Contig 009272:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS005C02Sequence472009272 (4)ref|XP_009604470.1|3e-09PREDICTED: serine/threonine-protein kinase AFC2 isoform X1 [Nicotiana tomentosi
JMFS005G07Sequence472009272 (4)ref|XP_009604470.1|3e-09PREDICTED: serine/threonine-protein kinase AFC2 isoform X1 [Nicotiana tomentosi
JMFS128H05Sequence131009272 (4)
JMSF016F06Sequence241009272 (4)ref|XP_009604470.1|5e-10PREDICTED: serine/threonine-protein kinase AFC2 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS005G07+ TCAAAATTT
JMFS005C02+ TCAAAATTT
                      ____________________________________________________________
consensus TCAAAATTT
 
. : . : . : . : . : . :
JMFS005G07+ TGGCATGTTTACTATGCAATTAAGATTTAAATACCGCACAAGATACACGGAGCTTACAAC
JMFS005C02+ TGGCATGTTTACTATGCAATTAAGATTTAAATACCGCACAAGATACACGGAGCTTACAAC
                      ____________________________________________________________
consensus TGGCATGTTTACTATGCAATTAAGATTTAAATACCGCACAAGATACACGGAGCTTACAAC
 
. : . : . : . : . : . :
JMFS005G07+ AACCTTAATCCCTAAATATCTAACTTAAAAATTATGATTTATAGATAGATATGTATATAG
JMFS005C02+ AACCTTAATCCCTAAATATCTAACTTAAAAATTATGATTTATAGATAGATATGTATATAG
                      ____________________________________________________________
consensus AACCTTAATCCCTAAATATCTAACTTAAAAATTATGATTTATAGATAGATATGTATATAG
 
. : . : . : . : . : . :
JMFS005G07+ ATCTTTACATAGTCAAAACTATGTGCATAAAATTTCAGGAAAAACACATGTTAATCATAC
JMFS005C02+ ATCTTTACATAGTCAAAACTATGTGCATAAAATTTCAGGAAAAACACATGTTAATCATAC
                      ____________________________________________________________
consensus ATCTTTACATAGTCAAAACTATGTGCATAAAATTTCAGGAAAAACACATGTTAATCATAC
 
. : . : . : . : . : . :
JMFS005G07+ CTGACGCGATAAAGAATCTAATCTTTGATGAGATCTAGCAAAAACAGAAGCGAAATTCGX
JMFS005C02+ CTGACGCGATAAAGAATCTAATCTTTGATGAGATCTAGCAAAAACAGAAGCGAAATNCGX
                      ____________________________________________________________
consensus CTGACGCGATAAAGAATCTAATCTTTGATGAGATCTAGCAAAAACAGAAGCGAAATTCGN
 
. : . : . : . : . : . :
JMFS005G07+ XXXXXXXXXXXXXXXXXXXCGTAAAACTTGAAGAGATCAAAGAATTCCAAGGTCGGAACG
JMFS128H05+ CGTAAAACTTGAAGAGATCAAAGAATTCCAAGGTCGGAACG
JMFS005C02+ XXXXXXXXXXXXXXXXXXXCGTAAAACTTGAAGAGATCAAAGAATTCCAAGGTCGGAACG
JMSF016F06+ CGTAAAACTTGAAGAGATCAAAGAATTCCAAGGTCGGAACG
                      ____________________________________________________________
consensus NNNNNNNNNNNNNNNNNNNCGTAAAACTTGAAGAGATCAAAGAATTCCAAGGTCGGAACG
 
. : . : . : . : . : . :
JMFS005G07+ TGTTTTTACCTTAGGGACCTCAGGGAGGACGTCCCAGCCCAATCGAGGCCGCTTCCGTGG
JMFS128H05+ TGTTTTTACCTTAGGGACCTCAGGGAGGACGTCCCAGCCCAATCGAGACCGCTTCCGTGG
JMFS005C02+ TGTTTTTACCTTAGGGACCTCAGGGAGGACGTCCCAGCCCAATCGAGGCCGCTTCCGTGG
JMSF016F06+ TGTTTTTACCTTAGGGACCTCAGGGAGGACGTCCCAGCCCAATCGAGGCCGCTTCCGTGG
                      ____________________________________________________________
consensus TGTTTTTACCTTAGGGACCTCAGGGAGGACGTCCCAGCCCAATCGAGGCCGCTTCCGTGG
 
. : . : . : . : . : . :
JMFS005G07+ TCGCCGGTCGAGTTGCGGGAGGGGAAACTCGGTCACGCGCTCTGTCTCCATCGTTGCAGA
JMFS128H05+ TCGCCGGTCGAG
JMFS005C02+ TCGCCGGTCGAGTTGCGGGAGGGGAAACTCGGTCACGCGCTCTGTCTCCATCGTTGCAGA
JMSF016F06+ TCGCCGGTCGAGTTGCGGGAGGGGAAACTCGGTCACGCGCTCTGTCTCCATCGTTGCAGA
                      ____________________________________________________________
consensus TCGCCGGTCGAGTTGCGGGAGGGGAAACTCGGTCACGCGCTCTGTCTCCATCGTTGCAGA
 
. : . : . : . : . : . :
JMFS005G07+ GAAATTTAGAAAGAGAGAGAAAGTTGAAGGAGATGATGATAGA
JMFS005C02+ GAAATTTAGAAAGAGAGAGAAAGTTGAAGGAGATGATGATAGA
JMSF016F06+ GAAATTTAGAAAGAGAGAGAAAGTTGAAGGAGATGATGATAGAGAGAATAAGGATGCGCC
                      ____________________________________________________________
consensus GAAATTTAGAAAGAGAGAGAAAGTTGAAGGAGATGATGATAGAGAGAATAAGGATGCGCC