Contig 009278:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF009L05-                                             ATTCTTTTACCCATCAAATTCCTCT
                      ____________________________________________________________
consensus                                                ATTCTTTTACCCATCAAATTCCTCT
 
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rJMFF009L05-          ATATGATTATAGCCATCGCAGCTAGCAGATATAGAATCAGATTTTCTAACCCTTTTATCA
                      ____________________________________________________________
consensus             ATATGATTATAGCCATCGCAGCTAGCAGATATAGAATCAGATTTTCTAACCCTTTTATCA
 
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rJMFF009L05-          ACTACTTCACCCACTACATTCACATCCACATCCACTAATTTCTTCTTCGTGCCTGAAGTG
rJMSF023L13-                   CCCACTACATTCACATCCACATCCACTAATTTCTTCTTCGTGCCTGAAGTG
                      ____________________________________________________________
consensus             ACTACTTCACCCACTACATTCACATCCACATCCACTAATTTCTTCTTCGTGCCTGAAGTG
 
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rJMFF009L05-          CGACTCTTTTTACCCTTTGAAAATTCTTGTACTTCACCAACAGAGTTAAGAATAGACGGA
rJMSF023L13-          CGACCCTTTTTACCCTTTGAAAATTCTTGTACTTCATCAACAGAGTTAAGAATAGACGGA
                      ____________________________________________________________
consensus             CGACTCTTTTTACCCTTTGAAAATTCTTGTACTTCATCAACAGAGTTAAGAATAGACGGA
 
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rJMFF009L05-          ATTCCTTCAAATAACATATTAATATCATCACCACCACTCAGTTTCCCATCCTTGACTCTG
rJMSF023L13-          ATTCCTTCAAATAACATATTAATATCATCACCACCACTCAGTTTCCCATCCTTGACTCTG
                      ____________________________________________________________
consensus             ATTCCTTCAAATAACATATTAATATCATCACCACCACTCAGTTTCCCATCCTTGACTCTG
 
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rJMFF009L05-          AGTTTCTTTGCAAGTTTCCTTTCCAGTCTCATATCATCCTCTGCAGAATTAACCCCTCCT
rJMSF023L13-          AGTTTCTTTGCAAGTTTCCTTTCCAGTCTCATATCATCCTCTGCAGAATTAACCCCTCCT
                      ____________________________________________________________
consensus             AGTTTCTTTGCAAGTTTCCTTTCCAGTCTCATATCATCCTCTGCAGAATTAACCCCTCCT
 
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rJMFF009L05-          GTCATCTCCATTTCCAGATATTCATTGAACCTTGTGTTTGAACTTAAGTCACGTTTCCTT
rJMSF023L13-          GTCATCTCCATTTCCAGATATTCATTGAACCTTGTGTTTGAACTTAAGTCACATTTCCTT
                      ____________________________________________________________
consensus             GTCATCTCCATTTCCAGATATTCATTGAACCTTGTGTTTGAACTTAAGTCACGTTTCCTT
 
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rJMFF009L05-          TTCAAATTGTTTGTCTTAACTTCTGTGTTTTCCACTACTGGAGAAAGCTCAATGTTATGT
rJMSF023L13-          TTCAAATTGTTTGTCTTAACTTCTGTGTTTTCCACTACTGGAGAAAGCTCAATGTTATGT
                      ____________________________________________________________
consensus             TTCAAATTGTTTGTCTTAACTTCTGTGTTTTCCACTACTGGAGAAAGCTCAATGTTATGT
 
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rJMFF009L05-          TCTGCTTCACTATCAGAATCCTTGGACATAGCCTCACTACTTTTTGGGCCTACAATCCCC
rJMSF023L13-          TCTGCTTCACTATCAGAATCCTTGGACATAGCCTCACTACTTTTTGGGCCTACAATCCCC
                      ____________________________________________________________
consensus             TCTGCTTCACTATCAGAATCCTTGGACATAGCCTCACTACTTTTTGGGCCTACAATCCCC
 
