTGTTTTCCACTACTGGAGAAAGCTCAATGTTATGT
rJMSF023L13- TTCAAATTGTTTGTCTTAACTTCTGTGTTTTCCACTACTGGAGAAAGCTCAATGTTATGT
                      ____________________________________________________________
consensus TTCAAATTGTTTGTCTTAACTTCTGTGTTTTCCACTACTGGAGAAAGCTCAATGTTATGT
 
. : . : . : . : . : . :
rJMFF009L05- TCTGCTTCACTATCAGAATCCTTGGACATAGCCTCACTACTTTTTGGGCCTACAATCCCC
rJMSF023L13- TCTGCTTCACTATCAGAATCCTTGGACATAGCCTCACTACTTTTTGGGCCTACAATCCCC
                      ____________________________________________________________
consensus TCTGCTTCACTATCAGAATCCTTGGACATAGCCTCACTACTTTTTGGGCCTACAATCCCC
 
. : . : . : . : . : . :
rJMFF009L05- TGCTGTATTTTTGCATGCTTTGACTTCAAAACTGGCAATGATTTATGATGATGTTGAAGC
rJMSF023L13- TGCTGTATTTTTGCATGCTTTGACTTCAAAACTGGCAATGATTTATGATGATGTTGAAGC
                      ____________________________________________________________
consensus TGCTGTATTTTTGCATGCTTTGACTTCAAAACTGGCAATGATTTATGATGATGTTGAAGC
 
. : . : . : . : . : . :
rJMFF009L05- CATGAATCAAACTTCTTCTTGTTCATCGATAAACGAGCTTCCTTCCTGCGTTCTCTTCTA
rJMSF023L13- CATGAATCAAACTTCTTCTTGTTCTTCGATAAACGGGCAGCCTTCCTGCGTTCTCTTCTA
                      ____________________________________________________________
consensus CATGAATCAAACTTCTTCTTGTTCTTCGATAAACGGGCTTCCTTCCTGCGTTCTCTTCTA
 
. : . : . : . : . : . :
rJMFF009L05- GATCTATTATCTTCATCCATTATCTAGTATCTGCTCAGAAATGAATATCAAC
rJMSF023L13- GATCTATTATCTTCATCCATTATCTAGTATCTGCTCAGCAATGAATATCAATCTGACGGT
                      ____________________________________________________________
consensus GATCTATTATCTTCATCCATTATCTAGTATCTGCTCAGCAATGAATATCAATCTGACGGT
 
. : . : . : . : . : . :
rJMSF023L13- GATGCTGGCAGACAGAGACTGAGCCGATGAGATTTCAAAAAACCAGAACGGTGGATGGCA
                      ____________________________________________________________
consensus GATGCTGGCAGACAGAGACTGAGCCGATGAGATTTCAAAAAACCAGAACGGTGGATGGCA
 
. : . : . : . : . : . :
rJMSF023L13- TATATGGCAAGGGTTCTGTTGCAGTCAGAGAAAGATTGTGAGGTTGCAGGCTTGTATCAC
JMSF040A13+ GTCAGAGAAAGATTGTGAGGTTGCAAGCTTGTATCAC
JMFS056C05+ AGCTTGTATCAC
JMSF045H09+ GTCAGAGAAAGATTGTGAGGTTGCAAGCTTGTATCAC
                      ____________________________________________________________
consensus TATATGGCAAGGGTTCTGTTGCAGTCAGAGAAAGATTGTGAGGTTGCAAGCTTGTATCAC
 
. : . : . : . : . : . :
rJMSF023L13- TATGTGCCTGCGTCTCATACTCTTAG
JMSF040A13+ TATGTGCCTGCGTCTCATACTCTTAGCTTTGCAGATTCCGGCATTGCTGTGCGAGACTGG
JMFS056C05+ TATGTGCCTGCGTCTCATACTCTTAGCTNTGCAGATTCCGGCATTGCTGTGCGAGACTGG
JMSF050B23+ ATTCCGGCATTGCTGTGCGAGACTGG
JMSF045H09+ TATGTGCCTGCGTCTCATACTCTTAGCTTTGCAGATTCCGGCATTGCTGTGCGAGACTGG
                      ____________________________________________________________
consensus TATGTGCCTGCGTCTCATACTCTTAGCTTTGCAGATTCCGGCATTGCTGTGCGAGACTGG
 
