Contig 009276:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035L24Sequence590009276 (3)ref|XP_009781367.1|7e-56PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondr693005470 (4)ref|XP_009616314.1|1e-66PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondr
JMSF017N01Sequence237009276 (3)779005470 (4)ref|XP_003556404.1|4e-90PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondr
JMSF037O13Sequence465009276 (3)ref|XP_009616314.1|1e-26PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondr653005470 (4)ref|XP_009616314.1|7e-65PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondr

Alignment

This contig is upended


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JMFF035L24+                                      TTCTCAGGAGGCTCACTGCCGTATATCTGCAGA
                      ____________________________________________________________
consensus                                        TTCTCAGGAGGCTCACTGCCGTATATCTGCAGA
 
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JMFF035L24+           GTCTCCCAGAAAGAGGACTTCAGGCGCTTCCCATACTCCTCCTCTTCCGACATCTTCTTA
                      ____________________________________________________________
consensus             GTCTCCCAGAAAGAGGACTTCAGGCGCTTCCCATACTCCTCCTCTTCCGACATCTTCTTA
 
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JMFF035L24+           TCGGAATTCTTTCCCGTGACATTAGTTTTTACCCTCCCAATCTCGAAGAAACTTCCCTGG
                      ____________________________________________________________
consensus             TCGGAATTCTTTCCCGTGACATTAGTTTTTACCCTCCCAATCTCGAAGAAACTTCCCTGG
 
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JMFF035L24+           AGAGGCGCCATCTTGTACGGCCGGAAATAGTAGCCGGTCTTACAATTGGGGCAGATATTC
                      ____________________________________________________________
consensus             AGAGGCGCCATCTTGTACGGCCGGAAATAGTAGCCGGTCTTACAATTGGGGCAGATATTC
 
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JMFF035L24+           ACGGCGTGATAAGGGCCGCCGGGTTTCGAATTAGCATTAGTACTACTAGCGTTACTGTTA
                      ____________________________________________________________
consensus             ACGGCGTGATAAGGGCCGCCGGGTTTCGAATTAGCATTAGTACTACTAGCGTTACTGTTA
 
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JMFF035L24+           CCGTTAGTTCCATCATTGTCGACGGCGACGGAGCTAGCTAAAACGCTAGCGTTTTTTCCG
JMSF037O13+                                                                 TTTCCG
                      ____________________________________________________________
consensus             CCGTTAGTTCCATCATTGTCGACGGCGACGGAGCTAGCTAAAACGCTAGCGTTTTTTCCG
 
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JMFF035L24+           TTATTACTATCACAAGCGGAATTCGAATCGGAAGGAGGCGCCGGAATAAGGTGGGGGTGG
JMSF037O13+           TTNTTANTATCACAAGCGGAATTNGAATCGGAAGGAGGCGCCGGAATAAGGTGGGGGTGG
                      ____________________________________________________________
consensus             TTATTACTATCACAAGCGGAATTCGAATCGGAAGGAGGCGCCGGAATAAGGTGGGGGTGG
 
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JMFF035L24+           CGGTTGGTGAAGAGGAGATCCATGTGCTTGGAGCAACGCGGACAGTTCACCTCCGCCCTA
JMSF037O13+           CGGTTGGTGAAGAGGAGATCCATGTGNTGGGAGCAACGCGGACAGTTCACCTCCGCCCTA
                      ____________________________________________________________
consensus             CGGTTGGTGAAGAGGAGATCCATGTGCTTGGAGCAACGCGGACAGTTCACCTCCGCCCTA
 
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JMFF035L24+           ATCCTCCTAGTCTCATCGGAGGAACCGCCTCGGTCCCACTTGTACCTCGCCTGAACTCCG
JMSF037O13+           ATCCTCCTAGTCTCATCGGAGGAACCGCCTCGGTCCCACTTGTACCTCGCCTGAACTCCG
                      ____________________________________________________________
consensus             ATCCTCCTAGTCTCATCGGAGGAACCGCCTCGGTCCCACTTGTACCTCGCCTGAACTCCG
 
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JMFF035L24+           ATTACCGACTCTCTCCGCCGAAAGTGCAGGCAGTTCACAAACCCCCGCGTCCGCCTCCGC
JMSF037O13+           ATTACCGACTCTCTCCGCCGAAAGTGCAGGCAGTTCACAAACCCCCGCGTCCGCCTCCGC
                      ____________________________________________________________
consensus             ATTACCGACTCTCTCCGCCGAAAGTGCAGGCAGTTCACAAACCCCCGCGTCCGCCTCCGC
 
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JMFF035L24+           CAATCCTCATTCCAAGT                                           
JMSF037O13+           CAATCCTCATTCCAAGTCGACGCTGCTCCCGCCGCCGGCGCCGCCGTCCTCCGCCTTCTA
JMSF017N01+                 TCATTCCAAGTCGACGCTGCTCCCGCCGCCGGCGCCGCCGTCCTCCGCCTTCTA
                      ____________________________________________________________
consensus             CAATCCTCATTCCAAGTCGACGCTGCTCCCGCCGCCGGCGCCGCCGTCCTCCGCCTTCTA
 
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JMSF037O13+           CAGGCAGTTATAACCGCCGCCTCTTTCAGCTTCCTCCATCTCCATATCCCGGACATCTCT
JMSF017N01+           CAGGCAGTTATAACCGCCGCCTCTTTCAGCTTCCTCCATCTCCATATCCCGGACATCTCT
                      ____________________________________________________________
consensus             CAGGCAGTTATAACCGCCGCCTCTTTCAGCTTCCTCCATCTCCATATCCCGGACATCTCT
 
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JMSF037O13+           ACTCCCGATTCAAAAACCACCGCCTGGAAAGCATTCACTTCCTATAGACCTGAAATACGT
JMSF017N01+           ACTCCCGATTCAAAAACCACCGCCTGGAAAGCATTCACTTCCTATAGACCTGAAATACGT
                      ____________________________________________________________
consensus             ACTCCCGATTCAAAAACCACCGCCTGGAAAGCATTCACTTCCTATAGACCTGAAATACGT
 
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JMSF037O13+           GAAATTGGATCTACGTCGAGGAATCAACCGTTCTGAGC                      
JMSF017N01+           GAAATTGGATCTACGTCGAGGAATCAACCGTTCTGAGCACCGGAAATCTGGCCAAAACCC
                      ____________________________________________________________
consensus             GAAATTGGATCTACGTCGAGGAATCAACCGTTCTGAGCACCGGAAATCTGGCCAAAACCC