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rJMFF009L05-          TGCTGTATTTTTGCATGCTTTGACTTCAAAACTGGCAATGATTTATGATGATGTTGAAGC
rJMSF023L13-          TGCTGTATTTTTGCATGCTTTGACTTCAAAACTGGCAATGATTTATGATGATGTTGAAGC
                      ____________________________________________________________
consensus             TGCTGTATTTTTGCATGCTTTGACTTCAAAACTGGCAATGATTTATGATGATGTTGAAGC
 
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rJMFF009L05-          CATGAATCAAACTTCTTCTTGTTCATCGATAAACGAGCTTCCTTCCTGCGTTCTCTTCTA
rJMSF023L13-          CATGAATCAAACTTCTTCTTGTTCTTCGATAAACGGGCAGCCTTCCTGCGTTCTCTTCTA
                      ____________________________________________________________
consensus             CATGAATCAAACTTCTTCTTGTTCTTCGATAAACGGGCTTCCTTCCTGCGTTCTCTTCTA
 
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rJMFF009L05-          GATCTATTATCTTCATCCATTATCTAGTATCTGCTCAGAAATGAATATCAAC        
rJMSF023L13-          GATCTATTATCTTCATCCATTATCTAGTATCTGCTCAGCAATGAATATCAATCTGACGGT
                      ____________________________________________________________
consensus             GATCTATTATCTTCATCCATTATCTAGTATCTGCTCAGCAATGAATATCAATCTGACGGT
 
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rJMSF023L13-          GATGCTGGCAGACAGAGACTGAGCCGATGAGATTTCAAAAAACCAGAACGGTGGATGGCA
                      ____________________________________________________________
consensus             GATGCTGGCAGACAGAGACTGAGCCGATGAGATTTCAAAAAACCAGAACGGTGGATGGCA
 
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rJMSF023L13-          TATATGGCAAGGGTTCTGTTGCAGTCAGAGAAAGATTGTGAGGTTGCAGGCTTGTATCAC
JMSF040A13+                                  GTCAGAGAAAGATTGTGAGGTTGCAAGCTTGTATCAC
JMFS056C05+                                                           AGCTTGTATCAC
JMSF045H09+                                  GTCAGAGAAAGATTGTGAGGTTGCAAGCTTGTATCAC
                      ____________________________________________________________
consensus             TATATGGCAAGGGTTCTGTTGCAGTCAGAGAAAGATTGTGAGGTTGCAAGCTTGTATCAC
 
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rJMSF023L13-          TATGTGCCTGCGTCTCATACTCTTAG                                  
JMSF040A13+           TATGTGCCTGCGTCTCATACTCTTAGCTTTGCAGATTCCGGCATTGCTGTGCGAGACTGG
JMFS056C05+           TATGTGCCTGCGTCTCATACTCTTAGCTNTGCAGATTCCGGCATTGCTGTGCGAGACTGG
JMSF050B23+                                             ATTCCGGCATTGCTGTGCGAGACTGG
JMSF045H09+           TATGTGCCTGCGTCTCATACTCTTAGCTTTGCAGATTCCGGCATTGCTGTGCGAGACTGG
                      ____________________________________________________________
consensus             TATGTGCCTGCGTCTCATACTCTTAGCTTTGCAGATTCCGGCATTGCTGTGCGAGACTGG
 
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JMSF040A13+           GGGAGGAGAGACCCTTGCAGATTCCGGCGTTGATGCGCAGCGAGACTGGGGGAGGAGGGG
JMFS056C05+           GGGAGGAGAGACCCTTGCAGATTCCGGCGTTGATGCGCAGCGAGACTGGGGGAGGAGGGG
JMSF050B23+           GGGAGGAGAGACCCTTGCAGATTCCGGCGTTGATGCGCAGCGAGACTGGGGGAGGAGGGG
JMSF045H09+           GGGAGGAGAGACCCTTGCAGATTCCGGCGTTGATGCGCAGCGAGACTGGGGGAGGAGGGG
                      ____________________________________________________________
consensus             GGGAGGAGAGACCCTTGCAGATTCCGGCGTTGATGCGCAGCGAGACTGGGGGAGGAGGGG
 