. : . : . : . : . : . :
JMSF040A13+ GGGAGGAGAGACCCTTGCAGATTCCGGCGTTGATGCGCAGCGAGACTGGGGGAGGAGGGG
JMFS056C05+ GGGAGGAGAGACCCTTGCAGATTCCGGCGTTGATGCGCAGCGAGACTGGGGGAGGAGGGG
JMSF050B23+ GGGAGGAGAGACCCTTGCAGATTCCGGCGTTGATGCGCAGCGAGACTGGGGGAGGAGGGG
JMSF045H09+ GGGAGGAGAGACCCTTGCAGATTCCGGCGTTGATGCGCAGCGAGACTGGGGGAGGAGGGG
                      ____________________________________________________________
consensus GGGAGGAGAGACCCTTGCAGATTCCGGCGTTGATGCGCAGCGAGACTGGGGGAGGAGGGG
 
. : . : . : . : . : . :
JMSF040A13+ TAAATTCCAACTCTACAAGTCTCGTAGTCTGGTGGACTGCTGGCCGTGGAGTCGAGGGCT
JMFS056C05+ TAAATTCCAACTCTACAAGTCTCGTAGTCTGGTGGACTGCTGGCCGTGGAGTCGAGGGCT
JMSF050B23+ TAAATTCCAACTCTACAAGTCTCGTAGTCTGGTGGACTGCTGGCCGTGGAGTCGAGGGCT
JMSF045H09+ TAAATTCCAACTCTACAAGTCTCGTAGTCTGGTGGACTGCTGGCCGTGGAGTCGAGGGCT
                      ____________________________________________________________
consensus TAAATTCCAACTCTACAAGTCTCGTAGTCTGGTGGACTGCTGGCCGTGGAGTCGAGGGCT
 
. : . : . : . : . : . :
JMSF040A13+ GGTGGACTGGAGCAGACGACGGCGAACTGGAGAAGAGTAGAAGACTGGCCGCCGGTGGAT
JMFS056C05+ GGTGGACTGGAGCAGACGACGGCGAACTGGAGAAGAGTAGAAGACTGGCCGCCGGTGGAT
JMSF050B23+ GGTGGACTGGAGCAGACGACGGCGAACTGGAGAAGAGTAGAAGACTGGCCGCCGGTGGAT
JMSF045H09+ GGTGGACTGGAGCAGACGACGGCGAACTGGAGAAGAGTAGAAGACTGGCCGCCGGTGGAT
                      ____________________________________________________________
consensus GGTGGACTGGAGCAGACGACGGCGAACTGGAGAAGAGTAGAAGACTGGCCGCCGGTGGAT
 
. : . : . : . : . : . :
JMSF040A13+ TACTGAGCAGACGACGGACTGACGCAGAGCTGGAGAAGACTCGTGGACGACTGGACGGTG
JMFS056C05+ TACTGAGCAGACGACGGACTGACGCAGAGCTGGAGAAGACTCGTGGACGACTGGACGGTG
JMSF050B23+ TACTGAGCAGACGACGGACTGACGCAGAGCTGGAGAAGACTCGTGGACGACTGGACGGTG
JMSF045H09+ TACTGAGCAGACGACGGACTGACGCAGAGCTGGAGAAGACTCGTGGACGACTGGACGGTG
                      ____________________________________________________________
consensus TACTGAGCAGACGACGGACTGACGCAGAGCTGGAGAAGACTCGTGGACGACTGGACGGTG
 
. : . : . : . : . : . :
JMSF040A13+ GACCTCGTGGTGGCCGGCCGCCGGACGCCGGTGGAGCAGTGAGTAGACGACGGGCTGACG
JMFS056C05+ GACCTCGTGGTGGCCGGCCGCCGGACGCCGGTGGAGCAGTGAGTAGACGACGGGCTGACG
JMSF050B23+ GACCTCGTGGTGGCCGGCCGCCGGACGCCGGTGGAGCAGTGAGTAGACGACGGGCTGACG
JMSF045H09+ GACCTCGTGGTGGCCGGCCGCCGGACGCCGGTGGAGCAGTGAGTAGACGACGGGCTGACG
                      ____________________________________________________________
consensus GACCTCGTGGTGGCCGGCCGCCGGACGCCGGTGGAGCAGTGAGTAGACGACGGGCTGACG
 
