| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF025J06 | Sequence | 596 | 009277 (6) | dbj|BAO57286.1| | 2e-123 | V-type proton ATPase subunit [Ipomoea nil] | 784 | 013724 (5) | dbj|BAO57286.1| | 5e-102 | V-type proton ATPase subunit [Ipomoea nil] |
| JMFF043C10 | Sequence | 641 | 009277 (6) | dbj|BAO57286.1| | 5e-135 | V-type proton ATPase subunit [Ipomoea nil] | 611 | 015968 | dbj|BAO57286.1| | 2e-52 | V-type proton ATPase subunit [Ipomoea nil] |
| JMSF017N06 | Sequence | 529 | 009277 (6) | dbj|BAO57286.1| | 4e-90 | V-type proton ATPase subunit [Ipomoea nil] | 775 | 013724 (5) | dbj|BAO57286.1| | 2e-109 | V-type proton ATPase subunit [Ipomoea nil] |
| JMSF034D12 | Sequence | 690 | 009277 (6) | dbj|BAO57286.1| | 6e-129 | V-type proton ATPase subunit [Ipomoea nil] | 752 | 013724 (5) | dbj|BAO57286.1| | 3e-98 | V-type proton ATPase subunit [Ipomoea nil] |
| JMSF036N18 | Sequence | 666 | 009277 (6) | dbj|BAO57286.1| | 4e-107 | V-type proton ATPase subunit [Ipomoea nil] | 681 | 013724 (5) | dbj|BAO57286.1| | 2e-84 | V-type proton ATPase subunit [Ipomoea nil] |
| JMSF042C24 | Sequence | 309 | 009277 (6) | dbj|BAO57286.1| | 8e-35 | V-type proton ATPase subunit [Ipomoea nil] | 777 | 013724 (5) | dbj|BAO57286.1| | 9e-102 | V-type proton ATPase subunit [Ipomoea nil] |
This contig is upended
. : . : . : . : . : . :
JMSF034D12+ AGCTAGCCAACCAGTCTTTCTG
JMFF043C10+ ATAGGAAGTGAGTGTCTCATAGCTAGCCAACCAGTCTTTCTG
____________________________________________________________
consensus ATAGGAAGTGAGTGTCTCATAGCTAGCCAACCAGTCTTTCTG
. : . : . : . : . : . :
JMSF034D12+ TGAAAACTTGGAAACAACAGCAAGGAGGGTTGTTAGGTGTTCCGAGGTAATTAAATCTTC
JMFF025J06+ ATCTTC
JMFF043C10+ TGAAAACTTGGAAACAACAGCAAGGAGGGTTGTTAGGTGTTCCGAGGTAATTAAATCTTC
____________________________________________________________
consensus TGAAAACTTGGAAACAACAGCAAGGAGGGTTGTTAGGTGTTCCGAGGTAATTAAATCTTC
. : . : . : . : . : . :
JMSF034D12+ AGGCTTAACCAAATTGGAAAGATCTCGGACCGCTAAACTTCCTGTCTGCTTACGATTTAT
JMFF025J06+ AGGCTTAACCAAATTGGAAAGATCTCGGACCGCTAAACTTCCTGTCTGCTTACGATTTAT
JMSF036N18+ GGCTTAACCAAATTGGAAAGATCTCGGACCGCTAAACTTCCTGTCTGCTTACGATTTAT
JMFF043C10+ AGGCTTAACCAAATTGGAAAGATCTCGGACCGCTAAACTTCCTGTCTGCTTACGATTTAT
____________________________________________________________
consensus AGGCTTAACCAAATTGGAAAGATCTCGGACCGCTAAACTTCCTGTCTGCTTACGATTTAT
. : . : . : . : . : . :