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JMSF040A13+           TAAATTCCAACTCTACAAGTCTCGTAGTCTGGTGGACTGCTGGCCGTGGAGTCGAGGGCT
JMFS056C05+           TAAATTCCAACTCTACAAGTCTCGTAGTCTGGTGGACTGCTGGCCGTGGAGTCGAGGGCT
JMSF050B23+           TAAATTCCAACTCTACAAGTCTCGTAGTCTGGTGGACTGCTGGCCGTGGAGTCGAGGGCT
JMSF045H09+           TAAATTCCAACTCTACAAGTCTCGTAGTCTGGTGGACTGCTGGCCGTGGAGTCGAGGGCT
                      ____________________________________________________________
consensus             TAAATTCCAACTCTACAAGTCTCGTAGTCTGGTGGACTGCTGGCCGTGGAGTCGAGGGCT
 
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JMSF040A13+           GGTGGACTGGAGCAGACGACGGCGAACTGGAGAAGAGTAGAAGACTGGCCGCCGGTGGAT
JMFS056C05+           GGTGGACTGGAGCAGACGACGGCGAACTGGAGAAGAGTAGAAGACTGGCCGCCGGTGGAT
JMSF050B23+           GGTGGACTGGAGCAGACGACGGCGAACTGGAGAAGAGTAGAAGACTGGCCGCCGGTGGAT
JMSF045H09+           GGTGGACTGGAGCAGACGACGGCGAACTGGAGAAGAGTAGAAGACTGGCCGCCGGTGGAT
                      ____________________________________________________________
consensus             GGTGGACTGGAGCAGACGACGGCGAACTGGAGAAGAGTAGAAGACTGGCCGCCGGTGGAT
 
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JMSF040A13+           TACTGAGCAGACGACGGACTGACGCAGAGCTGGAGAAGACTCGTGGACGACTGGACGGTG
JMFS056C05+           TACTGAGCAGACGACGGACTGACGCAGAGCTGGAGAAGACTCGTGGACGACTGGACGGTG
JMSF050B23+           TACTGAGCAGACGACGGACTGACGCAGAGCTGGAGAAGACTCGTGGACGACTGGACGGTG
JMSF045H09+           TACTGAGCAGACGACGGACTGACGCAGAGCTGGAGAAGACTCGTGGACGACTGGACGGTG
                      ____________________________________________________________
consensus             TACTGAGCAGACGACGGACTGACGCAGAGCTGGAGAAGACTCGTGGACGACTGGACGGTG
 
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JMSF040A13+           GACCTCGTGGTGGCCGGCCGCCGGACGCCGGTGGAGCAGTGAGTAGACGACGGGCTGACG
JMFS056C05+           GACCTCGTGGTGGCCGGCCGCCGGACGCCGGTGGAGCAGTGAGTAGACGACGGGCTGACG
JMSF050B23+           GACCTCGTGGTGGCCGGCCGCCGGACGCCGGTGGAGCAGTGAGTAGACGACGGGCTGACG
JMSF045H09+           GACCTCGTGGTGGCCGGCCGCCGGACGCCGGTGGAGCAGTGAGTAGACGACGGGCTGACG
                      ____________________________________________________________
consensus             GACCTCGTGGTGGCCGGCCGCCGGACGCCGGTGGAGCAGTGAGTAGACGACGGGCTGACG
 