. : . : . : . : . : . :
JMSF040A13+ GAGAGGTGAGGCCTGAGGGAGACGAGACGAGTCGCAGTCGGCAGTGCTCCGTAGTAACGA
JMFS056C05+ GAGAGGTGAGGCCTGAGGGAGACGAGACGAGTCGCAGTCGGCAGTGCTCCGTAGTAACGA
JMSF050B23+ GAGAGGTGAGGCCTGAGGGAGACGAGACGAGTCGCAGTCGGCAGTGCT
JMSF045H09+ GAGAGGTGAGGCCTGAGGGAGACGAGACGAGTCGCAGTCGGCAGTGCTCCGTAGTAACGA
                      ____________________________________________________________
consensus GAGAGGTGAGGCCTGAGGGAGACGAGACGAGTCGCAGTCGGCAGTGCTCCGTAGTAACGA
 
. : . : . : . : . : . :
JMSF040A13+ TCTTCNTGAGAGTNTGATAAGTGTGGAGTCTGGAATTGANGATCTCCTTCCTCCTCCTAA
JMFS056C05+ TCTTCCTGAGAGTTTGATAAGTGTGGAGTCTGGAATTGACGATCTCCTTCCTCCTCCTAA
JMSF045H09+ TCTTCCTGAGAGTTTGATAAGTGTGGAGTCTGGAATTGACGATCTCCTTCCTCCTCCTAA
JMSF017O24+ TGATAAGTGTGGAGTCTGGAATTGACGATCTCCTTCCTCCTCCTAA
                      ____________________________________________________________
consensus TCTTCCTGAGAGTTTGATAAGTGTGGAGTCTGGAATTGACGATCTCCTTCCTCCTCCTAA
 
. : . : . : . : . : . :
JMSF040A13+ CTCCGGCGGCGGCAGANGATGCCCTCCTTCCTCCTCCTAACTCTGGCGGCGGCAGACGAA
JMFS056C05+ CTCCGGCGGCGGCAGACGATGCCCTCCTTCCTCCTCCTAACTCTGGCGGCGGCAGACGAA
JMSF045H09+ CTCCGGCGGCGGCAGACGATGCCCTCCTTCCTCCTCCTAACTCTGGCGGCGGCAGACGAA
JMSF017O24+ CTCCGGCGGCGGCAGACGATGCCCTCCTTCCTCCTCCTAACTCTGGCGGCGGCAGACGAA
                      ____________________________________________________________
consensus CTCCGGCGGCGGCAGACGATGCCCTCCTTCCTCCTCCTAACTCTGGCGGCGGCAGACGAA
 
. : . : . : . : . : . :
JMSF040A13+ GCCCTACGTCCTCCTCCTAACTCCGGCGGCGGCAGACGAAGCCTTACTTCCTCCTCCTAA
JMFS056C05+ GCCCTACGTCCTCCTCCTAACTCCGGCGGCGGCAGACGAAGCCTTACTTCCTCCTCCTAA
JMSF045H09+ GCCCTACGTCCTCCTCCTAACTCCGGCGGCGGCAGACGAAGCCTTACTTCCTCCTCCTAA
JMSF017O24+ GCCCTACGTCCTCCTCCTAACTCCGGCGGCGGCAGACGAAGCCTTACTTCCTCCTCCTAA
                      ____________________________________________________________
consensus GCCCTACGTCCTCCTCCTAACTCCGGCGGCGGCAGACGAAGCCTTACTTCCTCCTCCTAA
 
. : . : . : . : . : . :
JMSF040A13+ CTCCGGCGGCGGCAGACGAAGCTCTCCTTTTGTCGCTTT
JMFS056C05+ CTCCGGCGGCGGCAG
JMSF045H09+ CTCCGGCGGCGGCAGACGAAGCTCTCCTTTTGTCGCTTTTCCTCCTCCTGCCTC
JMSF017O24+ CTCCGGCGGCGGCAGACGAAGCTCTCCTTTTGTCGCTTTTCCTCCTCCTGCCTCTATTCC
                      ____________________________________________________________
consensus CTCCGGCGGCGGCAGACGAAGCTCTCCTTTTGTCGCTTTTCCTCCTCCTGCCTCTATTCC