JMSF034D12+ GGCATTAAGCTGGCTACGCACATTGCTGTACTCAGCAACCCGAACCTTAAGATCATCCTC
JMFF025J06+ GGCATTAAGCTGGCTACGCACATTGCTGTACTCAGCAACCCGAACCTTAAGATCATCCTC
JMSF036N18+ GGCATTAAGCTGGCTACGCACATTGCTGTACTCAGCAACCCGAACCTTAAGATCATCCTC
JMFF043C10+ GGCATTAAGCTGGCTACGCACATTGCTGTACTCAGCAACCCGAACCTTAAGATCATCCTC
JMSF017N06+ GGCTACGCACATTGCTGTACTCAGCAACCCGAACCTTAAGATCATCCTC
____________________________________________________________
consensus GGCATTAAGCTGGCTACGCACATTGCTGTACTCAGCAACCCGAACCTTAAGATCATCCTC
. : . : . : . : . : . :
JMSF034D12+ AATCTTCGCAACTTGGGAGTGAACTCCATCTACAGTCTCCTTCAGAGGTGACATTGTAGG
JMFF025J06+ AATCTTCGCAACTTGGGAGTGAACTCCATCTACAGTCTCCTTCAGAGGTGACATTGTAGG
JMSF036N18+ AATCTTCGCAACTTGGGAGTGAACTCCATCTACAGTCTCCTTCAGAGGTGACATTGTAGG
JMFF043C10+ AATCTTCGCAACTTGGGAGTGAACTCCATCTACAGTCTCCTTCAGAGGTGACATTGTAGG
JMSF017N06+ AATCTTCGCAACTTGGGAGTGAACTCCATCTACAGTCTCCTTCAGAGGTGACATTGTAGG
____________________________________________________________
consensus AATCTTCGCAACTTGGGAGTGAACTCCATCTACAGTCTCCTTCAGAGGTGACATTGTAGG
. : . : . : . : . : . :
JMSF034D12+ ATACTTAGCCTCATCCCACACAAATCTAGTGAGGTAGGAGTCAACAGGAACCCCATCTAC
JMFF025J06+ ATACTTAGCCTCATCCCACACAAATCTAGTGAGGTAGGAGTCAACAGGAACCCCATCTAC
JMSF036N18+ ATACTTAGCCTCATCCCACACAAATCTAGTGAGGTAGGAGTCAACAGGAACCCCATCTAC
JMFF043C10+ ATACTTAGCCTCATCCCACACAAATCTAGTGAGGTAGGAGTCAACAGGAACCCCATCTAC
JMSF017N06+ ATACTTAGCCTCATCCCACACAAATCTAGTGAGGTAGGAGTCAACAGGAACCCCATCTAC
____________________________________________________________
consensus ATACTTAGCCTCATCCCACACAAATCTAGTGAGGTAGGAGTCAACAGGAACCCCATCTAC
. : . : . : . : . : . :
JMSF034D12+ AGTGAGAGAACTGCTGGCAACACCAGAAGCCCTCTCCAACTCCTCGATCTGGCGCCGTAT
JMFF025J06+ AGTGAGAGAACTGCTGGCAACACCAGAAGCCCTCTCCAACTCCTCGATCTGGCGCCGTAT
JMSF036N18+ AGTGAGAGAACTGCTGGCAACACCAGAAGCCCTCTCCAACTCCTCGATCTGGCGCCGTAT
JMFF043C10+ AGTGAGAGAACTGCTGGCAACACCAGAAGCCCTCTCCAACTCCTCGATCTGGCGCCGTAT
JMSF042C24+ GCGCCGTAT
JMSF017N06+ AGTGAGAGAACTGCTGGCAACACCAGAAGCCCTCTCCAACTCCTCGATCTGGCGCCGTAT
____________________________________________________________
consensus AGTGAGAGAACTGCTGGCAACACCAGAAGCCCTCTCCAACTCCTCGATCTGGCGCCGTAT
. : . : . : . : . : . :
JMSF034D12+ CTTCGAACACACCCCTTCAATGAAGTTGTTCGACTTGACGAGGTCGTCACTGAGCGCGAG
JMFF025J06+ CTTCGAACACACCCCTTCAATGAAGTTGTTCGACTTGACGAGGTCGTCACTGAGCGCGAG
JMSF036N18+ CTTCGAACACACCCCTTCAATGAAGTTGTTCGACTTGACGAGGTCGTCACTGAGCGCGAG
JMFF043C10+ CTTCGAACACACCCCTTCAATGAAGTTGTTCGACTTGACGAGGTCGTCACTGAGCGCGAG