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JMSF040A13+           GAGAGGTGAGGCCTGAGGGAGACGAGACGAGTCGCAGTCGGCAGTGCTCCGTAGTAACGA
JMFS056C05+           GAGAGGTGAGGCCTGAGGGAGACGAGACGAGTCGCAGTCGGCAGTGCTCCGTAGTAACGA
JMSF050B23+           GAGAGGTGAGGCCTGAGGGAGACGAGACGAGTCGCAGTCGGCAGTGCT            
JMSF045H09+           GAGAGGTGAGGCCTGAGGGAGACGAGACGAGTCGCAGTCGGCAGTGCTCCGTAGTAACGA
                      ____________________________________________________________
consensus             GAGAGGTGAGGCCTGAGGGAGACGAGACGAGTCGCAGTCGGCAGTGCTCCGTAGTAACGA
 
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JMSF040A13+           TCTTCNTGAGAGTNTGATAAGTGTGGAGTCTGGAATTGANGATCTCCTTCCTCCTCCTAA
JMFS056C05+           TCTTCCTGAGAGTTTGATAAGTGTGGAGTCTGGAATTGACGATCTCCTTCCTCCTCCTAA
JMSF045H09+           TCTTCCTGAGAGTTTGATAAGTGTGGAGTCTGGAATTGACGATCTCCTTCCTCCTCCTAA
JMSF017O24+                         TGATAAGTGTGGAGTCTGGAATTGACGATCTCCTTCCTCCTCCTAA
                      ____________________________________________________________
consensus             TCTTCCTGAGAGTTTGATAAGTGTGGAGTCTGGAATTGACGATCTCCTTCCTCCTCCTAA
 
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JMSF040A13+           CTCCGGCGGCGGCAGANGATGCCCTCCTTCCTCCTCCTAACTCTGGCGGCGGCAGACGAA
JMFS056C05+           CTCCGGCGGCGGCAGACGATGCCCTCCTTCCTCCTCCTAACTCTGGCGGCGGCAGACGAA
JMSF045H09+           CTCCGGCGGCGGCAGACGATGCCCTCCTTCCTCCTCCTAACTCTGGCGGCGGCAGACGAA
JMSF017O24+           CTCCGGCGGCGGCAGACGATGCCCTCCTTCCTCCTCCTAACTCTGGCGGCGGCAGACGAA
                      ____________________________________________________________
consensus             CTCCGGCGGCGGCAGACGATGCCCTCCTTCCTCCTCCTAACTCTGGCGGCGGCAGACGAA
 
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JMSF040A13+           GCCCTACGTCCTCCTCCTAACTCCGGCGGCGGCAGACGAAGCCTTACTTCCTCCTCCTAA
JMFS056C05+           GCCCTACGTCCTCCTCCTAACTCCGGCGGCGGCAGACGAAGCCTTACTTCCTCCTCCTAA
JMSF045H09+           GCCCTACGTCCTCCTCCTAACTCCGGCGGCGGCAGACGAAGCCTTACTTCCTCCTCCTAA
JMSF017O24+           GCCCTACGTCCTCCTCCTAACTCCGGCGGCGGCAGACGAAGCCTTACTTCCTCCTCCTAA
                      ____________________________________________________________
consensus             GCCCTACGTCCTCCTCCTAACTCCGGCGGCGGCAGACGAAGCCTTACTTCCTCCTCCTAA
 
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JMSF040A13+           CTCCGGCGGCGGCAGACGAAGCTCTCCTTTTGTCGCTTT                     
JMFS056C05+           CTCCGGCGGCGGCAG                                             
JMSF045H09+           CTCCGGCGGCGGCAGACGAAGCTCTCCTTTTGTCGCTTTTCCTCCTCCTGCCTC      
JMSF017O24+           CTCCGGCGGCGGCAGACGAAGCTCTCCTTTTGTCGCTTTTCCTCCTCCTGCCTCTATTCC
                      ____________________________________________________________
consensus             CTCCGGCGGCGGCAGACGAAGCTCTCCTTTTGTCGCTTTTCCTCCTCCTGCCTCTATTCC