JMSF042C24+ CTTCGAACACACCCCTTCAATGAAGTTGTTCGACTTGACGAGGTCGTCACTGAGCGCGAG
JMSF017N06+ CTTCGAACACACCCCTTCAATGAAGTTGTTCGACTTGACGAGGTCGTCACTGAGCGCGAG
____________________________________________________________
consensus CTTCGAACACACCCCTTCAATGAAGTTGTTCGACTTGACGAGGTCGTCACTGAGCGCGAG
. : . : . : . : . : . :
JMSF034D12+ GAGCAAATCCAATGTACCGACGCGGAGATTGGGGATGTTGAATCTGTAGAGGGGAGTGTC
JMFF025J06+ GAGCAAATCCAATGTACCGACGCGGAGATTGGGGATGTTGAATCTGTAGAGGGGAGTGTC
JMSF036N18+ GAGCAAATCCAATGTACCGACGCGGAGATTGGGGATGTTGAATCTGTAGAGGGGAGTGTC
JMFF043C10+ GAGCAAATCCAATGTACCGACGCGGAGATTGGGGATGTTGAATCTGTAGAGGGGAGTGTC
JMSF042C24+ GAGCAAATCCAATGTACCGACGCGGAGATTGGGGATGTTGAATCTGTAGAGGGGAGTGTC
JMSF017N06+ GAGCAAATCCAATGTACCGACGCGGAGATTGGGGATGTTGAATCTGTAGAGGGGAGTGTC
____________________________________________________________
consensus GAGCAAATCCAATGTACCGACGCGGAGATTGGGGATGTTGAATCTGTAGAGGGGAGTGTC
. : . : . : . : . : . :
JMSF034D12+ GAATGAGTTTTTGGAAATTGAGTCCTGAAGGCGGCTCCAAAGAGACGTGGCGGAGGAGCT
JMFF025J06+ GAATGAGTTTTTGGAAATTGAGTCCTGAAGGCGGCTCCAAAGAGACGTGGCGGAGGAGCT
JMSF036N18+ GAATGAGTTTTTGGAAATTGAGTCCTGAAGGCGGCTCCAAAGAGACGTGGCGGAGGAGCT
JMFF043C10+ GAATGAGTTTTTGGAAATTGAGTCCTGAAGGCGGCTCCAAAGAGACGTGGCGGAGGAGCT
JMSF042C24+ GAATGAGTTTTTGGAAATTGAGTCCTGAAGGCGGCTCCAAAGAGACGTGGCGGAGGAGCT
JMSF017N06+ GAATGAGTTTTTGGAAATTGAGTCCTGAAGGCGGCTCCAAAGAGACGTGGCGGAGGAGCT
____________________________________________________________
consensus GAATGAGTTTTTGGAAATTGAGTCCTGAAGGCGGCTCCAAAGAGACGTGGCGGAGGAGCT
. : . : . : . : . : . :
JMSF034D12+ TTGCTGAACGGGGAGAGACACCACCCAATATCGAGACGCCATT
JMFF025J06+ TTGCTGAACGGGGAGAGACACCACCCAATATCGAGACGCCATTTCGATCGAATTAGATT
JMSF036N18+ TTGCTGAACGGGGAGAGACACCACCCAATATCGAGACGCCATT
JMFF043C10+ TTGCTGAACGGGGAGAGACACCACCCAATATCGAGACGCCATTTCGATCGAATTAGATT
JMSF042C24+ TTGCTGAACGGGGAGAGACACCACCCAATATCGAGACGCCATTTCGATCGAATTAGATTA
JMSF017N06+ TTGCTGAACGGGGAGAGACACCACCCAATATCGAGACGCCATTTCGATCGAATTAGATTA
____________________________________________________________
consensus TTGCTGAACGGGGAGAGACACCACCCAATATCGAGACGCCATTTCGATCGAATTAGATTA
. : . : . : . : . : . :
JMSF042C24+ AGATCAGATCGATCAGATCTCTCTTCTTCTTTTAATCGAATTTGATAAAGGAAACAGGT
JMSF017N06+ AGATCAGATCGATCAGATCTCTCTTCTTCTTTTAATCGAATTTGATAAAGGAAACAGGTC
____________________________________________________________
consensus AGATCAGATCGATCAGATCTCTCTTCTTCTTTTAATCGAATTTGATAAAGGAAACAGGTC